RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 PMAIP1Q13794 54 aa4.95□□□□□ -1.62
TM9SF4-204ENST00000442842 KRTAP23-1A1A580 65 aa4.93□□□□□ -1.62
TM9SF4-204ENST00000442842 KRTAP12-3P60328 96 aa4.93□□□□□ -1.62
TM9SF4-204ENST00000442842 PP632Q6XCG6 107 aa4.89□□□□□ -1.63
TM9SF4-204ENST00000442842 KRTAP19-3Q7Z4W3 81 aa4.89□□□□□ -1.63
TM9SF4-204ENST00000442842 SPRR2DP22532 72 aa4.87□□□□□ -1.63
TM9SF4-204ENST00000442842 MT1LQ93083 61 aa4.85□□□□□ -1.63
TM9SF4-204ENST00000442842 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
TM9SF4-204ENST00000442842 MT1GP13640 62 aa4.78□□□□□ -1.64
TM9SF4-204ENST00000442842 KRTAP20-1Q3LI63 56 aa4.76□□□□□ -1.65
TM9SF4-204ENST00000442842 MT1MQ8N339 61 aa4.74□□□□□ -1.65
TM9SF4-204ENST00000442842 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
TM9SF4-204ENST00000442842 PRAC1Q96KF2 57 aa4.72□□□□□ -1.65
TM9SF4-204ENST00000442842 KRTAP2-3P0C7H8 128 aa4.7□□□□□ -1.66
TM9SF4-204ENST00000442842 KRTAP2-4Q9BYR9 128 aa4.7□□□□□ -1.66
TM9SF4-204ENST00000442842 LCE3BQ5TA77 95 aa4.69□□□□□ -1.66
TM9SF4-204ENST00000442842 KRTAP4-7Q9BYR0 210 aa4.66□□□□□ -1.66
TM9SF4-204ENST00000442842 KRTAP4-3Q9BYR4 195 aa4.65□□□□□ -1.67
TM9SF4-204ENST00000442842 KTN1-AS1Q86SY8 53 aa4.63□□□□□ -1.67
TM9SF4-204ENST00000442842 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
TM9SF4-204ENST00000442842 KRTAP2-1Q9BYU5 128 aa4.58□□□□□ -1.68
TM9SF4-204ENST00000442842 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
TM9SF4-204ENST00000442842 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
TM9SF4-204ENST00000442842 DSTQ03001 7570 aaKnown RBP4.55□□□□□ -1.68
TM9SF4-204ENST00000442842 LOC100996750A0A140TA64 210 aa4.4□□□□□ -1.71
TM9SF4-204ENST00000442842 KRTAP4-6Q9BYQ5 205 aa4.36□□□□□ -1.71
TM9SF4-204ENST00000442842 KRTAP9-6A8MVA2 160 aa4.3□□□□□ -1.72
TM9SF4-204ENST00000442842 KRTAP5-5Q701N2 237 aaPredicted RBP4.29□□□□□ -1.72
TM9SF4-204ENST00000442842 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
TM9SF4-204ENST00000442842 KRTAP4-9Q9BYQ8 210 aa4.28□□□□□ -1.72
TM9SF4-204ENST00000442842 MT4P47944 62 aa4.25□□□□□ -1.73
TM9SF4-204ENST00000442842 KRTAP5-4Q6L8H1 288 aa4.25□□□□□ -1.73
TM9SF4-204ENST00000442842 LCE1DQ5T752 114 aa4.21□□□□□ -1.74
TM9SF4-204ENST00000442842 HMCN1Q96RW7 5635 aa4.17□□□□□ -1.74
TM9SF4-204ENST00000442842 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
TM9SF4-204ENST00000442842 MT1AP04731 61 aa4.13□□□□□ -1.75
TM9SF4-204ENST00000442842 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
TM9SF4-204ENST00000442842 KRTAP12-4P60329 112 aa4.09□□□□□ -1.75
TM9SF4-204ENST00000442842 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
TM9SF4-204ENST00000442842 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
TM9SF4-204ENST00000442842 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
TM9SF4-204ENST00000442842 KRTAP20-2Q3LI61 65 aa4.03□□□□□ -1.76
TM9SF4-204ENST00000442842 KRTAP9-4Q9BYQ2 154 aa3.93□□□□□ -1.78
TM9SF4-204ENST00000442842 LUZP6Q538Z0 58 aa3.9□□□□□ -1.79
TM9SF4-204ENST00000442842 GPR98Q8WXG9 6306 aa3.88□□□□□ -1.79
TM9SF4-204ENST00000442842 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
TM9SF4-204ENST00000442842 KRTAP6-2Q3LI66 62 aa3.84□□□□□ -1.79
TM9SF4-204ENST00000442842 AHNAK2Q8IVF2 5795 aa3.84□□□□□ -1.8
TM9SF4-204ENST00000442842 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
TM9SF4-204ENST00000442842 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
TM9SF4-204ENST00000442842 MT3P25713 68 aa3.75□□□□□ -1.81
TM9SF4-204ENST00000442842 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
TM9SF4-204ENST00000442842 KRTAP5-10Q6L8G5 202 aa3.68□□□□□ -1.82
TM9SF4-204ENST00000442842 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
TM9SF4-204ENST00000442842 OBSCNQ5VST9 7968 aa3.48□□□□□ -1.85
TM9SF4-204ENST00000442842 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
TM9SF4-204ENST00000442842 KRTAP5-8O75690 187 aa3.43□□□□□ -1.86
TM9SF4-204ENST00000442842 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
TM9SF4-204ENST00000442842 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
TM9SF4-204ENST00000442842 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
TM9SF4-204ENST00000442842 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
TM9SF4-204ENST00000442842 MUC5ACP98088 5654 aa3.3□□□□□ -1.88
TM9SF4-204ENST00000442842 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
TM9SF4-204ENST00000442842 INE1O15225 51 aa3.18□□□□□ -1.9
TM9SF4-204ENST00000442842 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
TM9SF4-204ENST00000442842 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
TM9SF4-204ENST00000442842 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
TM9SF4-204ENST00000442842 AHNAKQ09666 5890 aaKnown RBP3.04□□□□□ -1.92
TM9SF4-204ENST00000442842 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
TM9SF4-204ENST00000442842 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
TM9SF4-204ENST00000442842 PRM1P04553 51 aa2.7□□□□□ -1.98
TM9SF4-204ENST00000442842 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
TM9SF4-204ENST00000442842 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
TM9SF4-204ENST00000442842 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
TM9SF4-204ENST00000442842 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
TM9SF4-204ENST00000442842 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
TM9SF4-204ENST00000442842 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
TM9SF4-204ENST00000442842 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 122.1 ms