RNA–Protein interactions for RNA: ENST00000440647.1

CHD6-204, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 3

Gene CHD6, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-204ENST00000440647 KRTAP19-6Q3LI70 58 aa2.81□□□□□ -1.96
CHD6-204ENST00000440647 SPATA8Q6RVD6 105 aa2.8□□□□□ -1.96
CHD6-204ENST00000440647 LINC00208Q96KT6 92 aa2.79□□□□□ -1.96
CHD6-204ENST00000440647 MACF1Q9UPN3 7388 aaKnown RBP2.78□□□□□ -1.96
CHD6-204ENST00000440647 NREPQ16612 68 aa2.78□□□□□ -1.96
CHD6-204ENST00000440647 H1FX-AS1Q4G0G2 97 aa2.77□□□□□ -1.97
CHD6-204ENST00000440647 SYNE2Q8WXH0 6885 aaKnown RBP2.76□□□□□ -1.97
CHD6-204ENST00000440647 MRPL34Q9BQ48 92 aaKnown RBP2.76□□□□□ -1.97
CHD6-204ENST00000440647 LCE3DQ9BYE3 92 aa2.75□□□□□ -1.97
CHD6-204ENST00000440647 KRTAP6-3Q3LI67 103 aa2.74□□□□□ -1.97
CHD6-204ENST00000440647 COA5Q86WW8 74 aa2.74□□□□□ -1.97
CHD6-204ENST00000440647 MMP24-AS1A0A0U1RRL7 71 aa2.73□□□□□ -1.97
CHD6-204ENST00000440647 K7EQZ3 153 aa2.72□□□□□ -1.97
CHD6-204ENST00000440647 UBL5Q9BZL1 73 aa2.71□□□□□ -1.98
CHD6-204ENST00000440647 ACYP2P14621 99 aa2.7□□□□□ -1.98
CHD6-204ENST00000440647 PP632Q6XCG6 107 aa2.7□□□□□ -1.98
CHD6-204ENST00000440647 S4R3F8 94 aa2.66□□□□□ -1.98
CHD6-204ENST00000440647 KRTAP5-8O75690 187 aa2.64□□□□□ -1.99
CHD6-204ENST00000440647 A0A1B0GU69 56 aa2.63□□□□□ -1.99
CHD6-204ENST00000440647 MT1BP07438 61 aa2.62□□□□□ -1.99
CHD6-204ENST00000440647 KRTAP20-1Q3LI63 56 aa2.62□□□□□ -1.99
CHD6-204ENST00000440647 KRTAP19-8Q3LI54 63 aa2.61□□□□□ -1.99
CHD6-204ENST00000440647 SPRR2GQ9BYE4 73 aa2.61□□□□□ -1.99
CHD6-204ENST00000440647 NEBP20929 6669 aa2.59□□□□□ -1.99
CHD6-204ENST00000440647 PLAC4Q8WY50 150 aa2.59□□□□□ -1.99
CHD6-204ENST00000440647 MUC12Q9UKN1 5478 aa2.58□□□□□ -2
CHD6-204ENST00000440647 TP53AIP1Q9HCN2 124 aa2.58□□□□□ -2
CHD6-204ENST00000440647 CRIPTQ9P021 101 aa2.57□□□□□ -2
CHD6-204ENST00000440647 KRTAP2-3P0C7H8 128 aa2.51□□□□□ -2.01
CHD6-204ENST00000440647 KRTAP2-4Q9BYR9 128 aa2.51□□□□□ -2.01
CHD6-204ENST00000440647 SPRR5A0A1B0GTR4 108 aa2.5□□□□□ -2.01
CHD6-204ENST00000440647 SPRR2EP22531 72 aa2.5□□□□□ -2.01
CHD6-204ENST00000440647 SPRR2BP35325 72 aa2.5□□□□□ -2.01
CHD6-204ENST00000440647 SPRR2AP35326 72 aa2.5□□□□□ -2.01
CHD6-204ENST00000440647 SPRR2FQ96RM1 72 aa2.5□□□□□ -2.01
CHD6-204ENST00000440647 H0YAA0 97 aa2.49□□□□□ -2.01
CHD6-204ENST00000440647 KMT2DO14686 5537 aa2.47□□□□□ -2.01
CHD6-204ENST00000440647 KRTAP13-4Q3LI77 160 aa2.46□□□□□ -2.02
CHD6-204ENST00000440647 KRTAP8-1Q8IUC2 63 aa2.46□□□□□ -2.02
CHD6-204ENST00000440647 MDN1Q9NU22 5596 aa2.45□□□□□ -2.02
CHD6-204ENST00000440647 MT1XP80297 61 aa2.43□□□□□ -2.02
CHD6-204ENST00000440647 KRTAP2-1Q9BYU5 128 aa2.42□□□□□ -2.02
CHD6-204ENST00000440647 M0QZ58 72 aa2.41□□□□□ -2.02
CHD6-204ENST00000440647 SPRR2DP22532 72 aa2.41□□□□□ -2.02
CHD6-204ENST00000440647 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
CHD6-204ENST00000440647 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
CHD6-204ENST00000440647 KRTAP12-1P59990 96 aa2.19□□□□□ -2.06
CHD6-204ENST00000440647 KRTAP19-3Q7Z4W3 81 aa2.19□□□□□ -2.06
CHD6-204ENST00000440647 MT1EP04732 61 aa2.17□□□□□ -2.06
CHD6-204ENST00000440647 KRTAP19-7Q3SYF9 63 aa2.17□□□□□ -2.06
CHD6-204ENST00000440647 DSTQ03001 7570 aaKnown RBP2.15□□□□□ -2.07
CHD6-204ENST00000440647 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
CHD6-204ENST00000440647 A0A0D9SG42 100 aa2.14□□□□□ -2.07
CHD6-204ENST00000440647 MT1GP13640 62 aa2.12□□□□□ -2.07
CHD6-204ENST00000440647 MT4P47944 62 aa2.12□□□□□ -2.07
CHD6-204ENST00000440647 KRTAP19-5Q3LI72 72 aa2.11□□□□□ -2.07
CHD6-204ENST00000440647 C10orf95Q9H7T3 257 aa2.1□□□□□ -2.07
CHD6-204ENST00000440647 MT1MQ8N339 61 aa2.08□□□□□ -2.08
CHD6-204ENST00000440647 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
CHD6-204ENST00000440647 MT1LQ93083 61 aa2.06□□□□□ -2.08
CHD6-204ENST00000440647 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
CHD6-204ENST00000440647 TNP1P09430 55 aa2.03□□□□□ -2.08
CHD6-204ENST00000440647 KRTAP5-10Q6L8G5 202 aa2.02□□□□□ -2.09
CHD6-204ENST00000440647 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
CHD6-204ENST00000440647 AHNAK2Q8IVF2 5795 aa1.97□□□□□ -2.09
CHD6-204ENST00000440647 KRTAP12-3P60328 96 aa1.95□□□□□ -2.1
CHD6-204ENST00000440647 KRTAP20-2Q3LI61 65 aa1.93□□□□□ -2.1
CHD6-204ENST00000440647 SYNE1Q8NF91 8797 aaKnown RBP1.78□□□□□ -2.12
CHD6-204ENST00000440647 MT1AP04731 61 aa1.75□□□□□ -2.13
CHD6-204ENST00000440647 KRTAP6-1Q3LI64 71 aa1.74□□□□□ -2.13
CHD6-204ENST00000440647 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
CHD6-204ENST00000440647 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
CHD6-204ENST00000440647 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
CHD6-204ENST00000440647 MUC5BQ9HC84 5762 aaPredicted RBP1.62□□□□□ -2.15
CHD6-204ENST00000440647 PRM1P04553 51 aa1.27□□□□□ -2.21
CHD6-204ENST00000440647 PHGR1C9JFL3 82 aa1.21□□□□□ -2.22
CHD6-204ENST00000440647 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
CHD6-204ENST00000440647 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms