RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 KRTAP12-4P60329 112 aa3.79□□□□□ -1.8
HMGCS1-202ENST00000433297 MT1EP04732 61 aa3.79□□□□□ -1.8
HMGCS1-202ENST00000433297 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
HMGCS1-202ENST00000433297 MT1GP13640 62 aa3.75□□□□□ -1.81
HMGCS1-202ENST00000433297 FSIP2Q5CZC0 6907 aa3.75□□□□□ -1.81
HMGCS1-202ENST00000433297 DSTQ03001 7570 aaKnown RBP3.72□□□□□ -1.81
HMGCS1-202ENST00000433297 FCGBPQ9Y6R7 5405 aaPredicted RBP3.68□□□□□ -1.82
HMGCS1-202ENST00000433297 KRTAP19-4Q3LI73 84 aa3.68□□□□□ -1.82
HMGCS1-202ENST00000433297 MUC12Q9UKN1 5478 aa3.63□□□□□ -1.83
HMGCS1-202ENST00000433297 SYNE1Q8NF91 8797 aaKnown RBP3.61□□□□□ -1.83
HMGCS1-202ENST00000433297 KRTAP4-9Q9BYQ8 210 aa3.58□□□□□ -1.84
HMGCS1-202ENST00000433297 LCE3BQ5TA77 95 aa3.58□□□□□ -1.84
HMGCS1-202ENST00000433297 KRTAP4-6Q9BYQ5 205 aa3.56□□□□□ -1.84
HMGCS1-202ENST00000433297 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
HMGCS1-202ENST00000433297 MT1MQ8N339 61 aa3.53□□□□□ -1.84
HMGCS1-202ENST00000433297 KRTAP9-7A8MTY7 169 aa3.49□□□□□ -1.85
HMGCS1-202ENST00000433297 KRTAP19-3Q7Z4W3 81 aa3.49□□□□□ -1.85
HMGCS1-202ENST00000433297 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.47□□□□□ -1.85
HMGCS1-202ENST00000433297 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.85
HMGCS1-202ENST00000433297 PRM1P04553 51 aa3.4□□□□□ -1.87
HMGCS1-202ENST00000433297 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
HMGCS1-202ENST00000433297 KRTAP19-6Q3LI70 58 aa3.36□□□□□ -1.87
HMGCS1-202ENST00000433297 SYNE2Q8WXH0 6885 aaKnown RBP3.35□□□□□ -1.87
HMGCS1-202ENST00000433297 LCE3EQ5T5B0 92 aa3.35□□□□□ -1.87
HMGCS1-202ENST00000433297 SPRR2FQ96RM1 72 aa3.34□□□□□ -1.88
HMGCS1-202ENST00000433297 KRTAP6-1Q3LI64 71 aa3.32□□□□□ -1.88
HMGCS1-202ENST00000433297 KRTAP6-3Q3LI67 103 aa3.29□□□□□ -1.88
HMGCS1-202ENST00000433297 MT1AP04731 61 aa3.29□□□□□ -1.88
HMGCS1-202ENST00000433297 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
HMGCS1-202ENST00000433297 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
HMGCS1-202ENST00000433297 KRTAP6-2Q3LI66 62 aa3.17□□□□□ -1.9
HMGCS1-202ENST00000433297 MACF1Q9UPN3 7388 aaKnown RBP3.16□□□□□ -1.9
HMGCS1-202ENST00000433297 MDN1Q9NU22 5596 aa3.13□□□□□ -1.91
HMGCS1-202ENST00000433297 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
HMGCS1-202ENST00000433297 NEBP20929 6669 aa3.05□□□□□ -1.92
HMGCS1-202ENST00000433297 KRTAP5-9P26371 169 aa3.04□□□□□ -1.92
HMGCS1-202ENST00000433297 LCE1AQ5T7P2 110 aa3□□□□□ -1.93
HMGCS1-202ENST00000433297 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
HMGCS1-202ENST00000433297 KRTAP2-2Q9BYT5 123 aa2.97□□□□□ -1.93
HMGCS1-202ENST00000433297 SPRR2EP22531 72 aa2.91□□□□□ -1.94
HMGCS1-202ENST00000433297 SPRR2BP35325 72 aa2.91□□□□□ -1.94
HMGCS1-202ENST00000433297 SPRR2AP35326 72 aa2.91□□□□□ -1.94
HMGCS1-202ENST00000433297 MT3P25713 68 aa2.88□□□□□ -1.95
HMGCS1-202ENST00000433297 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
HMGCS1-202ENST00000433297 SPRR2DP22532 72 aa2.78□□□□□ -1.96
HMGCS1-202ENST00000433297 LCE1EQ5T753 118 aa2.78□□□□□ -1.96
HMGCS1-202ENST00000433297 KRTAP9-9Q9BYP9 154 aa2.71□□□□□ -1.98
HMGCS1-202ENST00000433297 LCE1DQ5T752 114 aa2.69□□□□□ -1.98
HMGCS1-202ENST00000433297 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
HMGCS1-202ENST00000433297 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
HMGCS1-202ENST00000433297 KRTAP5-3Q6L8H2 238 aa2.61□□□□□ -1.99
HMGCS1-202ENST00000433297 KRTAP4-11Q9BYQ6 195 aa2.58□□□□□ -2
HMGCS1-202ENST00000433297 LCE4AQ5TA78 99 aa2.57□□□□□ -2
HMGCS1-202ENST00000433297 MT4P47944 62 aa2.55□□□□□ -2
HMGCS1-202ENST00000433297 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
HMGCS1-202ENST00000433297 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
HMGCS1-202ENST00000433297 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
HMGCS1-202ENST00000433297 KRTAP5-7Q6L8G8 165 aa2.4□□□□□ -2.03
HMGCS1-202ENST00000433297 KRTAP5-10Q6L8G5 202 aa2.39□□□□□ -2.03
HMGCS1-202ENST00000433297 KRTAP20-2Q3LI61 65 aa2.38□□□□□ -2.03
HMGCS1-202ENST00000433297 AHNAK2Q8IVF2 5795 aa2.36□□□□□ -2.03
HMGCS1-202ENST00000433297 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.03
HMGCS1-202ENST00000433297 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
HMGCS1-202ENST00000433297 KRTAP5-2Q701N4 177 aa2.31□□□□□ -2.04
HMGCS1-202ENST00000433297 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
HMGCS1-202ENST00000433297 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
HMGCS1-202ENST00000433297 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
HMGCS1-202ENST00000433297 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
HMGCS1-202ENST00000433297 LCE1FQ5T754 118 aa2.1□□□□□ -2.07
HMGCS1-202ENST00000433297 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
HMGCS1-202ENST00000433297 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
HMGCS1-202ENST00000433297 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
HMGCS1-202ENST00000433297 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
HMGCS1-202ENST00000433297 KRTAP5-8O75690 187 aa2□□□□□ -2.09
HMGCS1-202ENST00000433297 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
HMGCS1-202ENST00000433297 PHGR1C9JFL3 82 aa1.52□□□□□ -2.17
HMGCS1-202ENST00000433297 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 91.7 ms