RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 MDN1Q9NU22 5596 aa7.55□□□□□ -1.2
VPS13B-204ENST00000441350 LCE1AQ5T7P2 110 aa7.55□□□□□ -1.2
VPS13B-204ENST00000441350 MT1LQ93083 61 aa7.53□□□□□ -1.2
VPS13B-204ENST00000441350 KRTAP15-1Q3LI76 137 aa7.52□□□□□ -1.2
VPS13B-204ENST00000441350 SPRR2EP22531 72 aa7.5□□□□□ -1.21
VPS13B-204ENST00000441350 SPRR2BP35325 72 aa7.5□□□□□ -1.21
VPS13B-204ENST00000441350 SPRR2AP35326 72 aa7.5□□□□□ -1.21
VPS13B-204ENST00000441350 KRTAP19-3Q7Z4W3 81 aa7.5□□□□□ -1.21
VPS13B-204ENST00000441350 LCE5AQ5TCM9 118 aa7.44□□□□□ -1.22
VPS13B-204ENST00000441350 MT1GP13640 62 aa7.42□□□□□ -1.22
VPS13B-204ENST00000441350 NEBP20929 6669 aa7.41□□□□□ -1.22
VPS13B-204ENST00000441350 KRTAP19-4Q3LI73 84 aa7.35□□□□□ -1.23
VPS13B-204ENST00000441350 MT1MQ8N339 61 aa7.31□□□□□ -1.24
VPS13B-204ENST00000441350 SPRR2DP22532 72 aa7.24□□□□□ -1.25
VPS13B-204ENST00000441350 LCE3CQ5T5A8 94 aa7.23□□□□□ -1.25
VPS13B-204ENST00000441350 KRTAP4-7Q9BYR0 210 aa7.23□□□□□ -1.25
VPS13B-204ENST00000441350 H3BS24 57 aa7.15□□□□□ -1.27
VPS13B-204ENST00000441350 KRTAP4-3Q9BYR4 195 aa7.13□□□□□ -1.27
VPS13B-204ENST00000441350 LCE3BQ5TA77 95 aa6.99□□□□□ -1.29
VPS13B-204ENST00000441350 DSTQ03001 7570 aaKnown RBP6.97□□□□□ -1.29
VPS13B-204ENST00000441350 KRTAP2-3P0C7H8 128 aa6.96□□□□□ -1.3
VPS13B-204ENST00000441350 KRTAP2-4Q9BYR9 128 aa6.96□□□□□ -1.3
VPS13B-204ENST00000441350 KRTAP20-1Q3LI63 56 aa6.92□□□□□ -1.3
VPS13B-204ENST00000441350 SPRR5A0A1B0GTR4 108 aa6.9□□□□□ -1.31
VPS13B-204ENST00000441350 KRTAP9-6A8MVA2 160 aa6.85□□□□□ -1.31
VPS13B-204ENST00000441350 KRTAP2-2Q9BYT5 123 aa6.79□□□□□ -1.32
VPS13B-204ENST00000441350 KRTAP2-1Q9BYU5 128 aa6.79□□□□□ -1.32
VPS13B-204ENST00000441350 KRTAP4-12Q9BQ66 201 aa6.76□□□□□ -1.33
VPS13B-204ENST00000441350 KRTAP9-9Q9BYP9 154 aa6.67□□□□□ -1.34
VPS13B-204ENST00000441350 KRTAP9-4Q9BYQ2 154 aa6.67□□□□□ -1.34
VPS13B-204ENST00000441350 KRTAP5-5Q701N2 237 aaPredicted RBP6.65□□□□□ -1.35
VPS13B-204ENST00000441350 KRTAP5-4Q6L8H1 288 aa6.52□□□□□ -1.37
VPS13B-204ENST00000441350 LCE4AQ5TA78 99 aa6.45□□□□□ -1.38
VPS13B-204ENST00000441350 LUZP6Q538Z0 58 aa6.42□□□□□ -1.38
VPS13B-204ENST00000441350 MT1AP04731 61 aa6.41□□□□□ -1.38
VPS13B-204ENST00000441350 LCE1DQ5T752 114 aa6.39□□□□□ -1.39
VPS13B-204ENST00000441350 KRTAP6-1Q3LI64 71 aa6.35□□□□□ -1.39
VPS13B-204ENST00000441350 KRTAP4-9Q9BYQ8 210 aa6.31□□□□□ -1.4
VPS13B-204ENST00000441350 SYNE1Q8NF91 8797 aaKnown RBP6.29□□□□□ -1.4
VPS13B-204ENST00000441350 MT4P47944 62 aa6.28□□□□□ -1.4
VPS13B-204ENST00000441350 KRTAP12-4P60329 112 aa6.23□□□□□ -1.41
VPS13B-204ENST00000441350 NDUFAF8A1L188 74 aa6.21□□□□□ -1.41
VPS13B-204ENST00000441350 HMCN1Q96RW7 5635 aa6.16□□□□□ -1.42
VPS13B-204ENST00000441350 KRTAP4-2Q9BYR5 136 aa6.11□□□□□ -1.43
VPS13B-204ENST00000441350 KRTAP20-2Q3LI61 65 aa6.09□□□□□ -1.43
VPS13B-204ENST00000441350 A0A0A0MQY5 61 aa6.08□□□□□ -1.44
VPS13B-204ENST00000441350 KRTAP4-11Q9BYQ6 195 aa5.96□□□□□ -1.45
VPS13B-204ENST00000441350 KRTAP6-2Q3LI66 62 aa5.9□□□□□ -1.46
VPS13B-204ENST00000441350 KRTAP5-3Q6L8H2 238 aa5.89□□□□□ -1.47
VPS13B-204ENST00000441350 KRTAP5-2Q701N4 177 aa5.86□□□□□ -1.47
VPS13B-204ENST00000441350 MT3P25713 68 aa5.81□□□□□ -1.48
VPS13B-204ENST00000441350 AHNAK2Q8IVF2 5795 aa5.65□□□□□ -1.51
VPS13B-204ENST00000441350 KRTAP5-10Q6L8G5 202 aa5.41□□□□□ -1.54
VPS13B-204ENST00000441350 LCE3DQ9BYE3 92 aa5.37□□□□□ -1.55
VPS13B-204ENST00000441350 GPR98Q8WXG9 6306 aa5.35□□□□□ -1.55
VPS13B-204ENST00000441350 OBSCNQ5VST9 7968 aa5.33□□□□□ -1.56
VPS13B-204ENST00000441350 INE1O15225 51 aa5.19□□□□□ -1.58
VPS13B-204ENST00000441350 KRTAP5-8O75690 187 aa5.18□□□□□ -1.58
VPS13B-204ENST00000441350 LCE3EQ5T5B0 92 aa5.18□□□□□ -1.58
VPS13B-204ENST00000441350 LCE1EQ5T753 118 aa5.16□□□□□ -1.58
VPS13B-204ENST00000441350 KRTAP5-1Q6L8H4 278 aa5.11□□□□□ -1.59
VPS13B-204ENST00000441350 KRTAP5-7Q6L8G8 165 aa5.08□□□□□ -1.6
VPS13B-204ENST00000441350 MUC5ACP98088 5654 aa4.92□□□□□ -1.62
VPS13B-204ENST00000441350 LCE1CQ5T751 118 aa4.8□□□□□ -1.64
VPS13B-204ENST00000441350 LCE1BQ5T7P3 118 aa4.8□□□□□ -1.64
VPS13B-204ENST00000441350 MUC5BQ9HC84 5762 aaPredicted RBP4.52□□□□□ -1.69
VPS13B-204ENST00000441350 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.47□□□□□ -1.69
VPS13B-204ENST00000441350 AHNAKQ09666 5890 aaKnown RBP4.4□□□□□ -1.7
VPS13B-204ENST00000441350 PRM1P04553 51 aa4.35□□□□□ -1.71
VPS13B-204ENST00000441350 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
VPS13B-204ENST00000441350 KRTAP21-2Q3LI59 83 aa4.18□□□□□ -1.74
VPS13B-204ENST00000441350 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
VPS13B-204ENST00000441350 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
VPS13B-204ENST00000441350 PHGR1C9JFL3 82 aa3.66□□□□□ -1.82
VPS13B-204ENST00000441350 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
VPS13B-204ENST00000441350 KRTAP21-1Q3LI58 79 aa2.6□□□□□ -1.99
VPS13B-204ENST00000441350 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 108.1 ms