RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 SPRR2BP35325 72 aa6.17□□□□□ -1.42
CALD1-209ENST00000436461 SPRR2AP35326 72 aa6.17□□□□□ -1.42
CALD1-209ENST00000436461 LCE1AQ5T7P2 110 aa6.15□□□□□ -1.42
CALD1-209ENST00000436461 KRTAP23-1A1A580 65 aa6.1□□□□□ -1.43
CALD1-209ENST00000436461 KRTAP12-3P60328 96 aa6.1□□□□□ -1.43
CALD1-209ENST00000436461 LOC100996750A0A140TA64 210 aa6.04□□□□□ -1.44
CALD1-209ENST00000436461 KRTAP4-6Q9BYQ5 205 aa6.04□□□□□ -1.44
CALD1-209ENST00000436461 KRTAP19-3Q7Z4W3 81 aa6.03□□□□□ -1.44
CALD1-209ENST00000436461 PP632Q6XCG6 107 aa6.01□□□□□ -1.45
CALD1-209ENST00000436461 MT1LQ93083 61 aa5.99□□□□□ -1.45
CALD1-209ENST00000436461 LCE5AQ5TCM9 118 aa5.96□□□□□ -1.45
CALD1-209ENST00000436461 SPRR2DP22532 72 aa5.95□□□□□ -1.46
CALD1-209ENST00000436461 MT1GP13640 62 aa5.91□□□□□ -1.46
CALD1-209ENST00000436461 KRTAP15-1Q3LI76 137 aa5.85□□□□□ -1.47
CALD1-209ENST00000436461 MT1MQ8N339 61 aa5.85□□□□□ -1.47
CALD1-209ENST00000436461 DSTQ03001 7570 aaKnown RBP5.84□□□□□ -1.47
CALD1-209ENST00000436461 KRTAP4-7Q9BYR0 210 aa5.82□□□□□ -1.48
CALD1-209ENST00000436461 KRTAP20-1Q3LI63 56 aa5.81□□□□□ -1.48
CALD1-209ENST00000436461 KRTAP4-3Q9BYR4 195 aa5.79□□□□□ -1.48
CALD1-209ENST00000436461 KRTAP2-3P0C7H8 128 aa5.76□□□□□ -1.49
CALD1-209ENST00000436461 KRTAP2-4Q9BYR9 128 aa5.76□□□□□ -1.49
CALD1-209ENST00000436461 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
CALD1-209ENST00000436461 LCE3CQ5T5A8 94 aa5.66□□□□□ -1.5
CALD1-209ENST00000436461 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
CALD1-209ENST00000436461 KRTAP2-2Q9BYT5 123 aa5.61□□□□□ -1.51
CALD1-209ENST00000436461 KRTAP2-1Q9BYU5 128 aa5.61□□□□□ -1.51
CALD1-209ENST00000436461 NDUFAF8A1L188 74 aa5.54□□□□□ -1.52
CALD1-209ENST00000436461 KRTAP9-6A8MVA2 160 aa5.39□□□□□ -1.55
CALD1-209ENST00000436461 A0A0A0MQY5 61 aa5.33□□□□□ -1.56
CALD1-209ENST00000436461 KRTAP5-5Q701N2 237 aaPredicted RBP5.31□□□□□ -1.56
CALD1-209ENST00000436461 KRTAP4-12Q9BQ66 201 aa5.29□□□□□ -1.56
CALD1-209ENST00000436461 KRTAP4-9Q9BYQ8 210 aa5.28□□□□□ -1.56
CALD1-209ENST00000436461 LUZP6Q538Z0 58 aa5.27□□□□□ -1.57
CALD1-209ENST00000436461 KRTAP5-4Q6L8H1 288 aa5.26□□□□□ -1.57
CALD1-209ENST00000436461 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
CALD1-209ENST00000436461 MT4P47944 62 aa5.22□□□□□ -1.57
CALD1-209ENST00000436461 SPRR5A0A1B0GTR4 108 aa5.18□□□□□ -1.58
CALD1-209ENST00000436461 LCE1DQ5T752 114 aa5.18□□□□□ -1.58
CALD1-209ENST00000436461 SYNE1Q8NF91 8797 aaKnown RBP5.15□□□□□ -1.59
CALD1-209ENST00000436461 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
CALD1-209ENST00000436461 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
CALD1-209ENST00000436461 HMCN1Q96RW7 5635 aa5.1□□□□□ -1.59
CALD1-209ENST00000436461 MT1AP04731 61 aa5.08□□□□□ -1.6
CALD1-209ENST00000436461 KRTAP6-1Q3LI64 71 aa5.08□□□□□ -1.6
CALD1-209ENST00000436461 KRTAP12-4P60329 112 aa5.01□□□□□ -1.61
CALD1-209ENST00000436461 KRTAP20-2Q3LI61 65 aa4.96□□□□□ -1.62
CALD1-209ENST00000436461 INE1O15225 51 aa4.79□□□□□ -1.64
CALD1-209ENST00000436461 KRTAP5-3Q6L8H2 238 aa4.79□□□□□ -1.64
CALD1-209ENST00000436461 KRTAP6-2Q3LI66 62 aa4.75□□□□□ -1.65
CALD1-209ENST00000436461 AHNAK2Q8IVF2 5795 aa4.72□□□□□ -1.65
CALD1-209ENST00000436461 KRTAP5-2Q701N4 177 aa4.7□□□□□ -1.66
CALD1-209ENST00000436461 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
CALD1-209ENST00000436461 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
CALD1-209ENST00000436461 MT3P25713 68 aa4.61□□□□□ -1.67
CALD1-209ENST00000436461 GPR98Q8WXG9 6306 aa4.59□□□□□ -1.68
CALD1-209ENST00000436461 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.68
CALD1-209ENST00000436461 OBSCNQ5VST9 7968 aa4.52□□□□□ -1.69
CALD1-209ENST00000436461 KRTAP5-8O75690 187 aa4.24□□□□□ -1.73
CALD1-209ENST00000436461 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
CALD1-209ENST00000436461 LCE3DQ9BYE3 92 aa4.17□□□□□ -1.74
CALD1-209ENST00000436461 KRTAP5-1Q6L8H4 278 aa4.14□□□□□ -1.75
CALD1-209ENST00000436461 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
CALD1-209ENST00000436461 MUC5ACP98088 5654 aa4.04□□□□□ -1.76
CALD1-209ENST00000436461 LCE3EQ5T5B0 92 aa4□□□□□ -1.77
CALD1-209ENST00000436461 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
CALD1-209ENST00000436461 LCE1CQ5T751 118 aa3.81□□□□□ -1.8
CALD1-209ENST00000436461 MUC5BQ9HC84 5762 aaPredicted RBP3.8□□□□□ -1.8
CALD1-209ENST00000436461 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
CALD1-209ENST00000436461 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
CALD1-209ENST00000436461 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
CALD1-209ENST00000436461 PRM1P04553 51 aa3.34□□□□□ -1.87
CALD1-209ENST00000436461 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
CALD1-209ENST00000436461 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
CALD1-209ENST00000436461 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
CALD1-209ENST00000436461 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
CALD1-209ENST00000436461 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
CALD1-209ENST00000436461 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
CALD1-209ENST00000436461 MUC16Q8WXI7 14507 aa1.9□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 80.8 ms