RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
PCGF3-207ENST00000440452 LCE2DQ5TA82 110 aaPredicted RBP4.21□□□□□ -1.74
PCGF3-207ENST00000440452 MT1LQ93083 61 aa4.2□□□□□ -1.74
PCGF3-207ENST00000440452 LOC100996750A0A140TA64 210 aa4.19□□□□□ -1.74
PCGF3-207ENST00000440452 MT1EP04732 61 aa4.18□□□□□ -1.74
PCGF3-207ENST00000440452 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
PCGF3-207ENST00000440452 MT1GP13640 62 aa4.15□□□□□ -1.75
PCGF3-207ENST00000440452 KRTAP2-3P0C7H8 128 aa4.13□□□□□ -1.75
PCGF3-207ENST00000440452 KRTAP2-4Q9BYR9 128 aa4.13□□□□□ -1.75
PCGF3-207ENST00000440452 KRTAP2-1Q9BYU5 128 aa4.13□□□□□ -1.75
PCGF3-207ENST00000440452 SPRR2FQ96RM1 72 aa4.03□□□□□ -1.76
PCGF3-207ENST00000440452 SYNE2Q8WXH0 6885 aaKnown RBP4.03□□□□□ -1.76
PCGF3-207ENST00000440452 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
PCGF3-207ENST00000440452 KRTAP19-6Q3LI70 58 aa3.99□□□□□ -1.77
PCGF3-207ENST00000440452 LCE3BQ5TA77 95 aa3.96□□□□□ -1.78
PCGF3-207ENST00000440452 KRTAP19-3Q7Z4W3 81 aa3.93□□□□□ -1.78
PCGF3-207ENST00000440452 MT1MQ8N339 61 aa3.93□□□□□ -1.78
PCGF3-207ENST00000440452 KRTAP4-9Q9BYQ8 210 aa3.9□□□□□ -1.79
PCGF3-207ENST00000440452 MDN1Q9NU22 5596 aa3.87□□□□□ -1.79
PCGF3-207ENST00000440452 KRTAP19-4Q3LI73 84 aa3.81□□□□□ -1.8
PCGF3-207ENST00000440452 PRM1P04553 51 aa3.74□□□□□ -1.81
PCGF3-207ENST00000440452 LCE5AQ5TCM9 118 aa3.7□□□□□ -1.82
PCGF3-207ENST00000440452 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
PCGF3-207ENST00000440452 KRTAP9-7A8MTY7 169 aa3.68□□□□□ -1.82
PCGF3-207ENST00000440452 KRTAP6-1Q3LI64 71 aa3.64□□□□□ -1.83
PCGF3-207ENST00000440452 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
PCGF3-207ENST00000440452 SPRR2EP22531 72 aa3.62□□□□□ -1.83
PCGF3-207ENST00000440452 SPRR2BP35325 72 aa3.62□□□□□ -1.83
PCGF3-207ENST00000440452 SPRR2AP35326 72 aa3.62□□□□□ -1.83
PCGF3-207ENST00000440452 KRTAP9-2Q9BYQ4 174 aa3.61□□□□□ -1.83
PCGF3-207ENST00000440452 LCE1AQ5T7P2 110 aa3.52□□□□□ -1.85
PCGF3-207ENST00000440452 MT1AP04731 61 aa3.47□□□□□ -1.85
PCGF3-207ENST00000440452 SPRR2DP22532 72 aa3.44□□□□□ -1.86
PCGF3-207ENST00000440452 KRTAP6-2Q3LI66 62 aa3.41□□□□□ -1.86
PCGF3-207ENST00000440452 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
PCGF3-207ENST00000440452 KRTAP9-6A0A140TA67 174 aa3.31□□□□□ -1.88
PCGF3-207ENST00000440452 KRTAP5-9P26371 169 aa3.29□□□□□ -1.88
PCGF3-207ENST00000440452 KRTAP6-3Q3LI67 103 aa3.27□□□□□ -1.89
PCGF3-207ENST00000440452 KRTAP9-4Q9BYQ2 154 aa3.27□□□□□ -1.89
PCGF3-207ENST00000440452 MT4P47944 62 aa3.2□□□□□ -1.9
PCGF3-207ENST00000440452 MT3P25713 68 aa3.2□□□□□ -1.9
PCGF3-207ENST00000440452 KRTAP2-2Q9BYT5 123 aa3.19□□□□□ -1.9
PCGF3-207ENST00000440452 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.17□□□□□ -1.9
PCGF3-207ENST00000440452 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
PCGF3-207ENST00000440452 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.91
PCGF3-207ENST00000440452 KRTAP4-6Q9BYQ5 205 aa3.07□□□□□ -1.92
PCGF3-207ENST00000440452 NEBP20929 6669 aa2.98□□□□□ -1.93
PCGF3-207ENST00000440452 LCE1DQ5T752 114 aa2.95□□□□□ -1.94
PCGF3-207ENST00000440452 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
PCGF3-207ENST00000440452 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
PCGF3-207ENST00000440452 LCE1BQ5T7P3 118 aa2.88□□□□□ -1.95
PCGF3-207ENST00000440452 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
PCGF3-207ENST00000440452 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
PCGF3-207ENST00000440452 LCE4AQ5TA78 99 aa2.82□□□□□ -1.96
PCGF3-207ENST00000440452 KRTAP5-4Q6L8H1 288 aa2.8□□□□□ -1.96
PCGF3-207ENST00000440452 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
PCGF3-207ENST00000440452 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
PCGF3-207ENST00000440452 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
PCGF3-207ENST00000440452 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
PCGF3-207ENST00000440452 KRTAP5-3Q6L8H2 238 aa2.55□□□□□ -2
PCGF3-207ENST00000440452 KRTAP5-10Q6L8G5 202 aa2.44□□□□□ -2.02
PCGF3-207ENST00000440452 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
PCGF3-207ENST00000440452 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
PCGF3-207ENST00000440452 KRTAP4-2Q9BYR5 136 aa2.37□□□□□ -2.03
PCGF3-207ENST00000440452 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
PCGF3-207ENST00000440452 AHNAK2Q8IVF2 5795 aa2.33□□□□□ -2.04
PCGF3-207ENST00000440452 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
PCGF3-207ENST00000440452 LCE1CQ5T751 118 aa2.3□□□□□ -2.04
PCGF3-207ENST00000440452 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
PCGF3-207ENST00000440452 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
PCGF3-207ENST00000440452 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
PCGF3-207ENST00000440452 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
PCGF3-207ENST00000440452 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
PCGF3-207ENST00000440452 AHNAKQ09666 5890 aaKnown RBP2.04□□□□□ -2.08
PCGF3-207ENST00000440452 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
PCGF3-207ENST00000440452 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
PCGF3-207ENST00000440452 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
PCGF3-207ENST00000440452 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 1121.5 ms