RNA–Protein interactions for RNA: ENST00000440028.2

MSL3P1-202, Transcript of MSL complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene MSL3P1, Length 1,468 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3P1-202ENST00000440028 MUC17Q685J3 4493 aa2.58□□□□□ -2
MSL3P1-202ENST00000440028 KRTAP4-3Q9BYR4 195 aa2.54□□□□□ -2
MSL3P1-202ENST00000440028 SSPOA2VEC9 5147 aa2.5□□□□□ -2.01
MSL3P1-202ENST00000440028 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
MSL3P1-202ENST00000440028 KRTAP19-2Q3LHN2 52 aa2.49□□□□□ -2.01
MSL3P1-202ENST00000440028 SYNE2Q8WXH0 6885 aaKnown RBP2.49□□□□□ -2.01
MSL3P1-202ENST00000440028 KRTAP8-1Q8IUC2 63 aa2.48□□□□□ -2.01
MSL3P1-202ENST00000440028 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
MSL3P1-202ENST00000440028 MT1HP80294 61 aa2.46□□□□□ -2.02
MSL3P1-202ENST00000440028 FLGP20930 4061 aaPredicted RBP2.46□□□□□ -2.02
MSL3P1-202ENST00000440028 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
MSL3P1-202ENST00000440028 KRTAP9-6A8MVA2 160 aa2.44□□□□□ -2.02
MSL3P1-202ENST00000440028 SPRR2GQ9BYE4 73 aa2.44□□□□□ -2.02
MSL3P1-202ENST00000440028 M0R2T5 61 aa2.43□□□□□ -2.02
MSL3P1-202ENST00000440028 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
MSL3P1-202ENST00000440028 USH2AO75445 5202 aa2.41□□□□□ -2.02
MSL3P1-202ENST00000440028 NEBP20929 6669 aa2.4□□□□□ -2.03
MSL3P1-202ENST00000440028 FCGBPQ9Y6R7 5405 aaPredicted RBP2.4□□□□□ -2.03
MSL3P1-202ENST00000440028 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
MSL3P1-202ENST00000440028 KRTAP10-5P60370 271 aa2.38□□□□□ -2.03
MSL3P1-202ENST00000440028 KRTAP12-3P60328 96 aa2.36□□□□□ -2.03
MSL3P1-202ENST00000440028 KRTAP10-10P60014 251 aa2.34□□□□□ -2.03
MSL3P1-202ENST00000440028 KRTAP6-3Q3LI67 103 aa2.34□□□□□ -2.03
MSL3P1-202ENST00000440028 KRTAP10-12P60413 245 aa2.33□□□□□ -2.04
MSL3P1-202ENST00000440028 MT2AP02795 61 aa2.3□□□□□ -2.04
MSL3P1-202ENST00000440028 KRTAP19-8Q3LI54 63 aa2.29□□□□□ -2.04
MSL3P1-202ENST00000440028 MT1FP04733 61 aa2.28□□□□□ -2.04
MSL3P1-202ENST00000440028 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
MSL3P1-202ENST00000440028 LCE3CQ5T5A8 94 aa2.26□□□□□ -2.05
MSL3P1-202ENST00000440028 MUC12Q9UKN1 5478 aa2.24□□□□□ -2.05
MSL3P1-202ENST00000440028 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
MSL3P1-202ENST00000440028 KRTAP2-3P0C7H8 128 aa2.22□□□□□ -2.05
MSL3P1-202ENST00000440028 KRTAP2-4Q9BYR9 128 aa2.22□□□□□ -2.05
MSL3P1-202ENST00000440028 KRTAP2-1Q9BYU5 128 aa2.22□□□□□ -2.05
MSL3P1-202ENST00000440028 KRTAP12-4P60329 112 aa2.2□□□□□ -2.06
MSL3P1-202ENST00000440028 MT1XP80297 61 aa2.2□□□□□ -2.06
MSL3P1-202ENST00000440028 KMT2DO14686 5537 aa2.15□□□□□ -2.06
MSL3P1-202ENST00000440028 MT1BP07438 61 aa2.15□□□□□ -2.06
MSL3P1-202ENST00000440028 KRTAP19-6Q3LI70 58 aa2.15□□□□□ -2.06
MSL3P1-202ENST00000440028 MDN1Q9NU22 5596 aa2.11□□□□□ -2.07
MSL3P1-202ENST00000440028 KRTAP19-5Q3LI72 72 aa2.11□□□□□ -2.07
MSL3P1-202ENST00000440028 LCE3EQ5T5B0 92 aa2.05□□□□□ -2.08
MSL3P1-202ENST00000440028 SPRR2EP22531 72 aa1.99□□□□□ -2.09
MSL3P1-202ENST00000440028 SPRR2BP35325 72 aa1.99□□□□□ -2.09
MSL3P1-202ENST00000440028 SPRR2AP35326 72 aa1.99□□□□□ -2.09
MSL3P1-202ENST00000440028 MT1EP04732 61 aa1.98□□□□□ -2.09
MSL3P1-202ENST00000440028 KRTAP19-7Q3SYF9 63 aa1.95□□□□□ -2.1
MSL3P1-202ENST00000440028 MT1LQ93083 61 aa1.95□□□□□ -2.1
MSL3P1-202ENST00000440028 SPRR2DP22532 72 aa1.94□□□□□ -2.1
MSL3P1-202ENST00000440028 SPRR2FQ96RM1 72 aa1.91□□□□□ -2.1
MSL3P1-202ENST00000440028 LCE3DQ9BYE3 92 aa1.91□□□□□ -2.1
MSL3P1-202ENST00000440028 KRTAP5-5Q701N2 237 aaPredicted RBP1.9□□□□□ -2.11
MSL3P1-202ENST00000440028 AHNAK2Q8IVF2 5795 aa1.9□□□□□ -2.11
MSL3P1-202ENST00000440028 MT1AP04731 61 aa1.89□□□□□ -2.11
MSL3P1-202ENST00000440028 DSTQ03001 7570 aaKnown RBP1.88□□□□□ -2.11
MSL3P1-202ENST00000440028 KRTAP5-10Q6L8G5 202 aa1.86□□□□□ -2.11
MSL3P1-202ENST00000440028 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
MSL3P1-202ENST00000440028 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
MSL3P1-202ENST00000440028 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
MSL3P1-202ENST00000440028 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
MSL3P1-202ENST00000440028 MT1GP13640 62 aa1.82□□□□□ -2.12
MSL3P1-202ENST00000440028 KRTAP19-3Q7Z4W3 81 aa1.76□□□□□ -2.13
MSL3P1-202ENST00000440028 MT1MQ8N339 61 aa1.76□□□□□ -2.13
MSL3P1-202ENST00000440028 PRM1P04553 51 aa1.75□□□□□ -2.13
MSL3P1-202ENST00000440028 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
MSL3P1-202ENST00000440028 MT4P47944 62 aa1.71□□□□□ -2.14
MSL3P1-202ENST00000440028 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.14
MSL3P1-202ENST00000440028 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
MSL3P1-202ENST00000440028 KRTAP6-2Q3LI66 62 aa1.63□□□□□ -2.15
MSL3P1-202ENST00000440028 KRTAP6-1Q3LI64 71 aa1.6□□□□□ -2.15
MSL3P1-202ENST00000440028 MUC19Q7Z5P9 8384 aa1.54□□□□□ -2.16
MSL3P1-202ENST00000440028 SYNE1Q8NF91 8797 aaKnown RBP1.49□□□□□ -2.17
MSL3P1-202ENST00000440028 KRTAP20-2Q3LI61 65 aa1.49□□□□□ -2.17
MSL3P1-202ENST00000440028 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
MSL3P1-202ENST00000440028 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
MSL3P1-202ENST00000440028 PHGR1C9JFL3 82 aa1.13□□□□□ -2.23
MSL3P1-202ENST00000440028 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
Retrieved 77 of 20,778 RNA–protein pairs in 163.9 ms