RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 FCGBPQ9Y6R7 5405 aaPredicted RBP5.94□□□□□ -1.46
CTSD-204ENST00000433655 KRTAP19-4Q3LI73 84 aa5.88□□□□□ -1.47
CTSD-204ENST00000433655 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.77□□□□□ -1.49
CTSD-204ENST00000433655 MACF1Q9UPN3 7388 aaKnown RBP5.72□□□□□ -1.49
CTSD-204ENST00000433655 KRTAP2-3P0C7H8 128 aa5.67□□□□□ -1.5
CTSD-204ENST00000433655 KRTAP2-4Q9BYR9 128 aa5.67□□□□□ -1.5
CTSD-204ENST00000433655 KRTAP2-1Q9BYU5 128 aa5.67□□□□□ -1.5
CTSD-204ENST00000433655 INE1O15225 51 aa5.65□□□□□ -1.5
CTSD-204ENST00000433655 KRTAP4-3Q9BYR4 195 aa5.65□□□□□ -1.5
CTSD-204ENST00000433655 KRTAP19-3Q7Z4W3 81 aa5.64□□□□□ -1.51
CTSD-204ENST00000433655 MUC12Q9UKN1 5478 aa5.63□□□□□ -1.51
CTSD-204ENST00000433655 SYNE2Q8WXH0 6885 aaKnown RBP5.62□□□□□ -1.51
CTSD-204ENST00000433655 MT1MQ8N339 61 aa5.62□□□□□ -1.51
CTSD-204ENST00000433655 KRTAP9-7A8MTY7 169 aa5.61□□□□□ -1.51
CTSD-204ENST00000433655 MT1GP13640 62 aa5.59□□□□□ -1.51
CTSD-204ENST00000433655 LOC100996750A0A140TA64 210 aa5.57□□□□□ -1.52
CTSD-204ENST00000433655 SPRR2FQ96RM1 72 aa5.5□□□□□ -1.53
CTSD-204ENST00000433655 LCE5AQ5TCM9 118 aa5.5□□□□□ -1.53
CTSD-204ENST00000433655 KRTAP6-3Q3LI67 103 aa5.49□□□□□ -1.53
CTSD-204ENST00000433655 KRTAP5-9P26371 169 aa5.36□□□□□ -1.55
CTSD-204ENST00000433655 DSTQ03001 7570 aaKnown RBP5.28□□□□□ -1.56
CTSD-204ENST00000433655 NEBP20929 6669 aa5.24□□□□□ -1.57
CTSD-204ENST00000433655 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.57
CTSD-204ENST00000433655 MDN1Q9NU22 5596 aa5.2□□□□□ -1.58
CTSD-204ENST00000433655 SPRR2EP22531 72 aa5.13□□□□□ -1.59
CTSD-204ENST00000433655 SPRR2BP35325 72 aa5.13□□□□□ -1.59
CTSD-204ENST00000433655 SPRR2AP35326 72 aa5.13□□□□□ -1.59
CTSD-204ENST00000433655 KRTAP6-1Q3LI64 71 aa5.06□□□□□ -1.6
CTSD-204ENST00000433655 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
CTSD-204ENST00000433655 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
CTSD-204ENST00000433655 MT1AP04731 61 aa5.02□□□□□ -1.61
CTSD-204ENST00000433655 SPRR2DP22532 72 aa4.95□□□□□ -1.62
CTSD-204ENST00000433655 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
CTSD-204ENST00000433655 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
CTSD-204ENST00000433655 KRTAP12-4P60329 112 aa4.9□□□□□ -1.63
CTSD-204ENST00000433655 SYNE1Q8NF91 8797 aaKnown RBP4.8□□□□□ -1.64
CTSD-204ENST00000433655 KRTAP2-2Q9BYT5 123 aa4.76□□□□□ -1.65
CTSD-204ENST00000433655 KRTAP9-4Q9BYQ2 154 aa4.73□□□□□ -1.65
CTSD-204ENST00000433655 LCE3DQ9BYE3 92 aa4.68□□□□□ -1.66
CTSD-204ENST00000433655 LCE3EQ5T5B0 92 aa4.61□□□□□ -1.67
CTSD-204ENST00000433655 KRTAP6-2Q3LI66 62 aa4.55□□□□□ -1.68
CTSD-204ENST00000433655 KRTAP5-4Q6L8H1 288 aa4.53□□□□□ -1.68
CTSD-204ENST00000433655 MT3P25713 68 aa4.48□□□□□ -1.69
CTSD-204ENST00000433655 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
CTSD-204ENST00000433655 PRM1P04553 51 aa4.33□□□□□ -1.72
CTSD-204ENST00000433655 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
CTSD-204ENST00000433655 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
CTSD-204ENST00000433655 MT4P47944 62 aa4.31□□□□□ -1.72
CTSD-204ENST00000433655 HMCN1Q96RW7 5635 aa4.26□□□□□ -1.73
CTSD-204ENST00000433655 KRTAP20-2Q3LI61 65 aa4.22□□□□□ -1.73
CTSD-204ENST00000433655 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
CTSD-204ENST00000433655 KRTAP5-2Q701N4 177 aa4.21□□□□□ -1.74
CTSD-204ENST00000433655 KRTAP5-3Q6L8H2 238 aa4.06□□□□□ -1.76
CTSD-204ENST00000433655 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
CTSD-204ENST00000433655 AHNAK2Q8IVF2 5795 aa4.01□□□□□ -1.77
CTSD-204ENST00000433655 KRTAP5-10Q6L8G5 202 aa3.85□□□□□ -1.79
CTSD-204ENST00000433655 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
CTSD-204ENST00000433655 LCE1EQ5T753 118 aa3.75□□□□□ -1.81
CTSD-204ENST00000433655 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
CTSD-204ENST00000433655 KRTAP5-7Q6L8G8 165 aa3.66□□□□□ -1.82
CTSD-204ENST00000433655 LCE1BQ5T7P3 118 aa3.62□□□□□ -1.83
CTSD-204ENST00000433655 KRTAP5-1Q6L8H4 278 aa3.58□□□□□ -1.84
CTSD-204ENST00000433655 KRTAP4-2Q9BYR5 136 aa3.58□□□□□ -1.84
CTSD-204ENST00000433655 KRTAP5-8O75690 187 aa3.54□□□□□ -1.84
CTSD-204ENST00000433655 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
CTSD-204ENST00000433655 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
CTSD-204ENST00000433655 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
CTSD-204ENST00000433655 KRTAP21-2Q3LI59 83 aa3.3□□□□□ -1.88
CTSD-204ENST00000433655 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
CTSD-204ENST00000433655 AHNAKQ09666 5890 aaKnown RBP3.24□□□□□ -1.89
CTSD-204ENST00000433655 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
CTSD-204ENST00000433655 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
CTSD-204ENST00000433655 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
CTSD-204ENST00000433655 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
CTSD-204ENST00000433655 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
CTSD-204ENST00000433655 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
CTSD-204ENST00000433655 MUC19Q7Z5P9 8384 aa2.61□□□□□ -1.99
CTSD-204ENST00000433655 MUC16Q8WXI7 14507 aa1.76□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 112.1 ms