RNA–Protein interactions for RNA: ENST00000443945.6

LRCH1-204, Transcript of leucine rich repeats and calponin homology domain containing 1, humanhuman

TSL 1 (best)

Gene LRCH1, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1-204ENST00000443945 SPRR2BP35325 72 aa7.04□□□□□ -1.28
LRCH1-204ENST00000443945 SPRR2AP35326 72 aa7.04□□□□□ -1.28
LRCH1-204ENST00000443945 LCE1AQ5T7P2 110 aa6.98□□□□□ -1.29
LRCH1-204ENST00000443945 KRTAP20-1Q3LI63 56 aa6.92□□□□□ -1.3
LRCH1-204ENST00000443945 PP632Q6XCG6 107 aa6.91□□□□□ -1.3
LRCH1-204ENST00000443945 TNP1P09430 55 aa6.87□□□□□ -1.31
LRCH1-204ENST00000443945 KRTAP19-7Q3SYF9 63 aa6.81□□□□□ -1.32
LRCH1-204ENST00000443945 SPRR2DP22532 72 aa6.8□□□□□ -1.32
LRCH1-204ENST00000443945 KRTAP2-3P0C7H8 128 aa6.77□□□□□ -1.33
LRCH1-204ENST00000443945 KRTAP2-4Q9BYR9 128 aa6.77□□□□□ -1.33
LRCH1-204ENST00000443945 INE1O15225 51 aa6.74□□□□□ -1.33
LRCH1-204ENST00000443945 MT1EP04732 61 aa6.72□□□□□ -1.33
LRCH1-204ENST00000443945 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.34
LRCH1-204ENST00000443945 LCE3AQ5TA76 89 aa6.7□□□□□ -1.34
LRCH1-204ENST00000443945 KRTAP19-3Q7Z4W3 81 aa6.61□□□□□ -1.35
LRCH1-204ENST00000443945 LCE5AQ5TCM9 118 aa6.59□□□□□ -1.35
LRCH1-204ENST00000443945 LCE3BQ5TA77 95 aa6.59□□□□□ -1.35
LRCH1-204ENST00000443945 KRTAP2-2Q9BYT5 123 aa6.57□□□□□ -1.36
LRCH1-204ENST00000443945 KRTAP2-1Q9BYU5 128 aa6.57□□□□□ -1.36
LRCH1-204ENST00000443945 DSTQ03001 7570 aaKnown RBP6.52□□□□□ -1.37
LRCH1-204ENST00000443945 MT1LQ93083 61 aa6.46□□□□□ -1.37
LRCH1-204ENST00000443945 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
LRCH1-204ENST00000443945 MT1GP13640 62 aa6.45□□□□□ -1.38
LRCH1-204ENST00000443945 SPRR5A0A1B0GTR4 108 aa6.43□□□□□ -1.38
LRCH1-204ENST00000443945 MT1MQ8N339 61 aa6.38□□□□□ -1.39
LRCH1-204ENST00000443945 KRTAP4-3Q9BYR4 195 aa6.32□□□□□ -1.4
LRCH1-204ENST00000443945 KRTAP4-7Q9BYR0 210 aa6.26□□□□□ -1.41
LRCH1-204ENST00000443945 KRTAP19-4Q3LI73 84 aa6.17□□□□□ -1.42
LRCH1-204ENST00000443945 KRTAP4-9Q9BYQ8 210 aa6.15□□□□□ -1.42
LRCH1-204ENST00000443945 LCE1DQ5T752 114 aa5.98□□□□□ -1.45
LRCH1-204ENST00000443945 MT4P47944 62 aa5.98□□□□□ -1.45
LRCH1-204ENST00000443945 LCE3CQ5T5A8 94 aa5.96□□□□□ -1.46
LRCH1-204ENST00000443945 KRTAP9-4Q9BYQ2 154 aa5.96□□□□□ -1.46
LRCH1-204ENST00000443945 LCE4AQ5TA78 99 aa5.95□□□□□ -1.46
LRCH1-204ENST00000443945 HMCN1Q96RW7 5635 aa5.95□□□□□ -1.46
LRCH1-204ENST00000443945 KRTAP5-4Q6L8H1 288 aa5.92□□□□□ -1.46
LRCH1-204ENST00000443945 LOC100996750A0A140TA64 210 aa5.91□□□□□ -1.46
LRCH1-204ENST00000443945 KRTAP4-6Q9BYQ5 205 aa5.83□□□□□ -1.48
LRCH1-204ENST00000443945 KRTAP5-5Q701N2 237 aaPredicted RBP5.82□□□□□ -1.48
LRCH1-204ENST00000443945 LCE1FQ5T754 118 aa5.73□□□□□ -1.49
LRCH1-204ENST00000443945 GPR98Q8WXG9 6306 aa5.69□□□□□ -1.5
LRCH1-204ENST00000443945 KRTAP9-9Q9BYP9 154 aa5.66□□□□□ -1.5
LRCH1-204ENST00000443945 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
LRCH1-204ENST00000443945 KRTAP9-6A8MVA2 160 aa5.63□□□□□ -1.51
LRCH1-204ENST00000443945 KRTAP20-2Q3LI61 65 aa5.6□□□□□ -1.51
LRCH1-204ENST00000443945 AHNAK2Q8IVF2 5795 aa5.59□□□□□ -1.51
LRCH1-204ENST00000443945 KRTAP12-4P60329 112 aa5.59□□□□□ -1.52
LRCH1-204ENST00000443945 KRTAP6-1Q3LI64 71 aa5.49□□□□□ -1.53
LRCH1-204ENST00000443945 MT1AP04731 61 aa5.47□□□□□ -1.53
LRCH1-204ENST00000443945 KRTAP5-10Q6L8G5 202 aa5.41□□□□□ -1.54
LRCH1-204ENST00000443945 KRTAP5-3Q6L8H2 238 aa5.41□□□□□ -1.54
LRCH1-204ENST00000443945 MT3P25713 68 aa5.34□□□□□ -1.55
LRCH1-204ENST00000443945 LCE1EQ5T753 118 aa5.27□□□□□ -1.57
LRCH1-204ENST00000443945 KRTAP5-2Q701N4 177 aa5.22□□□□□ -1.57
LRCH1-204ENST00000443945 KRTAP6-2Q3LI66 62 aa5.2□□□□□ -1.58
LRCH1-204ENST00000443945 KRTAP5-7Q6L8G8 165 aa5.12□□□□□ -1.59
LRCH1-204ENST00000443945 OBSCNQ5VST9 7968 aa5.09□□□□□ -1.59
LRCH1-204ENST00000443945 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
LRCH1-204ENST00000443945 KRTAP5-8O75690 187 aa4.88□□□□□ -1.63
LRCH1-204ENST00000443945 LCE3EQ5T5B0 92 aa4.88□□□□□ -1.63
LRCH1-204ENST00000443945 KRTAP5-1Q6L8H4 278 aa4.67□□□□□ -1.66
LRCH1-204ENST00000443945 MUC5BQ9HC84 5762 aaPredicted RBP4.61□□□□□ -1.67
LRCH1-204ENST00000443945 MUC5ACP98088 5654 aa4.6□□□□□ -1.67
LRCH1-204ENST00000443945 LCE3DQ9BYE3 92 aa4.57□□□□□ -1.68
LRCH1-204ENST00000443945 AHNAKQ09666 5890 aaKnown RBP4.49□□□□□ -1.69
LRCH1-204ENST00000443945 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
LRCH1-204ENST00000443945 KRTAP4-2Q9BYR5 136 aa4.28□□□□□ -1.72
LRCH1-204ENST00000443945 PRM1P04553 51 aa4.2□□□□□ -1.74
LRCH1-204ENST00000443945 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
LRCH1-204ENST00000443945 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
LRCH1-204ENST00000443945 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
LRCH1-204ENST00000443945 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
LRCH1-204ENST00000443945 KRTAP21-2Q3LI59 83 aa3.59□□□□□ -1.83
LRCH1-204ENST00000443945 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
LRCH1-204ENST00000443945 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
LRCH1-204ENST00000443945 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
LRCH1-204ENST00000443945 KRTAP21-1Q3LI58 79 aa2.66□□□□□ -1.98
LRCH1-204ENST00000443945 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 11.1 ms