RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 MT1EP04732 61 aa6.53□□□□□ -1.36
CLK1-205ENST00000434813 MT1LQ93083 61 aa6.5□□□□□ -1.37
CLK1-205ENST00000434813 KRTAP9-6A8MVA2 160 aa6.5□□□□□ -1.37
CLK1-205ENST00000434813 KRTAP9-7A8MTY7 169 aa6.48□□□□□ -1.37
CLK1-205ENST00000434813 INE1O15225 51 aa6.45□□□□□ -1.38
CLK1-205ENST00000434813 KRTAP4-7Q9BYR0 210 aa6.43□□□□□ -1.38
CLK1-205ENST00000434813 KRTAP6-3Q3LI67 103 aa6.38□□□□□ -1.39
CLK1-205ENST00000434813 KRTAP2-3P0C7H8 128 aa6.26□□□□□ -1.41
CLK1-205ENST00000434813 KRTAP2-4Q9BYR9 128 aa6.26□□□□□ -1.41
CLK1-205ENST00000434813 KRTAP2-1Q9BYU5 128 aa6.26□□□□□ -1.41
CLK1-205ENST00000434813 KRTAP5-9P26371 169 aa6.25□□□□□ -1.41
CLK1-205ENST00000434813 SPRR2FQ96RM1 72 aa6.21□□□□□ -1.42
CLK1-205ENST00000434813 MUC12Q9UKN1 5478 aa6.16□□□□□ -1.42
CLK1-205ENST00000434813 KRTAP19-3Q7Z4W3 81 aa6.14□□□□□ -1.43
CLK1-205ENST00000434813 MT1MQ8N339 61 aa6.11□□□□□ -1.43
CLK1-205ENST00000434813 MT1GP13640 62 aa6.1□□□□□ -1.43
CLK1-205ENST00000434813 KRTAP4-3Q9BYR4 195 aa6.08□□□□□ -1.44
CLK1-205ENST00000434813 MDN1Q9NU22 5596 aa6.07□□□□□ -1.44
CLK1-205ENST00000434813 LOC100996750A0A140TA64 210 aa6.01□□□□□ -1.45
CLK1-205ENST00000434813 NEBP20929 6669 aa6.01□□□□□ -1.45
CLK1-205ENST00000434813 SPRR2EP22531 72 aa6.01□□□□□ -1.45
CLK1-205ENST00000434813 SPRR2BP35325 72 aa6.01□□□□□ -1.45
CLK1-205ENST00000434813 SPRR2AP35326 72 aa6.01□□□□□ -1.45
CLK1-205ENST00000434813 LCE5AQ5TCM9 118 aa5.98□□□□□ -1.45
CLK1-205ENST00000434813 LCE1AQ5T7P2 110 aa5.97□□□□□ -1.45
CLK1-205ENST00000434813 SPRR2DP22532 72 aa5.81□□□□□ -1.48
CLK1-205ENST00000434813 DSTQ03001 7570 aaKnown RBP5.74□□□□□ -1.49
CLK1-205ENST00000434813 KRTAP20-1Q3LI63 56 aa5.72□□□□□ -1.49
CLK1-205ENST00000434813 LCE3BQ5TA77 95 aa5.61□□□□□ -1.51
CLK1-205ENST00000434813 KRTAP2-2Q9BYT5 123 aa5.54□□□□□ -1.52
CLK1-205ENST00000434813 MT1AP04731 61 aa5.49□□□□□ -1.53
CLK1-205ENST00000434813 KRTAP6-1Q3LI64 71 aa5.48□□□□□ -1.53
CLK1-205ENST00000434813 KRTAP5-5Q701N2 237 aaPredicted RBP5.45□□□□□ -1.54
CLK1-205ENST00000434813 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
CLK1-205ENST00000434813 KRTAP4-9Q9BYQ8 210 aa5.33□□□□□ -1.56
CLK1-205ENST00000434813 LCE3DQ9BYE3 92 aa5.19□□□□□ -1.58
CLK1-205ENST00000434813 SYNE1Q8NF91 8797 aaKnown RBP5.18□□□□□ -1.58
CLK1-205ENST00000434813 KRTAP9-4Q9BYQ2 154 aa5.16□□□□□ -1.58
CLK1-205ENST00000434813 LCE4AQ5TA78 99 aa5.14□□□□□ -1.59
CLK1-205ENST00000434813 LCE3EQ5T5B0 92 aa5.12□□□□□ -1.59
CLK1-205ENST00000434813 KRTAP5-4Q6L8H1 288 aa5.11□□□□□ -1.59
CLK1-205ENST00000434813 MT4P47944 62 aa5.05□□□□□ -1.6
CLK1-205ENST00000434813 LCE1DQ5T752 114 aa5.02□□□□□ -1.61
CLK1-205ENST00000434813 HMCN1Q96RW7 5635 aa4.94□□□□□ -1.62
CLK1-205ENST00000434813 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
CLK1-205ENST00000434813 KRTAP4-6Q9BYQ5 205 aa4.94□□□□□ -1.62
CLK1-205ENST00000434813 MT3P25713 68 aa4.92□□□□□ -1.62
CLK1-205ENST00000434813 KRTAP20-2Q3LI61 65 aa4.8□□□□□ -1.64
CLK1-205ENST00000434813 PRM1P04553 51 aa4.8□□□□□ -1.64
CLK1-205ENST00000434813 KRTAP5-3Q6L8H2 238 aa4.63□□□□□ -1.67
CLK1-205ENST00000434813 KRTAP5-2Q701N4 177 aa4.6□□□□□ -1.67
CLK1-205ENST00000434813 OBSCNQ5VST9 7968 aa4.56□□□□□ -1.68
CLK1-205ENST00000434813 AHNAK2Q8IVF2 5795 aa4.55□□□□□ -1.68
CLK1-205ENST00000434813 GPR98Q8WXG9 6306 aa4.5□□□□□ -1.69
CLK1-205ENST00000434813 KRTAP5-10Q6L8G5 202 aa4.43□□□□□ -1.7
CLK1-205ENST00000434813 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
CLK1-205ENST00000434813 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
CLK1-205ENST00000434813 KRTAP5-7Q6L8G8 165 aa4.19□□□□□ -1.74
CLK1-205ENST00000434813 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
CLK1-205ENST00000434813 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
CLK1-205ENST00000434813 KRTAP5-8O75690 187 aa4.12□□□□□ -1.75
CLK1-205ENST00000434813 MUC5ACP98088 5654 aa4.09□□□□□ -1.75
CLK1-205ENST00000434813 KRTAP5-1Q6L8H4 278 aa4□□□□□ -1.77
CLK1-205ENST00000434813 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
CLK1-205ENST00000434813 LCE1CQ5T751 118 aa3.88□□□□□ -1.79
CLK1-205ENST00000434813 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
CLK1-205ENST00000434813 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
CLK1-205ENST00000434813 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.66□□□□□ -1.82
CLK1-205ENST00000434813 AHNAKQ09666 5890 aaKnown RBP3.6□□□□□ -1.83
CLK1-205ENST00000434813 KRTAP21-2Q3LI59 83 aa3.56□□□□□ -1.84
CLK1-205ENST00000434813 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
CLK1-205ENST00000434813 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
CLK1-205ENST00000434813 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
CLK1-205ENST00000434813 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
CLK1-205ENST00000434813 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
CLK1-205ENST00000434813 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
CLK1-205ENST00000434813 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 6 ms