RNA–Protein interactions for RNA: ENST00000438610.5

MTA1-208, Transcript of metastasis associated 1, humanhuman

TSL 1 (best)

Gene MTA1, Length 2,144 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-208ENST00000438610 KRTAP19-4Q3LI73 84 aa6.6□□□□□ -1.35
MTA1-208ENST00000438610 MT1LQ93083 61 aa6.6□□□□□ -1.35
MTA1-208ENST00000438610 KRTAP5-9P26371 169 aa6.59□□□□□ -1.35
MTA1-208ENST00000438610 MUC12Q9UKN1 5478 aa6.55□□□□□ -1.36
MTA1-208ENST00000438610 NDUFAF8A1L188 74 aa6.53□□□□□ -1.36
MTA1-208ENST00000438610 LCE3CQ5T5A8 94 aa6.53□□□□□ -1.36
MTA1-208ENST00000438610 KRTAP6-3Q3LI67 103 aa6.49□□□□□ -1.37
MTA1-208ENST00000438610 KRTAP19-3Q7Z4W3 81 aa6.49□□□□□ -1.37
MTA1-208ENST00000438610 MT1GP13640 62 aa6.44□□□□□ -1.38
MTA1-208ENST00000438610 LCE5AQ5TCM9 118 aa6.38□□□□□ -1.39
MTA1-208ENST00000438610 MDN1Q9NU22 5596 aa6.36□□□□□ -1.39
MTA1-208ENST00000438610 LCE1AQ5T7P2 110 aa6.35□□□□□ -1.39
MTA1-208ENST00000438610 KRTAP4-7Q9BYR0 210 aa6.35□□□□□ -1.39
MTA1-208ENST00000438610 MT1MQ8N339 61 aa6.34□□□□□ -1.39
MTA1-208ENST00000438610 SPRR2EP22531 72 aa6.29□□□□□ -1.4
MTA1-208ENST00000438610 SPRR2BP35325 72 aa6.29□□□□□ -1.4
MTA1-208ENST00000438610 SPRR2AP35326 72 aa6.29□□□□□ -1.4
MTA1-208ENST00000438610 KRTAP9-7A8MTY7 169 aa6.26□□□□□ -1.41
MTA1-208ENST00000438610 KRTAP4-3Q9BYR4 195 aa6.19□□□□□ -1.42
MTA1-208ENST00000438610 KRTAP9-6A8MVA2 160 aa6.15□□□□□ -1.42
MTA1-208ENST00000438610 SPRR2DP22532 72 aa6.06□□□□□ -1.44
MTA1-208ENST00000438610 NEBP20929 6669 aa6.06□□□□□ -1.44
MTA1-208ENST00000438610 DSTQ03001 7570 aaKnown RBP6.02□□□□□ -1.45
MTA1-208ENST00000438610 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
MTA1-208ENST00000438610 LCE3BQ5TA77 95 aa5.83□□□□□ -1.48
MTA1-208ENST00000438610 KRTAP2-3P0C7H8 128 aa5.78□□□□□ -1.48
MTA1-208ENST00000438610 KRTAP2-4Q9BYR9 128 aa5.78□□□□□ -1.48
MTA1-208ENST00000438610 KRTAP2-1Q9BYU5 128 aa5.78□□□□□ -1.48
MTA1-208ENST00000438610 KRTAP5-5Q701N2 237 aaPredicted RBP5.74□□□□□ -1.49
MTA1-208ENST00000438610 MT1AP04731 61 aa5.61□□□□□ -1.51
MTA1-208ENST00000438610 KRTAP2-2Q9BYT5 123 aa5.57□□□□□ -1.52
MTA1-208ENST00000438610 KRTAP20-1Q3LI63 56 aa5.56□□□□□ -1.52
MTA1-208ENST00000438610 KRTAP6-1Q3LI64 71 aa5.55□□□□□ -1.52
MTA1-208ENST00000438610 KRTAP9-4Q9BYQ2 154 aa5.53□□□□□ -1.52
MTA1-208ENST00000438610 KRTAP5-4Q6L8H1 288 aa5.5□□□□□ -1.53
MTA1-208ENST00000438610 SYNE1Q8NF91 8797 aaKnown RBP5.44□□□□□ -1.54
MTA1-208ENST00000438610 INE1O15225 51 aa5.42□□□□□ -1.54
MTA1-208ENST00000438610 LCE4AQ5TA78 99 aa5.41□□□□□ -1.54
MTA1-208ENST00000438610 KRTAP12-4P60329 112 aa5.35□□□□□ -1.55
MTA1-208ENST00000438610 KRTAP9-9Q9BYP9 154 aa5.28□□□□□ -1.56
MTA1-208ENST00000438610 MT4P47944 62 aa5.24□□□□□ -1.57
MTA1-208ENST00000438610 KRTAP4-6Q9BYQ5 205 aa5.22□□□□□ -1.57
MTA1-208ENST00000438610 KRTAP4-9Q9BYQ8 210 aa5.2□□□□□ -1.58
MTA1-208ENST00000438610 LCE1DQ5T752 114 aa5.17□□□□□ -1.58
MTA1-208ENST00000438610 HMCN1Q96RW7 5635 aa5.14□□□□□ -1.59
MTA1-208ENST00000438610 KRTAP20-2Q3LI61 65 aa5.13□□□□□ -1.59
MTA1-208ENST00000438610 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
MTA1-208ENST00000438610 MT3P25713 68 aa5.1□□□□□ -1.59
MTA1-208ENST00000438610 LCE1FQ5T754 118 aa5.07□□□□□ -1.6
MTA1-208ENST00000438610 KRTAP5-2Q701N4 177 aa4.99□□□□□ -1.61
MTA1-208ENST00000438610 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.62
MTA1-208ENST00000438610 LCE3DQ9BYE3 92 aa4.94□□□□□ -1.62
MTA1-208ENST00000438610 LCE3EQ5T5B0 92 aa4.82□□□□□ -1.64
MTA1-208ENST00000438610 OBSCNQ5VST9 7968 aa4.66□□□□□ -1.66
MTA1-208ENST00000438610 AHNAK2Q8IVF2 5795 aa4.58□□□□□ -1.68
MTA1-208ENST00000438610 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
MTA1-208ENST00000438610 KRTAP4-11Q9BYQ6 195 aa4.46□□□□□ -1.69
MTA1-208ENST00000438610 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
MTA1-208ENST00000438610 KRTAP5-1Q6L8H4 278 aa4.31□□□□□ -1.72
MTA1-208ENST00000438610 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
MTA1-208ENST00000438610 PRM1P04553 51 aa4.27□□□□□ -1.73
MTA1-208ENST00000438610 KRTAP4-12Q9BQ66 201 aa4.24□□□□□ -1.73
MTA1-208ENST00000438610 MUC5ACP98088 5654 aa4.2□□□□□ -1.74
MTA1-208ENST00000438610 GPR98Q8WXG9 6306 aa4.18□□□□□ -1.74
MTA1-208ENST00000438610 KRTAP5-7Q6L8G8 165 aa4.18□□□□□ -1.74
MTA1-208ENST00000438610 LCE1CQ5T751 118 aa4.15□□□□□ -1.75
MTA1-208ENST00000438610 LCE1BQ5T7P3 118 aa4.15□□□□□ -1.75
MTA1-208ENST00000438610 KRTAP4-2Q9BYR5 136 aa4.12□□□□□ -1.75
MTA1-208ENST00000438610 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
MTA1-208ENST00000438610 MUC5BQ9HC84 5762 aaPredicted RBP3.71□□□□□ -1.82
MTA1-208ENST00000438610 KRTAP5-11Q6L8G4 156 aa3.65□□□□□ -1.82
MTA1-208ENST00000438610 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
MTA1-208ENST00000438610 AHNAKQ09666 5890 aaKnown RBP3.5□□□□□ -1.85
MTA1-208ENST00000438610 KRTAP4-4Q9BYR3 166 aa3.2□□□□□ -1.9
MTA1-208ENST00000438610 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
MTA1-208ENST00000438610 MUC19Q7Z5P9 8384 aa2.78□□□□□ -1.96
MTA1-208ENST00000438610 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
MTA1-208ENST00000438610 MUC16Q8WXI7 14507 aa2.02□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 71 ms