RNA–Protein interactions for RNA: ENST00000444191.5

HCFC1-203, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-203ENST00000444191 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.78
HCFC1-203ENST00000444191 KRTAP19-7Q3SYF9 63 aa3.95□□□□□ -1.78
HCFC1-203ENST00000444191 MUC12Q9UKN1 5478 aa3.95□□□□□ -1.78
HCFC1-203ENST00000444191 MT1LQ93083 61 aa3.91□□□□□ -1.78
HCFC1-203ENST00000444191 MT1EP04732 61 aa3.88□□□□□ -1.79
HCFC1-203ENST00000444191 SSPOA2VEC9 5147 aa3.83□□□□□ -1.8
HCFC1-203ENST00000444191 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
HCFC1-203ENST00000444191 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
HCFC1-203ENST00000444191 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
HCFC1-203ENST00000444191 KRTAP2-3P0C7H8 128 aa3.8□□□□□ -1.8
HCFC1-203ENST00000444191 KRTAP2-4Q9BYR9 128 aa3.8□□□□□ -1.8
HCFC1-203ENST00000444191 KRTAP2-1Q9BYU5 128 aa3.8□□□□□ -1.8
HCFC1-203ENST00000444191 SYNE2Q8WXH0 6885 aaKnown RBP3.78□□□□□ -1.8
HCFC1-203ENST00000444191 KRTAP4-9Q9BYQ8 210 aa3.7□□□□□ -1.82
HCFC1-203ENST00000444191 MT1MQ8N339 61 aa3.66□□□□□ -1.82
HCFC1-203ENST00000444191 KRTAP19-3Q7Z4W3 81 aa3.66□□□□□ -1.82
HCFC1-203ENST00000444191 KRTAP9-6A0A140TA67 174 aa3.6□□□□□ -1.83
HCFC1-203ENST00000444191 MACF1Q9UPN3 7388 aaKnown RBP3.58□□□□□ -1.84
HCFC1-203ENST00000444191 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
HCFC1-203ENST00000444191 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
HCFC1-203ENST00000444191 KRTAP9-2Q9BYQ4 174 aa3.56□□□□□ -1.84
HCFC1-203ENST00000444191 LCE3DQ9BYE3 92 aa3.48□□□□□ -1.85
HCFC1-203ENST00000444191 MDN1Q9NU22 5596 aa3.47□□□□□ -1.85
HCFC1-203ENST00000444191 LCE4AQ5TA78 99 aa3.42□□□□□ -1.86
HCFC1-203ENST00000444191 KRTAP6-1Q3LI64 71 aa3.4□□□□□ -1.86
HCFC1-203ENST00000444191 LCE3EQ5T5B0 92 aa3.4□□□□□ -1.86
HCFC1-203ENST00000444191 PRM1P04553 51 aa3.39□□□□□ -1.87
HCFC1-203ENST00000444191 SPRR2EP22531 72 aa3.39□□□□□ -1.87
HCFC1-203ENST00000444191 SPRR2BP35325 72 aa3.39□□□□□ -1.87
HCFC1-203ENST00000444191 SPRR2AP35326 72 aa3.39□□□□□ -1.87
HCFC1-203ENST00000444191 LCE5AQ5TCM9 118 aa3.37□□□□□ -1.87
HCFC1-203ENST00000444191 KRTAP9-7A8MTY7 169 aa3.35□□□□□ -1.87
HCFC1-203ENST00000444191 MT1AP04731 61 aa3.25□□□□□ -1.89
HCFC1-203ENST00000444191 SPRR2DP22532 72 aa3.21□□□□□ -1.89
HCFC1-203ENST00000444191 LCE1AQ5T7P2 110 aa3.18□□□□□ -1.9
HCFC1-203ENST00000444191 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.9
HCFC1-203ENST00000444191 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
HCFC1-203ENST00000444191 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.09□□□□□ -1.91
HCFC1-203ENST00000444191 MT3P25713 68 aa3.06□□□□□ -1.92
HCFC1-203ENST00000444191 KRTAP6-3Q3LI67 103 aa3.05□□□□□ -1.92
HCFC1-203ENST00000444191 MUC19Q7Z5P9 8384 aa3.05□□□□□ -1.92
HCFC1-203ENST00000444191 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
HCFC1-203ENST00000444191 MT4P47944 62 aa3.04□□□□□ -1.92
HCFC1-203ENST00000444191 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
HCFC1-203ENST00000444191 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
HCFC1-203ENST00000444191 KRTAP4-6Q9BYQ5 205 aa2.97□□□□□ -1.93
HCFC1-203ENST00000444191 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
HCFC1-203ENST00000444191 KRTAP2-2Q9BYT5 123 aa2.9□□□□□ -1.95
HCFC1-203ENST00000444191 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
HCFC1-203ENST00000444191 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
HCFC1-203ENST00000444191 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
HCFC1-203ENST00000444191 NEBP20929 6669 aa2.8□□□□□ -1.96
HCFC1-203ENST00000444191 KRTAP20-1Q3LI63 56 aa2.8□□□□□ -1.96
HCFC1-203ENST00000444191 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
HCFC1-203ENST00000444191 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
HCFC1-203ENST00000444191 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
HCFC1-203ENST00000444191 MUC5ACP98088 5654 aa2.58□□□□□ -2
HCFC1-203ENST00000444191 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
HCFC1-203ENST00000444191 HMCN1Q96RW7 5635 aa2.56□□□□□ -2
HCFC1-203ENST00000444191 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
HCFC1-203ENST00000444191 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
HCFC1-203ENST00000444191 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
HCFC1-203ENST00000444191 KRTAP5-3Q6L8H2 238 aa2.38□□□□□ -2.03
HCFC1-203ENST00000444191 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
HCFC1-203ENST00000444191 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
HCFC1-203ENST00000444191 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
HCFC1-203ENST00000444191 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
HCFC1-203ENST00000444191 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.06
HCFC1-203ENST00000444191 KRTAP5-1Q6L8H4 278 aa2.11□□□□□ -2.07
HCFC1-203ENST00000444191 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
HCFC1-203ENST00000444191 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
HCFC1-203ENST00000444191 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
HCFC1-203ENST00000444191 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
HCFC1-203ENST00000444191 KRTAP21-1Q3LI58 79 aa1.94□□□□□ -2.1
HCFC1-203ENST00000444191 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
HCFC1-203ENST00000444191 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
HCFC1-203ENST00000444191 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
HCFC1-203ENST00000444191 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 9.9 ms