RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 CDC42SE1Q9NRR8 79 aa0.89□□□□□ -2.27
LINC00353-201ENST00000435401 LINC00846Q9NV44 126 aa0.89□□□□□ -2.27
LINC00353-201ENST00000435401 NEBP20929 6669 aa0.89□□□□□ -2.27
LINC00353-201ENST00000435401 PDE6GP18545 87 aa0.88□□□□□ -2.27
LINC00353-201ENST00000435401 Q5VV11 94 aa0.88□□□□□ -2.27
LINC00353-201ENST00000435401 SERP1Q9Y6X1 66 aa0.88□□□□□ -2.27
LINC00353-201ENST00000435401 MUC12Q9UKN1 5478 aa0.88□□□□□ -2.27
LINC00353-201ENST00000435401 ATP5EP2Q5VTU8 51 aa0.87□□□□□ -2.27
LINC00353-201ENST00000435401 UBL5Q9BZL1 73 aa0.87□□□□□ -2.27
LINC00353-201ENST00000435401 H7BZZ5 65 aa0.86□□□□□ -2.27
LINC00353-201ENST00000435401 ATP5EP56381 51 aaPredicted RBP0.86□□□□□ -2.27
LINC00353-201ENST00000435401 KLKP1Q107X0 134 aa0.86□□□□□ -2.27
LINC00353-201ENST00000435401 KRTAP20-1Q3LI63 56 aa0.86□□□□□ -2.27
LINC00353-201ENST00000435401 CSAG1Q6PB30 78 aa0.86□□□□□ -2.27
LINC00353-201ENST00000435401 KMT2DO14686 5537 aa0.85□□□□□ -2.27
LINC00353-201ENST00000435401 TRAV22A0A0B4J277 110 aa0.85□□□□□ -2.27
LINC00353-201ENST00000435401 H0Y9P7 68 aa0.85□□□□□ -2.27
LINC00353-201ENST00000435401 NDUFC1O43677 76 aa0.85□□□□□ -2.27
LINC00353-201ENST00000435401 SPRR2EP22531 72 aa0.85□□□□□ -2.27
LINC00353-201ENST00000435401 SPRR2BP35325 72 aa0.85□□□□□ -2.27
LINC00353-201ENST00000435401 SPRR2AP35326 72 aa0.85□□□□□ -2.27
LINC00353-201ENST00000435401 KRTAP19-8Q3LI54 63 aa0.85□□□□□ -2.27
LINC00353-201ENST00000435401 C20orf197Q8N268 126 aa0.85□□□□□ -2.27
LINC00353-201ENST00000435401 BRK1Q8WUW1 75 aa0.85□□□□□ -2.27
LINC00353-201ENST00000435401 SPRR2FQ96RM1 72 aa0.85□□□□□ -2.27
LINC00353-201ENST00000435401 SPRR2GQ9BYE4 73 aa0.85□□□□□ -2.27
LINC00353-201ENST00000435401 CYP4F30PQ9H0H9 118 aa0.85□□□□□ -2.27
LINC00353-201ENST00000435401 INE1O15225 51 aa0.84□□□□□ -2.27
LINC00353-201ENST00000435401 LOC101927531A0A1B0GV80 90 aa0.83□□□□□ -2.28
LINC00353-201ENST00000435401 M0QZ58 72 aa0.83□□□□□ -2.28
LINC00353-201ENST00000435401 MT1XP80297 61 aa0.83□□□□□ -2.28
LINC00353-201ENST00000435401 LINC00208Q96KT6 92 aa0.83□□□□□ -2.28
LINC00353-201ENST00000435401 TP53AIP1Q9HCN2 124 aa0.83□□□□□ -2.28
LINC00353-201ENST00000435401 SPRR2DP22532 72 aa0.82□□□□□ -2.28
LINC00353-201ENST00000435401 ROMO1P60602 79 aa0.82□□□□□ -2.28
LINC00353-201ENST00000435401 KRTAP8-1Q8IUC2 63 aa0.82□□□□□ -2.28
LINC00353-201ENST00000435401 PLAC4Q8WY50 150 aa0.81□□□□□ -2.28
LINC00353-201ENST00000435401 KRTAP2-3P0C7H8 128 aa0.8□□□□□ -2.28
LINC00353-201ENST00000435401 KRTAP2-4Q9BYR9 128 aa0.8□□□□□ -2.28
LINC00353-201ENST00000435401 CRIPTQ9P021 101 aa0.8□□□□□ -2.28
LINC00353-201ENST00000435401 CHKB-CPT1BH3BT56 60 aa0.79□□□□□ -2.28
LINC00353-201ENST00000435401 H0YAA0 97 aa0.78□□□□□ -2.28
LINC00353-201ENST00000435401 SPTSSBQ8NFR3 76 aa0.78□□□□□ -2.28
LINC00353-201ENST00000435401 DMAC1Q96GE9 116 aa0.78□□□□□ -2.28
LINC00353-201ENST00000435401 PRR15LQ9BU68 103 aa0.78□□□□□ -2.28
LINC00353-201ENST00000435401 LINC01558Q9Y6Z2 57 aa0.78□□□□□ -2.28
LINC00353-201ENST00000435401 MDN1Q9NU22 5596 aa0.78□□□□□ -2.29
LINC00353-201ENST00000435401 A0A0D9SG42 100 aa0.77□□□□□ -2.29
LINC00353-201ENST00000435401 KRTAP2-1Q9BYU5 128 aa0.77□□□□□ -2.29
LINC00353-201ENST00000435401 ACYP2P14621 99 aa0.75□□□□□ -2.29
LINC00353-201ENST00000435401 SPATA8Q6RVD6 105 aa0.75□□□□□ -2.29
LINC00353-201ENST00000435401 MT4P47944 62 aa0.74□□□□□ -2.29
LINC00353-201ENST00000435401 MT1EP04732 61 aa0.73□□□□□ -2.29
LINC00353-201ENST00000435401 KRTAP19-5Q3LI72 72 aa0.73□□□□□ -2.29
LINC00353-201ENST00000435401 KRTAP19-7Q3SYF9 63 aa0.73□□□□□ -2.29
LINC00353-201ENST00000435401 KRTAP19-3Q7Z4W3 81 aa0.72□□□□□ -2.29
LINC00353-201ENST00000435401 A0A1B0GU69 56 aa0.71□□□□□ -2.3
LINC00353-201ENST00000435401 UQCR11O14957 56 aa0.71□□□□□ -2.3
LINC00353-201ENST00000435401 MIR22HGQ0VDD5 57 aa0.71□□□□□ -2.3
LINC00353-201ENST00000435401 C10orf95Q9H7T3 257 aa0.71□□□□□ -2.3
LINC00353-201ENST00000435401 DSTQ03001 7570 aaKnown RBP0.71□□□□□ -2.3
LINC00353-201ENST00000435401 MT1MQ8N339 61 aa0.7□□□□□ -2.3
LINC00353-201ENST00000435401 MT1LQ93083 61 aa0.69□□□□□ -2.3
LINC00353-201ENST00000435401 GPR98Q8WXG9 6306 aa0.68□□□□□ -2.3
LINC00353-201ENST00000435401 MT1GP13640 62 aa0.68□□□□□ -2.3
LINC00353-201ENST00000435401 TNP1P09430 55 aa0.67□□□□□ -2.3
LINC00353-201ENST00000435401 KRTAP20-2Q3LI61 65 aa0.64□□□□□ -2.31
LINC00353-201ENST00000435401 KRTAP6-1Q3LI64 71 aa0.61□□□□□ -2.31
LINC00353-201ENST00000435401 SYNE1Q8NF91 8797 aaKnown RBP0.61□□□□□ -2.31
LINC00353-201ENST00000435401 MT1AP04731 61 aa0.58□□□□□ -2.32
LINC00353-201ENST00000435401 KRTAP6-2Q3LI66 62 aa0.58□□□□□ -2.32
LINC00353-201ENST00000435401 AHNAKQ09666 5890 aaKnown RBP0.54□□□□□ -2.32
LINC00353-201ENST00000435401 MUC5ACP98088 5654 aa0.53□□□□□ -2.32
LINC00353-201ENST00000435401 MUC5BQ9HC84 5762 aaPredicted RBP0.53□□□□□ -2.33
LINC00353-201ENST00000435401 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
LINC00353-201ENST00000435401 PHGR1C9JFL3 82 aa0.41□□□□□ -2.34
LINC00353-201ENST00000435401 PRM1P04553 51 aa0.35□□□□□ -2.35
Retrieved 77 of 20,778 RNA–protein pairs in 61.3 ms