RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 KRTAP6-3Q3LI67 103 aa7.16□□□□□ -1.26
VRK2-207ENST00000440705 KRTAP19-3Q7Z4W3 81 aa7.1□□□□□ -1.27
VRK2-207ENST00000440705 MUC12Q9UKN1 5478 aa7.09□□□□□ -1.27
VRK2-207ENST00000440705 LCE3CQ5T5A8 94 aa7.08□□□□□ -1.28
VRK2-207ENST00000440705 MT1GP13640 62 aa7.05□□□□□ -1.28
VRK2-207ENST00000440705 LCE5AQ5TCM9 118 aa6.99□□□□□ -1.29
VRK2-207ENST00000440705 SPRR5A0A1B0GTR4 108 aa6.98□□□□□ -1.29
VRK2-207ENST00000440705 LCE1AQ5T7P2 110 aa6.97□□□□□ -1.29
VRK2-207ENST00000440705 KRTAP9-7A8MTY7 169 aa6.95□□□□□ -1.3
VRK2-207ENST00000440705 SPRR2EP22531 72 aa6.93□□□□□ -1.3
VRK2-207ENST00000440705 SPRR2BP35325 72 aa6.93□□□□□ -1.3
VRK2-207ENST00000440705 SPRR2AP35326 72 aa6.93□□□□□ -1.3
VRK2-207ENST00000440705 MT1MQ8N339 61 aa6.93□□□□□ -1.3
VRK2-207ENST00000440705 KRTAP4-7Q9BYR0 210 aa6.92□□□□□ -1.3
VRK2-207ENST00000440705 MDN1Q9NU22 5596 aa6.87□□□□□ -1.31
VRK2-207ENST00000440705 LUZP6Q538Z0 58 aa6.76□□□□□ -1.33
VRK2-207ENST00000440705 KRTAP4-3Q9BYR4 195 aa6.76□□□□□ -1.33
VRK2-207ENST00000440705 SPRR2DP22532 72 aa6.69□□□□□ -1.34
VRK2-207ENST00000440705 LCE3BQ5TA77 95 aa6.68□□□□□ -1.34
VRK2-207ENST00000440705 KRTAP9-6A8MVA2 160 aa6.65□□□□□ -1.35
VRK2-207ENST00000440705 KRTAP4-12Q9BQ66 201 aa6.61□□□□□ -1.35
VRK2-207ENST00000440705 NEBP20929 6669 aa6.59□□□□□ -1.36
VRK2-207ENST00000440705 DSTQ03001 7570 aaKnown RBP6.53□□□□□ -1.36
VRK2-207ENST00000440705 KRTAP9-9Q9BYP9 154 aa6.52□□□□□ -1.37
VRK2-207ENST00000440705 KRTAP9-4Q9BYQ2 154 aa6.52□□□□□ -1.37
VRK2-207ENST00000440705 NDUFAF8A1L188 74 aa6.48□□□□□ -1.37
VRK2-207ENST00000440705 KRTAP2-3P0C7H8 128 aa6.28□□□□□ -1.4
VRK2-207ENST00000440705 KRTAP2-4Q9BYR9 128 aa6.28□□□□□ -1.4
VRK2-207ENST00000440705 KRTAP5-5Q701N2 237 aaPredicted RBP6.26□□□□□ -1.41
VRK2-207ENST00000440705 LCE1DQ5T752 114 aa6.24□□□□□ -1.41
VRK2-207ENST00000440705 KRTAP20-1Q3LI63 56 aa6.17□□□□□ -1.42
VRK2-207ENST00000440705 KRTAP2-2Q9BYT5 123 aa6.15□□□□□ -1.42
VRK2-207ENST00000440705 KRTAP2-1Q9BYU5 128 aa6.15□□□□□ -1.42
VRK2-207ENST00000440705 MT1AP04731 61 aa6.13□□□□□ -1.43
VRK2-207ENST00000440705 KRTAP4-9Q9BYQ8 210 aa6.07□□□□□ -1.44
VRK2-207ENST00000440705 KRTAP6-1Q3LI64 71 aa6.05□□□□□ -1.44
VRK2-207ENST00000440705 KRTAP5-4Q6L8H1 288 aa6.03□□□□□ -1.44
VRK2-207ENST00000440705 KRTAP4-2Q9BYR5 136 aa5.98□□□□□ -1.45
VRK2-207ENST00000440705 LCE4AQ5TA78 99 aa5.95□□□□□ -1.46
VRK2-207ENST00000440705 KRTAP12-4P60329 112 aa5.88□□□□□ -1.47
VRK2-207ENST00000440705 KRTAP4-11Q9BYQ6 195 aa5.83□□□□□ -1.48
VRK2-207ENST00000440705 SYNE1Q8NF91 8797 aaKnown RBP5.83□□□□□ -1.48
VRK2-207ENST00000440705 MT4P47944 62 aa5.79□□□□□ -1.48
VRK2-207ENST00000440705 H3BS24 57 aa5.72□□□□□ -1.49
VRK2-207ENST00000440705 A0A0A0MQY5 61 aa5.7□□□□□ -1.5
VRK2-207ENST00000440705 KRTAP20-2Q3LI61 65 aa5.63□□□□□ -1.51
VRK2-207ENST00000440705 KRTAP6-2Q3LI66 62 aa5.59□□□□□ -1.51
VRK2-207ENST00000440705 MT3P25713 68 aa5.58□□□□□ -1.52
VRK2-207ENST00000440705 HMCN1Q96RW7 5635 aa5.55□□□□□ -1.52
VRK2-207ENST00000440705 KRTAP5-3Q6L8H2 238 aa5.48□□□□□ -1.53
VRK2-207ENST00000440705 KRTAP5-2Q701N4 177 aa5.45□□□□□ -1.54
VRK2-207ENST00000440705 INE1O15225 51 aa5.37□□□□□ -1.55
VRK2-207ENST00000440705 LCE3DQ9BYE3 92 aa5.31□□□□□ -1.56
VRK2-207ENST00000440705 LCE3EQ5T5B0 92 aa5.15□□□□□ -1.58
VRK2-207ENST00000440705 OBSCNQ5VST9 7968 aa5.05□□□□□ -1.6
VRK2-207ENST00000440705 AHNAK2Q8IVF2 5795 aa4.95□□□□□ -1.62
VRK2-207ENST00000440705 LCE1EQ5T753 118 aa4.87□□□□□ -1.63
VRK2-207ENST00000440705 KRTAP5-10Q6L8G5 202 aa4.78□□□□□ -1.64
VRK2-207ENST00000440705 KRTAP5-1Q6L8H4 278 aa4.72□□□□□ -1.65
VRK2-207ENST00000440705 KRTAP5-8O75690 187 aa4.71□□□□□ -1.66
VRK2-207ENST00000440705 KRTAP5-7Q6L8G8 165 aa4.57□□□□□ -1.68
VRK2-207ENST00000440705 LCE1BQ5T7P3 118 aa4.54□□□□□ -1.68
VRK2-207ENST00000440705 GPR98Q8WXG9 6306 aa4.54□□□□□ -1.68
VRK2-207ENST00000440705 LCE1CQ5T751 118 aa4.53□□□□□ -1.68
VRK2-207ENST00000440705 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
VRK2-207ENST00000440705 PRM1P04553 51 aa4.43□□□□□ -1.7
VRK2-207ENST00000440705 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
VRK2-207ENST00000440705 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
VRK2-207ENST00000440705 MUC5BQ9HC84 5762 aaPredicted RBP3.97□□□□□ -1.77
VRK2-207ENST00000440705 KRTAP21-2Q3LI59 83 aa3.97□□□□□ -1.77
VRK2-207ENST00000440705 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
VRK2-207ENST00000440705 LCE1FQ5T754 118 aa3.66□□□□□ -1.82
VRK2-207ENST00000440705 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
VRK2-207ENST00000440705 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
VRK2-207ENST00000440705 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
VRK2-207ENST00000440705 KRTAP21-1Q3LI58 79 aa2.69□□□□□ -1.98
VRK2-207ENST00000440705 MUC16Q8WXI7 14507 aa2.21□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 565.5 ms