RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 MT1LQ93083 61 aa9.45□□□□□ -0.9
TMEM248-205ENST00000433271 KRTAP19-3Q7Z4W3 81 aa9.43□□□□□ -0.9
TMEM248-205ENST00000433271 SPRR2EP22531 72 aa9.42□□□□□ -0.9
TMEM248-205ENST00000433271 SPRR2BP35325 72 aa9.42□□□□□ -0.9
TMEM248-205ENST00000433271 SPRR2AP35326 72 aa9.42□□□□□ -0.9
TMEM248-205ENST00000433271 MDN1Q9NU22 5596 aa9.42□□□□□ -0.9
TMEM248-205ENST00000433271 SVIPQ8NHG7 77 aa9.37□□□□□ -0.91
TMEM248-205ENST00000433271 MT1GP13640 62 aa9.32□□□□□ -0.92
TMEM248-205ENST00000433271 LCE5AQ5TCM9 118 aa9.31□□□□□ -0.92
TMEM248-205ENST00000433271 KRTAP19-4Q3LI73 84 aa9.27□□□□□ -0.93
TMEM248-205ENST00000433271 NEBP20929 6669 aa9.21□□□□□ -0.93
TMEM248-205ENST00000433271 MT1MQ8N339 61 aa9.16□□□□□ -0.94
TMEM248-205ENST00000433271 LCE3CQ5T5A8 94 aa9.1□□□□□ -0.95
TMEM248-205ENST00000433271 SPRR2DP22532 72 aa9.09□□□□□ -0.95
TMEM248-205ENST00000433271 KRTAP4-7Q9BYR0 210 aa9.06□□□□□ -0.96
TMEM248-205ENST00000433271 KRTAP4-3Q9BYR4 195 aa8.94□□□□□ -0.98
TMEM248-205ENST00000433271 LCE3BQ5TA77 95 aa8.77□□□□□ -1.01
TMEM248-205ENST00000433271 DSTQ03001 7570 aaKnown RBP8.76□□□□□ -1.01
TMEM248-205ENST00000433271 KRTAP2-3P0C7H8 128 aa8.73□□□□□ -1.01
TMEM248-205ENST00000433271 KRTAP2-4Q9BYR9 128 aa8.73□□□□□ -1.01
TMEM248-205ENST00000433271 KRTAP20-1Q3LI63 56 aa8.68□□□□□ -1.02
TMEM248-205ENST00000433271 SPRR5A0A1B0GTR4 108 aa8.66□□□□□ -1.02
TMEM248-205ENST00000433271 KRTAP9-6A8MVA2 160 aa8.57□□□□□ -1.04
TMEM248-205ENST00000433271 LOC100996750A0A140TA64 210 aa8.53□□□□□ -1.04
TMEM248-205ENST00000433271 KRTAP2-2Q9BYT5 123 aa8.52□□□□□ -1.05
TMEM248-205ENST00000433271 KRTAP2-1Q9BYU5 128 aa8.52□□□□□ -1.05
TMEM248-205ENST00000433271 H3BS24 57 aa8.43□□□□□ -1.06
TMEM248-205ENST00000433271 KRTAP4-6Q9BYQ5 205 aa8.32□□□□□ -1.08
TMEM248-205ENST00000433271 KRTAP5-5Q701N2 237 aaPredicted RBP8.32□□□□□ -1.08
TMEM248-205ENST00000433271 LUZP6Q538Z0 58 aa8.16□□□□□ -1.1
TMEM248-205ENST00000433271 KRTAP5-4Q6L8H1 288 aa8.15□□□□□ -1.1
TMEM248-205ENST00000433271 LCE4AQ5TA78 99 aa8.09□□□□□ -1.11
TMEM248-205ENST00000433271 MT1AP04731 61 aa8.04□□□□□ -1.12
TMEM248-205ENST00000433271 KRTAP6-1Q3LI64 71 aa7.96□□□□□ -1.14
TMEM248-205ENST00000433271 KRTAP4-9Q9BYQ8 210 aa7.9□□□□□ -1.14
TMEM248-205ENST00000433271 MT4P47944 62 aa7.89□□□□□ -1.15
TMEM248-205ENST00000433271 KRTAP12-4P60329 112 aa7.85□□□□□ -1.15
TMEM248-205ENST00000433271 LCE1DQ5T752 114 aa7.84□□□□□ -1.15
TMEM248-205ENST00000433271 SYNE1Q8NF91 8797 aaKnown RBP7.77□□□□□ -1.17
TMEM248-205ENST00000433271 KRTAP9-4Q9BYQ2 154 aa7.68□□□□□ -1.18
TMEM248-205ENST00000433271 HMCN1Q96RW7 5635 aa7.68□□□□□ -1.18
TMEM248-205ENST00000433271 KRTAP4-12Q9BQ66 201 aa7.65□□□□□ -1.18
TMEM248-205ENST00000433271 KRTAP20-2Q3LI61 65 aa7.62□□□□□ -1.19
TMEM248-205ENST00000433271 NDUFAF8A1L188 74 aa7.61□□□□□ -1.19
TMEM248-205ENST00000433271 KRTAP6-2Q3LI66 62 aa7.41□□□□□ -1.22
TMEM248-205ENST00000433271 KRTAP5-3Q6L8H2 238 aa7.37□□□□□ -1.23
TMEM248-205ENST00000433271 MT3P25713 68 aa7.32□□□□□ -1.24
TMEM248-205ENST00000433271 KRTAP5-2Q701N4 177 aa7.32□□□□□ -1.24
TMEM248-205ENST00000433271 KRTAP9-9Q9BYP9 154 aa7.27□□□□□ -1.25
TMEM248-205ENST00000433271 GPR98Q8WXG9 6306 aa7.26□□□□□ -1.25
TMEM248-205ENST00000433271 AHNAK2Q8IVF2 5795 aa6.96□□□□□ -1.3
TMEM248-205ENST00000433271 LCE3DQ9BYE3 92 aa6.77□□□□□ -1.33
TMEM248-205ENST00000433271 KRTAP5-10Q6L8G5 202 aa6.76□□□□□ -1.33
TMEM248-205ENST00000433271 KRTAP4-11Q9BYQ6 195 aa6.72□□□□□ -1.33
TMEM248-205ENST00000433271 OBSCNQ5VST9 7968 aa6.69□□□□□ -1.34
TMEM248-205ENST00000433271 A0A0A0MQY5 61 aa6.58□□□□□ -1.36
TMEM248-205ENST00000433271 LCE3EQ5T5B0 92 aa6.54□□□□□ -1.36
TMEM248-205ENST00000433271 KRTAP4-2Q9BYR5 136 aa6.5□□□□□ -1.37
TMEM248-205ENST00000433271 LCE1EQ5T753 118 aa6.48□□□□□ -1.37
TMEM248-205ENST00000433271 KRTAP5-8O75690 187 aa6.47□□□□□ -1.37
TMEM248-205ENST00000433271 KRTAP5-1Q6L8H4 278 aa6.39□□□□□ -1.39
TMEM248-205ENST00000433271 KRTAP5-7Q6L8G8 165 aa6.34□□□□□ -1.39
TMEM248-205ENST00000433271 INE1O15225 51 aa6.3□□□□□ -1.4
TMEM248-205ENST00000433271 MUC5ACP98088 5654 aa6.11□□□□□ -1.43
TMEM248-205ENST00000433271 LCE1CQ5T751 118 aa6.03□□□□□ -1.44
TMEM248-205ENST00000433271 LCE1BQ5T7P3 118 aa6.03□□□□□ -1.44
TMEM248-205ENST00000433271 MUC5BQ9HC84 5762 aaPredicted RBP5.61□□□□□ -1.51
TMEM248-205ENST00000433271 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.6□□□□□ -1.51
TMEM248-205ENST00000433271 AHNAKQ09666 5890 aaKnown RBP5.55□□□□□ -1.52
TMEM248-205ENST00000433271 PRM1P04553 51 aa5.48□□□□□ -1.53
TMEM248-205ENST00000433271 KRTAP5-11Q6L8G4 156 aa5.34□□□□□ -1.55
TMEM248-205ENST00000433271 KRTAP21-2Q3LI59 83 aa5.23□□□□□ -1.57
TMEM248-205ENST00000433271 LCE1FQ5T754 118 aa4.96□□□□□ -1.62
TMEM248-205ENST00000433271 KRTAP4-4Q9BYR3 166 aa4.64□□□□□ -1.67
TMEM248-205ENST00000433271 PHGR1C9JFL3 82 aa4.6□□□□□ -1.67
TMEM248-205ENST00000433271 MUC19Q7Z5P9 8384 aa4.03□□□□□ -1.76
TMEM248-205ENST00000433271 KRTAP21-1Q3LI58 79 aa3.28□□□□□ -1.88
TMEM248-205ENST00000433271 MUC16Q8WXI7 14507 aa2.87□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms