RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 BIRC6Q9NR09 4857 aa6.73□□□□□ -1.33
TOP2B-204ENST00000435706 MT3P25713 68 aa6.71□□□□□ -1.34
TOP2B-204ENST00000435706 KRTAP19-7Q3SYF9 63 aa6.67□□□□□ -1.34
TOP2B-204ENST00000435706 ABCA13Q86UQ4 5058 aa6.59□□□□□ -1.36
TOP2B-204ENST00000435706 SYNE1Q8NF91 8797 aaKnown RBP6.54□□□□□ -1.36
TOP2B-204ENST00000435706 KRTAP19-6Q3LI70 58 aa6.53□□□□□ -1.36
TOP2B-204ENST00000435706 EPPK1P58107 5090 aaKnown RBP6.52□□□□□ -1.37
TOP2B-204ENST00000435706 KRTAP4-9Q9BYQ8 210 aa6.51□□□□□ -1.37
TOP2B-204ENST00000435706 LCE2DQ5TA82 110 aaPredicted RBP6.48□□□□□ -1.37
TOP2B-204ENST00000435706 HMCN2Q8NDA2 5059 aa6.45□□□□□ -1.38
TOP2B-204ENST00000435706 MT1AP04731 61 aa6.45□□□□□ -1.38
TOP2B-204ENST00000435706 KRTAP9-6A8MVA2 160 aa6.42□□□□□ -1.38
TOP2B-204ENST00000435706 UBR4Q5T4S7 5183 aa6.4□□□□□ -1.39
TOP2B-204ENST00000435706 FAT4Q6V0I7 4981 aa6.32□□□□□ -1.4
TOP2B-204ENST00000435706 RNF213Q63HN8 5207 aa6.31□□□□□ -1.4
TOP2B-204ENST00000435706 MT4P47944 62 aa6.31□□□□□ -1.4
TOP2B-204ENST00000435706 LCE1BQ5T7P3 118 aa6.29□□□□□ -1.4
TOP2B-204ENST00000435706 LCE1DQ5T752 114 aa6.26□□□□□ -1.41
TOP2B-204ENST00000435706 KRTAP6-2Q3LI66 62 aa6.15□□□□□ -1.43
TOP2B-204ENST00000435706 KRTAP6-1Q3LI64 71 aa6.11□□□□□ -1.43
TOP2B-204ENST00000435706 LCE2AQ5TA79 106 aaPredicted RBP6.1□□□□□ -1.43
TOP2B-204ENST00000435706 KRTAP9-7A8MTY7 169 aa6.02□□□□□ -1.45
TOP2B-204ENST00000435706 OBSCNQ5VST9 7968 aa5.99□□□□□ -1.45
TOP2B-204ENST00000435706 FSIP2Q5CZC0 6907 aa5.99□□□□□ -1.45
TOP2B-204ENST00000435706 MUC2Q02817 5179 aa5.98□□□□□ -1.45
TOP2B-204ENST00000435706 SYNE2Q8WXH0 6885 aaKnown RBP5.92□□□□□ -1.46
TOP2B-204ENST00000435706 KRTAP9-4Q9BYQ2 154 aa5.91□□□□□ -1.46
TOP2B-204ENST00000435706 KRTAP9-2Q9BYQ4 174 aa5.89□□□□□ -1.47
TOP2B-204ENST00000435706 LCE5AQ5TCM9 118 aa5.89□□□□□ -1.47
TOP2B-204ENST00000435706 LCE1AQ5T7P2 110 aa5.74□□□□□ -1.49
TOP2B-204ENST00000435706 FCGBPQ9Y6R7 5405 aaPredicted RBP5.58□□□□□ -1.52
TOP2B-204ENST00000435706 KRTAP2-2Q9BYT5 123 aa5.56□□□□□ -1.52
TOP2B-204ENST00000435706 USH2AO75445 5202 aa5.51□□□□□ -1.53
TOP2B-204ENST00000435706 LCE4AQ5TA78 99 aa5.4□□□□□ -1.55
TOP2B-204ENST00000435706 KRTAP6-3Q3LI67 103 aa5.39□□□□□ -1.55
TOP2B-204ENST00000435706 KMT2DO14686 5537 aa5.33□□□□□ -1.56
TOP2B-204ENST00000435706 KRTAP9-6A0A140TA67 174 aa5.27□□□□□ -1.57
TOP2B-204ENST00000435706 KRTAP20-1Q3LI63 56 aa5.24□□□□□ -1.57
TOP2B-204ENST00000435706 DSTQ03001 7570 aaKnown RBP5.22□□□□□ -1.57
TOP2B-204ENST00000435706 LCE1CQ5T751 118 aa5.17□□□□□ -1.58
TOP2B-204ENST00000435706 LCE1EQ5T753 118 aa5.17□□□□□ -1.58
TOP2B-204ENST00000435706 LCE1FQ5T754 118 aa5.17□□□□□ -1.58
TOP2B-204ENST00000435706 KRTAP4-11Q9BYQ6 195 aa5.13□□□□□ -1.59
TOP2B-204ENST00000435706 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.07□□□□□ -1.6
TOP2B-204ENST00000435706 SSPOA2VEC9 5147 aa5.01□□□□□ -1.61
TOP2B-204ENST00000435706 KRTAP5-5Q701N2 237 aaPredicted RBP4.91□□□□□ -1.62
TOP2B-204ENST00000435706 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
TOP2B-204ENST00000435706 MUC12Q9UKN1 5478 aa4.83□□□□□ -1.64
TOP2B-204ENST00000435706 KRTAP5-9P26371 169 aa4.77□□□□□ -1.65
TOP2B-204ENST00000435706 MUC19Q7Z5P9 8384 aa4.76□□□□□ -1.65
TOP2B-204ENST00000435706 KRTAP4-6Q9BYQ5 205 aa4.73□□□□□ -1.65
TOP2B-204ENST00000435706 KRTAP20-2Q3LI61 65 aa4.67□□□□□ -1.66
TOP2B-204ENST00000435706 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
TOP2B-204ENST00000435706 NEBP20929 6669 aa4.51□□□□□ -1.69
TOP2B-204ENST00000435706 KRTAP4-4Q9BYR3 166 aa4.49□□□□□ -1.69
TOP2B-204ENST00000435706 MDN1Q9NU22 5596 aa4.41□□□□□ -1.7
TOP2B-204ENST00000435706 KRTAP4-12Q9BQ66 201 aa4.24□□□□□ -1.73
TOP2B-204ENST00000435706 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
TOP2B-204ENST00000435706 KRTAP5-4Q6L8H1 288 aa4.23□□□□□ -1.73
TOP2B-204ENST00000435706 GPR98Q8WXG9 6306 aa3.93□□□□□ -1.78
TOP2B-204ENST00000435706 MUC5ACP98088 5654 aa3.92□□□□□ -1.78
TOP2B-204ENST00000435706 KRTAP5-10Q6L8G5 202 aa3.79□□□□□ -1.8
TOP2B-204ENST00000435706 HMCN1Q96RW7 5635 aa3.71□□□□□ -1.82
TOP2B-204ENST00000435706 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
TOP2B-204ENST00000435706 KRTAP5-2Q701N4 177 aa3.45□□□□□ -1.86
TOP2B-204ENST00000435706 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
TOP2B-204ENST00000435706 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
TOP2B-204ENST00000435706 KRTAP5-1Q6L8H4 278 aa3.25□□□□□ -1.89
TOP2B-204ENST00000435706 MUC5BQ9HC84 5762 aaPredicted RBP3.21□□□□□ -1.9
TOP2B-204ENST00000435706 KRTAP21-1Q3LI58 79 aa3.14□□□□□ -1.91
TOP2B-204ENST00000435706 KRTAP21-2Q3LI59 83 aa3.13□□□□□ -1.91
TOP2B-204ENST00000435706 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
TOP2B-204ENST00000435706 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
TOP2B-204ENST00000435706 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
TOP2B-204ENST00000435706 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
TOP2B-204ENST00000435706 KRTAP5-7Q6L8G8 165 aa2.47□□□□□ -2.01
TOP2B-204ENST00000435706 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms