RNA–Protein interactions for RNA: ENST00000439984.7

PCNX1-202, Transcript of pecanex 1, humanhuman

TSL 1 (best) BASIC

Gene PCNX1, Length 6,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-202ENST00000439984 SPRR2EP22531 72 aa4.52□□□□□ -1.69
PCNX1-202ENST00000439984 SPRR2BP35325 72 aa4.52□□□□□ -1.69
PCNX1-202ENST00000439984 SPRR2AP35326 72 aa4.52□□□□□ -1.69
PCNX1-202ENST00000439984 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
PCNX1-202ENST00000439984 KRTAP2-3P0C7H8 128 aa4.48□□□□□ -1.69
PCNX1-202ENST00000439984 KRTAP2-4Q9BYR9 128 aa4.48□□□□□ -1.69
PCNX1-202ENST00000439984 KRTAP2-1Q9BYU5 128 aa4.48□□□□□ -1.69
PCNX1-202ENST00000439984 KRTAP19-3Q7Z4W3 81 aa4.47□□□□□ -1.69
PCNX1-202ENST00000439984 KRTAP4-9Q9BYQ8 210 aa4.46□□□□□ -1.69
PCNX1-202ENST00000439984 KRTAP19-7Q3SYF9 63 aa4.44□□□□□ -1.7
PCNX1-202ENST00000439984 SYNE1Q8NF91 8797 aaKnown RBP4.42□□□□□ -1.7
PCNX1-202ENST00000439984 KRTAP19-6Q3LI70 58 aa4.41□□□□□ -1.7
PCNX1-202ENST00000439984 MT1MQ8N339 61 aa4.37□□□□□ -1.71
PCNX1-202ENST00000439984 KRTAP9-6A8MVA2 160 aa4.36□□□□□ -1.71
PCNX1-202ENST00000439984 SPRR2DP22532 72 aa4.33□□□□□ -1.72
PCNX1-202ENST00000439984 USH2AO75445 5202 aa4.27□□□□□ -1.73
PCNX1-202ENST00000439984 KMT2DO14686 5537 aa4.27□□□□□ -1.73
PCNX1-202ENST00000439984 MT3P25713 68 aa4.18□□□□□ -1.74
PCNX1-202ENST00000439984 KRTAP9-7A8MTY7 169 aa4.16□□□□□ -1.74
PCNX1-202ENST00000439984 LCE2DQ5TA82 110 aaPredicted RBP4.13□□□□□ -1.75
PCNX1-202ENST00000439984 KRTAP9-2Q9BYQ4 174 aa4.12□□□□□ -1.75
PCNX1-202ENST00000439984 KRTAP6-2Q3LI66 62 aa4.11□□□□□ -1.75
PCNX1-202ENST00000439984 SYNE2Q8WXH0 6885 aaKnown RBP4.05□□□□□ -1.76
PCNX1-202ENST00000439984 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
PCNX1-202ENST00000439984 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
PCNX1-202ENST00000439984 MT1AP04731 61 aa4.04□□□□□ -1.76
PCNX1-202ENST00000439984 DSTQ03001 7570 aaKnown RBP4.03□□□□□ -1.76
PCNX1-202ENST00000439984 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
PCNX1-202ENST00000439984 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
PCNX1-202ENST00000439984 KRTAP6-1Q3LI64 71 aa3.98□□□□□ -1.77
PCNX1-202ENST00000439984 MT4P47944 62 aa3.98□□□□□ -1.77
PCNX1-202ENST00000439984 LCE5AQ5TCM9 118 aa3.94□□□□□ -1.78
PCNX1-202ENST00000439984 MUC12Q9UKN1 5478 aa3.87□□□□□ -1.79
PCNX1-202ENST00000439984 SSPOA2VEC9 5147 aa3.85□□□□□ -1.79
PCNX1-202ENST00000439984 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
PCNX1-202ENST00000439984 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
PCNX1-202ENST00000439984 MACF1Q9UPN3 7388 aaKnown RBP3.77□□□□□ -1.81
PCNX1-202ENST00000439984 KRTAP9-4Q9BYQ2 154 aa3.73□□□□□ -1.81
PCNX1-202ENST00000439984 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
PCNX1-202ENST00000439984 KRTAP6-3Q3LI67 103 aa3.64□□□□□ -1.83
PCNX1-202ENST00000439984 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.62□□□□□ -1.83
PCNX1-202ENST00000439984 KRTAP4-11Q9BYQ6 195 aa3.52□□□□□ -1.85
PCNX1-202ENST00000439984 KRTAP5-9P26371 169 aa3.49□□□□□ -1.85
PCNX1-202ENST00000439984 LCE1EQ5T753 118 aa3.47□□□□□ -1.85
PCNX1-202ENST00000439984 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
PCNX1-202ENST00000439984 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
PCNX1-202ENST00000439984 KRTAP20-1Q3LI63 56 aa3.35□□□□□ -1.87
PCNX1-202ENST00000439984 MDN1Q9NU22 5596 aa3.32□□□□□ -1.88
PCNX1-202ENST00000439984 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
PCNX1-202ENST00000439984 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
PCNX1-202ENST00000439984 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
PCNX1-202ENST00000439984 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
PCNX1-202ENST00000439984 NEBP20929 6669 aa3.13□□□□□ -1.91
PCNX1-202ENST00000439984 KRTAP20-2Q3LI61 65 aa3.12□□□□□ -1.91
PCNX1-202ENST00000439984 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
PCNX1-202ENST00000439984 KRTAP5-4Q6L8H1 288 aa2.87□□□□□ -1.95
PCNX1-202ENST00000439984 KRTAP4-12Q9BQ66 201 aa2.77□□□□□ -1.97
PCNX1-202ENST00000439984 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
PCNX1-202ENST00000439984 MUC5ACP98088 5654 aa2.73□□□□□ -1.97
PCNX1-202ENST00000439984 KRTAP9-9Q9BYP9 154 aa2.69□□□□□ -1.98
PCNX1-202ENST00000439984 HMCN1Q96RW7 5635 aa2.63□□□□□ -1.99
PCNX1-202ENST00000439984 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
PCNX1-202ENST00000439984 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
PCNX1-202ENST00000439984 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
PCNX1-202ENST00000439984 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
PCNX1-202ENST00000439984 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
PCNX1-202ENST00000439984 AHNAK2Q8IVF2 5795 aa2.32□□□□□ -2.04
PCNX1-202ENST00000439984 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
PCNX1-202ENST00000439984 KRTAP21-2Q3LI59 83 aa2.2□□□□□ -2.06
PCNX1-202ENST00000439984 KRTAP21-1Q3LI58 79 aa2.13□□□□□ -2.07
PCNX1-202ENST00000439984 KRTAP5-11Q6L8G4 156 aa2.11□□□□□ -2.07
PCNX1-202ENST00000439984 MUC5BQ9HC84 5762 aaPredicted RBP2.11□□□□□ -2.07
PCNX1-202ENST00000439984 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
PCNX1-202ENST00000439984 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
PCNX1-202ENST00000439984 KRTAP5-7Q6L8G8 165 aa1.86□□□□□ -2.11
PCNX1-202ENST00000439984 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
PCNX1-202ENST00000439984 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms