RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 KRTAP10-12P60413 245 aa3.04□□□□□ -1.92
AC004540.1-206ENST00000448056 KRTAP6-3Q3LI67 103 aa3.04□□□□□ -1.92
AC004540.1-206ENST00000448056 K7ERS5 55 aa3□□□□□ -1.93
AC004540.1-206ENST00000448056 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
AC004540.1-206ENST00000448056 C10orf95Q9H7T3 257 aa2.98□□□□□ -1.93
AC004540.1-206ENST00000448056 CDC42SE1Q9NRR8 79 aa2.98□□□□□ -1.93
AC004540.1-206ENST00000448056 KMT2DO14686 5537 aa2.94□□□□□ -1.94
AC004540.1-206ENST00000448056 KRTAP8-1Q8IUC2 63 aa2.93□□□□□ -1.94
AC004540.1-206ENST00000448056 TNP1P09430 55 aa2.92□□□□□ -1.94
AC004540.1-206ENST00000448056 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
AC004540.1-206ENST00000448056 MUC12Q9UKN1 5478 aa2.9□□□□□ -1.94
AC004540.1-206ENST00000448056 NEBP20929 6669 aa2.89□□□□□ -1.95
AC004540.1-206ENST00000448056 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
AC004540.1-206ENST00000448056 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
AC004540.1-206ENST00000448056 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
AC004540.1-206ENST00000448056 SPRR2FQ96RM1 72 aa2.87□□□□□ -1.95
AC004540.1-206ENST00000448056 KRTAP25-1Q3LHN0 102 aa2.86□□□□□ -1.95
AC004540.1-206ENST00000448056 BRK1Q8WUW1 75 aa2.86□□□□□ -1.95
AC004540.1-206ENST00000448056 ROMO1P60602 79 aa2.84□□□□□ -1.95
AC004540.1-206ENST00000448056 MDN1Q9NU22 5596 aa2.83□□□□□ -1.96
AC004540.1-206ENST00000448056 LCE3AQ5TA76 89 aa2.83□□□□□ -1.96
AC004540.1-206ENST00000448056 KRTAP19-7Q3SYF9 63 aa2.82□□□□□ -1.96
AC004540.1-206ENST00000448056 KRTAP19-5Q3LI72 72 aa2.81□□□□□ -1.96
AC004540.1-206ENST00000448056 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
AC004540.1-206ENST00000448056 MT1EP04732 61 aa2.78□□□□□ -1.96
AC004540.1-206ENST00000448056 SPRR2EP22531 72 aa2.78□□□□□ -1.96
AC004540.1-206ENST00000448056 SPRR2BP35325 72 aa2.78□□□□□ -1.96
AC004540.1-206ENST00000448056 SPRR2AP35326 72 aa2.78□□□□□ -1.96
AC004540.1-206ENST00000448056 KRTAP2-3P0C7H8 128 aa2.77□□□□□ -1.97
AC004540.1-206ENST00000448056 KRTAP2-4Q9BYR9 128 aa2.77□□□□□ -1.97
AC004540.1-206ENST00000448056 KRTAP12-3P60328 96 aa2.74□□□□□ -1.97
AC004540.1-206ENST00000448056 PMAIP1Q13794 54 aa2.72□□□□□ -1.97
AC004540.1-206ENST00000448056 PP632Q6XCG6 107 aa2.72□□□□□ -1.97
AC004540.1-206ENST00000448056 KRTAP19-3Q7Z4W3 81 aa2.71□□□□□ -1.98
AC004540.1-206ENST00000448056 PRO0628Q9UI54 55 aa2.7□□□□□ -1.98
AC004540.1-206ENST00000448056 SPRR2DP22532 72 aa2.69□□□□□ -1.98
AC004540.1-206ENST00000448056 MT1LQ93083 61 aa2.69□□□□□ -1.98
AC004540.1-206ENST00000448056 MT1GP13640 62 aa2.68□□□□□ -1.98
AC004540.1-206ENST00000448056 KRTAP2-1Q9BYU5 128 aa2.67□□□□□ -1.98
AC004540.1-206ENST00000448056 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
AC004540.1-206ENST00000448056 MT1MQ8N339 61 aa2.63□□□□□ -1.99
AC004540.1-206ENST00000448056 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
AC004540.1-206ENST00000448056 KRTAP4-3Q9BYR4 195 aa2.57□□□□□ -2
AC004540.1-206ENST00000448056 DSTQ03001 7570 aaKnown RBP2.54□□□□□ -2
AC004540.1-206ENST00000448056 KTN1-AS1Q86SY8 53 aa2.51□□□□□ -2.01
AC004540.1-206ENST00000448056 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
AC004540.1-206ENST00000448056 KRTAP5-5Q701N2 237 aaPredicted RBP2.4□□□□□ -2.03
AC004540.1-206ENST00000448056 GPR98Q8WXG9 6306 aa2.39□□□□□ -2.03
AC004540.1-206ENST00000448056 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
AC004540.1-206ENST00000448056 MT4P47944 62 aa2.38□□□□□ -2.03
AC004540.1-206ENST00000448056 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
AC004540.1-206ENST00000448056 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
AC004540.1-206ENST00000448056 SPRR5A0A1B0GTR4 108 aa2.32□□□□□ -2.04
AC004540.1-206ENST00000448056 MT1AP04731 61 aa2.29□□□□□ -2.04
AC004540.1-206ENST00000448056 KRTAP12-4P60329 112 aa2.28□□□□□ -2.04
AC004540.1-206ENST00000448056 AHNAK2Q8IVF2 5795 aa2.28□□□□□ -2.04
AC004540.1-206ENST00000448056 KRTAP6-1Q3LI64 71 aa2.27□□□□□ -2.05
AC004540.1-206ENST00000448056 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
AC004540.1-206ENST00000448056 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
AC004540.1-206ENST00000448056 SYNE1Q8NF91 8797 aaKnown RBP2.23□□□□□ -2.05
AC004540.1-206ENST00000448056 OBSCNQ5VST9 7968 aa2.21□□□□□ -2.05
AC004540.1-206ENST00000448056 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
AC004540.1-206ENST00000448056 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
AC004540.1-206ENST00000448056 KRTAP6-2Q3LI66 62 aa2.13□□□□□ -2.07
AC004540.1-206ENST00000448056 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
AC004540.1-206ENST00000448056 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
AC004540.1-206ENST00000448056 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
AC004540.1-206ENST00000448056 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
AC004540.1-206ENST00000448056 MUC5ACP98088 5654 aa1.89□□□□□ -2.11
AC004540.1-206ENST00000448056 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
AC004540.1-206ENST00000448056 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
AC004540.1-206ENST00000448056 INE1O15225 51 aa1.7□□□□□ -2.14
AC004540.1-206ENST00000448056 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
AC004540.1-206ENST00000448056 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
AC004540.1-206ENST00000448056 PRM1P04553 51 aa1.46□□□□□ -2.18
AC004540.1-206ENST00000448056 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
AC004540.1-206ENST00000448056 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
AC004540.1-206ENST00000448056 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 147.3 ms