RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 LOC100996750A0A140TA64 210 aa4.56□□□□□ -1.68
HERPUD1-204ENST00000439977 KRTAP2-3P0C7H8 128 aa4.56□□□□□ -1.68
HERPUD1-204ENST00000439977 KRTAP2-4Q9BYR9 128 aa4.56□□□□□ -1.68
HERPUD1-204ENST00000439977 KRTAP2-1Q9BYU5 128 aa4.56□□□□□ -1.68
HERPUD1-204ENST00000439977 KRTAP19-6Q3LI70 58 aa4.52□□□□□ -1.69
HERPUD1-204ENST00000439977 CRCT1Q9UGL9 99 aa4.49□□□□□ -1.69
HERPUD1-204ENST00000439977 MT1GP13640 62 aa4.47□□□□□ -1.69
HERPUD1-204ENST00000439977 KRTAP19-4Q3LI73 84 aa4.4□□□□□ -1.7
HERPUD1-204ENST00000439977 MT1MQ8N339 61 aa4.37□□□□□ -1.71
HERPUD1-204ENST00000439977 KRTAP19-3Q7Z4W3 81 aa4.35□□□□□ -1.71
HERPUD1-204ENST00000439977 MACF1Q9UPN3 7388 aaKnown RBP4.34□□□□□ -1.72
HERPUD1-204ENST00000439977 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
HERPUD1-204ENST00000439977 SPRR2FQ96RM1 72 aa4.29□□□□□ -1.72
HERPUD1-204ENST00000439977 SYNE2Q8WXH0 6885 aaKnown RBP4.26□□□□□ -1.73
HERPUD1-204ENST00000439977 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
HERPUD1-204ENST00000439977 LCE5AQ5TCM9 118 aa4.19□□□□□ -1.74
HERPUD1-204ENST00000439977 LCE3BQ5TA77 95 aa4.15□□□□□ -1.74
HERPUD1-204ENST00000439977 KRTAP12-4P60329 112 aa4.15□□□□□ -1.75
HERPUD1-204ENST00000439977 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
HERPUD1-204ENST00000439977 OBSCNQ5VST9 7968 aa4.08□□□□□ -1.76
HERPUD1-204ENST00000439977 KRTAP6-1Q3LI64 71 aa4.02□□□□□ -1.77
HERPUD1-204ENST00000439977 KRTAP9-2Q9BYQ4 174 aa3.95□□□□□ -1.78
HERPUD1-204ENST00000439977 LCE1AQ5T7P2 110 aa3.93□□□□□ -1.78
HERPUD1-204ENST00000439977 MT1AP04731 61 aa3.88□□□□□ -1.79
HERPUD1-204ENST00000439977 SPRR2EP22531 72 aa3.86□□□□□ -1.79
HERPUD1-204ENST00000439977 SPRR2BP35325 72 aa3.86□□□□□ -1.79
HERPUD1-204ENST00000439977 SPRR2AP35326 72 aa3.86□□□□□ -1.79
HERPUD1-204ENST00000439977 LCE3DQ9BYE3 92 aa3.84□□□□□ -1.79
HERPUD1-204ENST00000439977 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
HERPUD1-204ENST00000439977 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
HERPUD1-204ENST00000439977 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
HERPUD1-204ENST00000439977 KRTAP9-7A8MTY7 169 aa3.76□□□□□ -1.81
HERPUD1-204ENST00000439977 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
HERPUD1-204ENST00000439977 KRTAP4-6Q9BYQ5 205 aa3.74□□□□□ -1.81
HERPUD1-204ENST00000439977 SPRR2DP22532 72 aa3.68□□□□□ -1.82
HERPUD1-204ENST00000439977 PRM1P04553 51 aa3.67□□□□□ -1.82
HERPUD1-204ENST00000439977 KRTAP9-4Q9BYQ2 154 aa3.66□□□□□ -1.82
HERPUD1-204ENST00000439977 KRTAP6-2Q3LI66 62 aa3.62□□□□□ -1.83
HERPUD1-204ENST00000439977 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.5□□□□□ -1.85
HERPUD1-204ENST00000439977 MT3P25713 68 aa3.5□□□□□ -1.85
HERPUD1-204ENST00000439977 KRTAP6-3Q3LI67 103 aa3.46□□□□□ -1.86
HERPUD1-204ENST00000439977 MT4P47944 62 aa3.35□□□□□ -1.87
HERPUD1-204ENST00000439977 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
HERPUD1-204ENST00000439977 NEBP20929 6669 aa3.31□□□□□ -1.88
HERPUD1-204ENST00000439977 KRTAP5-4Q6L8H1 288 aa3.29□□□□□ -1.88
HERPUD1-204ENST00000439977 KRTAP9-9Q9BYP9 154 aa3.26□□□□□ -1.89
HERPUD1-204ENST00000439977 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
HERPUD1-204ENST00000439977 KRTAP2-2Q9BYT5 123 aa3.18□□□□□ -1.9
HERPUD1-204ENST00000439977 KRTAP20-2Q3LI61 65 aa3.17□□□□□ -1.9
HERPUD1-204ENST00000439977 LCE4AQ5TA78 99 aa3.14□□□□□ -1.91
HERPUD1-204ENST00000439977 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
HERPUD1-204ENST00000439977 LCE1DQ5T752 114 aa3.07□□□□□ -1.92
HERPUD1-204ENST00000439977 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
HERPUD1-204ENST00000439977 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
HERPUD1-204ENST00000439977 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
HERPUD1-204ENST00000439977 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
HERPUD1-204ENST00000439977 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
HERPUD1-204ENST00000439977 KRTAP4-11Q9BYQ6 195 aa2.89□□□□□ -1.95
HERPUD1-204ENST00000439977 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
HERPUD1-204ENST00000439977 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.96
HERPUD1-204ENST00000439977 KRTAP5-1Q6L8H4 278 aa2.69□□□□□ -1.98
HERPUD1-204ENST00000439977 LCE1CQ5T751 118 aa2.65□□□□□ -1.99
HERPUD1-204ENST00000439977 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
HERPUD1-204ENST00000439977 KRTAP21-2Q3LI59 83 aa2.55□□□□□ -2
HERPUD1-204ENST00000439977 AHNAK2Q8IVF2 5795 aa2.51□□□□□ -2.01
HERPUD1-204ENST00000439977 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
HERPUD1-204ENST00000439977 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
HERPUD1-204ENST00000439977 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
HERPUD1-204ENST00000439977 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
HERPUD1-204ENST00000439977 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
HERPUD1-204ENST00000439977 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
HERPUD1-204ENST00000439977 LCE1FQ5T754 118 aa2.31□□□□□ -2.04
HERPUD1-204ENST00000439977 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
HERPUD1-204ENST00000439977 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
HERPUD1-204ENST00000439977 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
HERPUD1-204ENST00000439977 AHNAKQ09666 5890 aaKnown RBP1.88□□□□□ -2.11
HERPUD1-204ENST00000439977 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 5.6 ms