RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 KRTAP4-2Q9BYR5 136 aa5.94□□□□□ -1.46
SGCE-205ENST00000437425 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
SGCE-205ENST00000437425 KRTAP6-3Q3LI67 103 aa5.89□□□□□ -1.47
SGCE-205ENST00000437425 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
SGCE-205ENST00000437425 NEBP20929 6669 aa5.81□□□□□ -1.48
SGCE-205ENST00000437425 MUC12Q9UKN1 5478 aa5.79□□□□□ -1.48
SGCE-205ENST00000437425 KRTAP19-5Q3LI72 72 aa5.73□□□□□ -1.49
SGCE-205ENST00000437425 KRTAP4-11Q9BYQ6 195 aa5.69□□□□□ -1.5
SGCE-205ENST00000437425 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
SGCE-205ENST00000437425 SPRR5A0A1B0GTR4 108 aa5.67□□□□□ -1.5
SGCE-205ENST00000437425 KRTAP20-1Q3LI63 56 aa5.66□□□□□ -1.5
SGCE-205ENST00000437425 LUZP6Q538Z0 58 aa5.64□□□□□ -1.51
SGCE-205ENST00000437425 KRTAP19-7Q3SYF9 63 aa5.63□□□□□ -1.51
SGCE-205ENST00000437425 KRTAP5-3Q6L8H2 238 aa5.59□□□□□ -1.51
SGCE-205ENST00000437425 MDN1Q9NU22 5596 aa5.57□□□□□ -1.52
SGCE-205ENST00000437425 KMT2DO14686 5537 aa5.56□□□□□ -1.52
SGCE-205ENST00000437425 MT1EP04732 61 aa5.53□□□□□ -1.52
SGCE-205ENST00000437425 LCE3CQ5T5A8 94 aa5.49□□□□□ -1.53
SGCE-205ENST00000437425 NDUFAF8A1L188 74 aa5.48□□□□□ -1.53
SGCE-205ENST00000437425 LCE4AQ5TA78 99 aa5.47□□□□□ -1.53
SGCE-205ENST00000437425 MT1LQ93083 61 aa5.44□□□□□ -1.54
SGCE-205ENST00000437425 KRTAP5-9P26371 169 aa5.43□□□□□ -1.54
SGCE-205ENST00000437425 KRTAP2-3P0C7H8 128 aa5.39□□□□□ -1.55
SGCE-205ENST00000437425 KRTAP2-4Q9BYR9 128 aa5.39□□□□□ -1.55
SGCE-205ENST00000437425 MT1GP13640 62 aa5.33□□□□□ -1.56
SGCE-205ENST00000437425 KRTAP19-3Q7Z4W3 81 aa5.33□□□□□ -1.56
SGCE-205ENST00000437425 SPRR2FQ96RM1 72 aa5.33□□□□□ -1.56
SGCE-205ENST00000437425 LCE5AQ5TCM9 118 aa5.32□□□□□ -1.56
SGCE-205ENST00000437425 SPRR2EP22531 72 aa5.23□□□□□ -1.57
SGCE-205ENST00000437425 SPRR2BP35325 72 aa5.23□□□□□ -1.57
SGCE-205ENST00000437425 SPRR2AP35326 72 aa5.23□□□□□ -1.57
SGCE-205ENST00000437425 MT1MQ8N339 61 aa5.2□□□□□ -1.58
SGCE-205ENST00000437425 KRTAP2-2Q9BYT5 123 aa5.2□□□□□ -1.58
SGCE-205ENST00000437425 KRTAP2-1Q9BYU5 128 aa5.2□□□□□ -1.58
SGCE-205ENST00000437425 LCE1AQ5T7P2 110 aa5.11□□□□□ -1.59
SGCE-205ENST00000437425 KRTAP9-6A8MVA2 160 aa5.1□□□□□ -1.59
SGCE-205ENST00000437425 SPRR2DP22532 72 aa5.05□□□□□ -1.6
SGCE-205ENST00000437425 GPR98Q8WXG9 6306 aa5.02□□□□□ -1.61
SGCE-205ENST00000437425 KRTAP4-3Q9BYR4 195 aa5.01□□□□□ -1.61
SGCE-205ENST00000437425 DSTQ03001 7570 aaKnown RBP4.89□□□□□ -1.63
SGCE-205ENST00000437425 KRTAP5-5Q701N2 237 aaPredicted RBP4.68□□□□□ -1.66
SGCE-205ENST00000437425 MT1AP04731 61 aa4.66□□□□□ -1.66
SGCE-205ENST00000437425 INE1O15225 51 aa4.65□□□□□ -1.67
SGCE-205ENST00000437425 HMCN1Q96RW7 5635 aa4.59□□□□□ -1.67
SGCE-205ENST00000437425 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
SGCE-205ENST00000437425 AHNAK2Q8IVF2 5795 aa4.53□□□□□ -1.68
SGCE-205ENST00000437425 MT4P47944 62 aa4.49□□□□□ -1.69
SGCE-205ENST00000437425 KRTAP5-10Q6L8G5 202 aa4.46□□□□□ -1.7
SGCE-205ENST00000437425 KRTAP5-4Q6L8H1 288 aa4.43□□□□□ -1.7
SGCE-205ENST00000437425 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
SGCE-205ENST00000437425 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
SGCE-205ENST00000437425 KRTAP5-7Q6L8G8 165 aa4.32□□□□□ -1.72
SGCE-205ENST00000437425 MT3P25713 68 aa4.25□□□□□ -1.73
SGCE-205ENST00000437425 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
SGCE-205ENST00000437425 LCE3DQ9BYE3 92 aa4.16□□□□□ -1.74
SGCE-205ENST00000437425 KRTAP20-2Q3LI61 65 aa4.11□□□□□ -1.75
SGCE-205ENST00000437425 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
SGCE-205ENST00000437425 LCE3EQ5T5B0 92 aa4.07□□□□□ -1.76
SGCE-205ENST00000437425 KRTAP5-2Q701N4 177 aa4.04□□□□□ -1.76
SGCE-205ENST00000437425 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.8
SGCE-205ENST00000437425 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
SGCE-205ENST00000437425 MUC5ACP98088 5654 aa3.8□□□□□ -1.8
SGCE-205ENST00000437425 MUC5BQ9HC84 5762 aaPredicted RBP3.8□□□□□ -1.8
SGCE-205ENST00000437425 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
SGCE-205ENST00000437425 KRTAP5-8O75690 187 aa3.73□□□□□ -1.81
SGCE-205ENST00000437425 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
SGCE-205ENST00000437425 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
SGCE-205ENST00000437425 PRM1P04553 51 aa3.56□□□□□ -1.84
SGCE-205ENST00000437425 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
SGCE-205ENST00000437425 KRTAP4-4Q9BYR3 166 aa3.42□□□□□ -1.86
SGCE-205ENST00000437425 LCE1CQ5T751 118 aa3.41□□□□□ -1.86
SGCE-205ENST00000437425 LCE1BQ5T7P3 118 aa3.41□□□□□ -1.86
SGCE-205ENST00000437425 KRTAP21-2Q3LI59 83 aa2.99□□□□□ -1.93
SGCE-205ENST00000437425 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
SGCE-205ENST00000437425 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
SGCE-205ENST00000437425 KRTAP21-1Q3LI58 79 aa2.23□□□□□ -2.05
SGCE-205ENST00000437425 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 108.7 ms