RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 SPRR2DP22532 72 aa4.09□□□□□ -1.75
TRAPPC9-202ENST00000438773 KRTAP19-4Q3LI73 84 aa4.08□□□□□ -1.76
TRAPPC9-202ENST00000438773 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
TRAPPC9-202ENST00000438773 KRTAP9-7A8MTY7 169 aa4□□□□□ -1.77
TRAPPC9-202ENST00000438773 KRTAP9-6A8MVA2 160 aa3.99□□□□□ -1.77
TRAPPC9-202ENST00000438773 MT1EP04732 61 aa3.96□□□□□ -1.78
TRAPPC9-202ENST00000438773 MT1GP13640 62 aa3.96□□□□□ -1.78
TRAPPC9-202ENST00000438773 MT1LQ93083 61 aa3.94□□□□□ -1.78
TRAPPC9-202ENST00000438773 FCGBPQ9Y6R7 5405 aaPredicted RBP3.92□□□□□ -1.78
TRAPPC9-202ENST00000438773 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.79
TRAPPC9-202ENST00000438773 KRTAP19-3Q7Z4W3 81 aa3.9□□□□□ -1.79
TRAPPC9-202ENST00000438773 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
TRAPPC9-202ENST00000438773 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC9-202ENST00000438773 KRTAP12-4P60329 112 aa3.86□□□□□ -1.79
TRAPPC9-202ENST00000438773 LCE3BQ5TA77 95 aa3.85□□□□□ -1.79
TRAPPC9-202ENST00000438773 SYNE2Q8WXH0 6885 aaKnown RBP3.83□□□□□ -1.8
TRAPPC9-202ENST00000438773 KRTAP6-3Q3LI67 103 aa3.81□□□□□ -1.8
TRAPPC9-202ENST00000438773 KRTAP2-3P0C7H8 128 aa3.78□□□□□ -1.8
TRAPPC9-202ENST00000438773 KRTAP2-4Q9BYR9 128 aa3.78□□□□□ -1.8
TRAPPC9-202ENST00000438773 KRTAP2-1Q9BYU5 128 aa3.78□□□□□ -1.8
TRAPPC9-202ENST00000438773 MT1MQ8N339 61 aa3.78□□□□□ -1.8
TRAPPC9-202ENST00000438773 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
TRAPPC9-202ENST00000438773 KRTAP4-3Q9BYR4 195 aa3.75□□□□□ -1.81
TRAPPC9-202ENST00000438773 LOC100996750A0A140TA64 210 aa3.73□□□□□ -1.81
TRAPPC9-202ENST00000438773 SSPOA2VEC9 5147 aa3.72□□□□□ -1.81
TRAPPC9-202ENST00000438773 MUC12Q9UKN1 5478 aa3.64□□□□□ -1.83
TRAPPC9-202ENST00000438773 MACF1Q9UPN3 7388 aaKnown RBP3.64□□□□□ -1.83
TRAPPC9-202ENST00000438773 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
TRAPPC9-202ENST00000438773 MT4P47944 62 aa3.61□□□□□ -1.83
TRAPPC9-202ENST00000438773 KRTAP4-9Q9BYQ8 210 aa3.57□□□□□ -1.84
TRAPPC9-202ENST00000438773 KRTAP2-2Q9BYT5 123 aa3.53□□□□□ -1.84
TRAPPC9-202ENST00000438773 LCE5AQ5TCM9 118 aa3.53□□□□□ -1.84
TRAPPC9-202ENST00000438773 LCE3DQ9BYE3 92 aa3.52□□□□□ -1.85
TRAPPC9-202ENST00000438773 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
TRAPPC9-202ENST00000438773 MT1AP04731 61 aa3.41□□□□□ -1.86
TRAPPC9-202ENST00000438773 PRM1P04553 51 aa3.41□□□□□ -1.86
TRAPPC9-202ENST00000438773 NEBP20929 6669 aa3.36□□□□□ -1.87
TRAPPC9-202ENST00000438773 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
TRAPPC9-202ENST00000438773 MT3P25713 68 aa3.35□□□□□ -1.87
TRAPPC9-202ENST00000438773 LCE4AQ5TA78 99 aa3.33□□□□□ -1.88
TRAPPC9-202ENST00000438773 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
TRAPPC9-202ENST00000438773 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
TRAPPC9-202ENST00000438773 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
TRAPPC9-202ENST00000438773 LCE1BQ5T7P3 118 aa3.19□□□□□ -1.9
TRAPPC9-202ENST00000438773 LCE1DQ5T752 114 aa3.18□□□□□ -1.9
TRAPPC9-202ENST00000438773 KRTAP9-4Q9BYQ2 154 aa3.17□□□□□ -1.9
TRAPPC9-202ENST00000438773 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
TRAPPC9-202ENST00000438773 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
TRAPPC9-202ENST00000438773 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
TRAPPC9-202ENST00000438773 KRTAP4-6Q9BYQ5 205 aa2.93□□□□□ -1.94
TRAPPC9-202ENST00000438773 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
TRAPPC9-202ENST00000438773 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.96
TRAPPC9-202ENST00000438773 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
TRAPPC9-202ENST00000438773 KRTAP4-11Q9BYQ6 195 aa2.65□□□□□ -1.98
TRAPPC9-202ENST00000438773 LCE1CQ5T751 118 aa2.63□□□□□ -1.99
TRAPPC9-202ENST00000438773 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
TRAPPC9-202ENST00000438773 LCE1FQ5T754 118 aa2.63□□□□□ -1.99
TRAPPC9-202ENST00000438773 KRTAP5-3Q6L8H2 238 aa2.63□□□□□ -1.99
TRAPPC9-202ENST00000438773 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
TRAPPC9-202ENST00000438773 MUC5ACP98088 5654 aa2.54□□□□□ -2
TRAPPC9-202ENST00000438773 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2
TRAPPC9-202ENST00000438773 KRTAP5-2Q701N4 177 aa2.46□□□□□ -2.02
TRAPPC9-202ENST00000438773 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
TRAPPC9-202ENST00000438773 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
TRAPPC9-202ENST00000438773 KRTAP4-2Q9BYR5 136 aa2.37□□□□□ -2.03
TRAPPC9-202ENST00000438773 KRTAP5-8O75690 187 aa2.34□□□□□ -2.04
TRAPPC9-202ENST00000438773 KRTAP5-10Q6L8G5 202 aa2.26□□□□□ -2.05
TRAPPC9-202ENST00000438773 AHNAKQ09666 5890 aaKnown RBP2.17□□□□□ -2.06
TRAPPC9-202ENST00000438773 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.07
TRAPPC9-202ENST00000438773 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
TRAPPC9-202ENST00000438773 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
TRAPPC9-202ENST00000438773 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
TRAPPC9-202ENST00000438773 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
TRAPPC9-202ENST00000438773 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC9-202ENST00000438773 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
TRAPPC9-202ENST00000438773 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
TRAPPC9-202ENST00000438773 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 69.1 ms