RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 IGKV3D-7A0A0C4DH55 119 aa0.86□□□□□ -2.27
HMGB1P18-201ENST00000438801 A0A0G2JQZ4 141 aa0.86□□□□□ -2.27
HMGB1P18-201ENST00000438801 NDUFC1O43677 76 aa0.86□□□□□ -2.27
HMGB1P18-201ENST00000438801 KLKP1Q107X0 134 aa0.86□□□□□ -2.27
HMGB1P18-201ENST00000438801 NREPQ16612 68 aa0.86□□□□□ -2.27
HMGB1P18-201ENST00000438801 SPACA4Q8TDM5 124 aa0.86□□□□□ -2.27
HMGB1P18-201ENST00000438801 SSBP3-AS1Q7Z2R9 100 aa0.85□□□□□ -2.27
HMGB1P18-201ENST00000438801 CYP4F30PQ9H0H9 118 aa0.85□□□□□ -2.27
HMGB1P18-201ENST00000438801 LINC00472Q9H8W2 130 aa0.85□□□□□ -2.27
HMGB1P18-201ENST00000438801 A0A087WVE0 104 aa0.84□□□□□ -2.27
HMGB1P18-201ENST00000438801 F8WEM9 126 aa0.84□□□□□ -2.27
HMGB1P18-201ENST00000438801 H7BZZ5 65 aa0.84□□□□□ -2.27
HMGB1P18-201ENST00000438801 DEFB105AQ8NG35 78 aa0.84□□□□□ -2.27
HMGB1P18-201ENST00000438801 DMAC1Q96GE9 116 aa0.84□□□□□ -2.27
HMGB1P18-201ENST00000438801 HCG22E2RYF7 251 aa0.83□□□□□ -2.28
HMGB1P18-201ENST00000438801 INE1O15225 51 aa0.83□□□□□ -2.28
HMGB1P18-201ENST00000438801 PRLHP81277 87 aa0.83□□□□□ -2.28
HMGB1P18-201ENST00000438801 Q96NJ1 140 aa0.83□□□□□ -2.28
HMGB1P18-201ENST00000438801 TP53AIP1Q9HCN2 124 aa0.83□□□□□ -2.28
HMGB1P18-201ENST00000438801 CDC42SE1Q9NRR8 79 aa0.83□□□□□ -2.28
HMGB1P18-201ENST00000438801 K7EQZ3 153 aa0.82□□□□□ -2.28
HMGB1P18-201ENST00000438801 NDUFB1O75438 58 aa0.82□□□□□ -2.28
HMGB1P18-201ENST00000438801 KRTAP12-1P59990 96 aa0.82□□□□□ -2.28
HMGB1P18-201ENST00000438801 RPS29P62273 56 aaKnown RBP0.82□□□□□ -2.28
HMGB1P18-201ENST00000438801 CSAG1Q6PB30 78 aa0.82□□□□□ -2.28
HMGB1P18-201ENST00000438801 C20orf197Q8N268 126 aa0.82□□□□□ -2.28
HMGB1P18-201ENST00000438801 CYSTM1Q9H1C7 97 aa0.82□□□□□ -2.28
HMGB1P18-201ENST00000438801 MMP24-AS1A0A0U1RRL7 71 aa0.81□□□□□ -2.28
HMGB1P18-201ENST00000438801 SPINK1P00995 79 aa0.81□□□□□ -2.28
HMGB1P18-201ENST00000438801 SPAG11AQ6PDA7 123 aa0.81□□□□□ -2.28
HMGB1P18-201ENST00000438801 TRAV22A0A0B4J277 110 aa0.8□□□□□ -2.28
HMGB1P18-201ENST00000438801 LOC101927531A0A1B0GV80 90 aa0.8□□□□□ -2.28
HMGB1P18-201ENST00000438801 COA5Q86WW8 74 aa0.8□□□□□ -2.28
HMGB1P18-201ENST00000438801 MRPL34Q9BQ48 92 aaKnown RBP0.8□□□□□ -2.28
HMGB1P18-201ENST00000438801 SNURFQ9Y675 71 aa0.8□□□□□ -2.28
HMGB1P18-201ENST00000438801 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
HMGB1P18-201ENST00000438801 H0Y9P7 68 aa0.79□□□□□ -2.28
HMGB1P18-201ENST00000438801 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
HMGB1P18-201ENST00000438801 Q5VV11 94 aa0.79□□□□□ -2.28
HMGB1P18-201ENST00000438801 WFDC13Q8IUB5 93 aa0.79□□□□□ -2.28
HMGB1P18-201ENST00000438801 SPTSSBQ8NFR3 76 aa0.79□□□□□ -2.28
HMGB1P18-201ENST00000438801 LINC00208Q96KT6 92 aa0.79□□□□□ -2.28
HMGB1P18-201ENST00000438801 LIMD2Q9BT23 127 aa0.79□□□□□ -2.28
HMGB1P18-201ENST00000438801 MT1BP07438 61 aa0.78□□□□□ -2.28
HMGB1P18-201ENST00000438801 ACYP2P14621 99 aa0.77□□□□□ -2.29
HMGB1P18-201ENST00000438801 LINC01558Q9Y6Z2 57 aa0.77□□□□□ -2.29
HMGB1P18-201ENST00000438801 CHKB-CPT1BH3BT56 60 aa0.75□□□□□ -2.29
HMGB1P18-201ENST00000438801 SPINK7P58062 85 aa0.74□□□□□ -2.29
HMGB1P18-201ENST00000438801 RPL37P61927 97 aaKnown RBP0.74□□□□□ -2.29
HMGB1P18-201ENST00000438801 SPATA8Q6RVD6 105 aa0.74□□□□□ -2.29
HMGB1P18-201ENST00000438801 PRR15LQ9BU68 103 aa0.73□□□□□ -2.29
HMGB1P18-201ENST00000438801 A0A1B0GU69 56 aa0.72□□□□□ -2.29
HMGB1P18-201ENST00000438801 UQCR11O14957 56 aa0.72□□□□□ -2.29
HMGB1P18-201ENST00000438801 C9orf92A6NGG3 77 aa0.71□□□□□ -2.3
HMGB1P18-201ENST00000438801 H1FX-AS1Q4G0G2 97 aa0.71□□□□□ -2.3
HMGB1P18-201ENST00000438801 H0YAA0 97 aa0.7□□□□□ -2.3
HMGB1P18-201ENST00000438801 KRTAP19-3Q7Z4W3 81 aa0.7□□□□□ -2.3
HMGB1P18-201ENST00000438801 PLAC4Q8WY50 150 aa0.7□□□□□ -2.3
HMGB1P18-201ENST00000438801 M0QZ58 72 aa0.69□□□□□ -2.3
HMGB1P18-201ENST00000438801 S4R3F8 94 aa0.68□□□□□ -2.3
HMGB1P18-201ENST00000438801 CRIPTQ9P021 101 aa0.67□□□□□ -2.3
HMGB1P18-201ENST00000438801 KRTAP19-8Q3LI54 63 aa0.64□□□□□ -2.31
HMGB1P18-201ENST00000438801 SPRR2GQ9BYE4 73 aa0.63□□□□□ -2.31
HMGB1P18-201ENST00000438801 A0A0D9SG42 100 aa0.62□□□□□ -2.31
HMGB1P18-201ENST00000438801 C10orf95Q9H7T3 257 aa0.61□□□□□ -2.31
HMGB1P18-201ENST00000438801 TNP1P09430 55 aa0.59□□□□□ -2.31
HMGB1P18-201ENST00000438801 MT1GP13640 62 aa0.59□□□□□ -2.31
HMGB1P18-201ENST00000438801 MT1MQ8N339 61 aa0.58□□□□□ -2.32
HMGB1P18-201ENST00000438801 MT1XP80297 61 aa0.57□□□□□ -2.32
HMGB1P18-201ENST00000438801 MT1EP04732 61 aa0.54□□□□□ -2.32
HMGB1P18-201ENST00000438801 KRTAP6-2Q3LI66 62 aa0.52□□□□□ -2.33
HMGB1P18-201ENST00000438801 KRTAP19-5Q3LI72 72 aa0.51□□□□□ -2.33
HMGB1P18-201ENST00000438801 KRTAP19-7Q3SYF9 63 aa0.51□□□□□ -2.33
HMGB1P18-201ENST00000438801 MT1LQ93083 61 aa0.49□□□□□ -2.33
HMGB1P18-201ENST00000438801 MT1AP04731 61 aa0.43□□□□□ -2.34
HMGB1P18-201ENST00000438801 KRTAP6-1Q3LI64 71 aa0.41□□□□□ -2.34
HMGB1P18-201ENST00000438801 PRM1P04553 51 aa0.32□□□□□ -2.36
Retrieved 77 of 20,778 RNA–protein pairs in 71.1 ms