RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 TNXBP22105 4242 aa3.46□□□□□ -1.86
SEC16A-206ENST00000431893 EPPK1P58107 5090 aaKnown RBP3.46□□□□□ -1.86
SEC16A-206ENST00000431893 MT3P25713 68 aa3.44□□□□□ -1.86
SEC16A-206ENST00000431893 KRTAP20-1Q3LI63 56 aa3.43□□□□□ -1.86
SEC16A-206ENST00000431893 FLGP20930 4061 aaPredicted RBP3.41□□□□□ -1.86
SEC16A-206ENST00000431893 LRP2P98164 4655 aa3.39□□□□□ -1.87
SEC16A-206ENST00000431893 MUC17Q685J3 4493 aa3.37□□□□□ -1.87
SEC16A-206ENST00000431893 KRTAP9-7A8MTY7 169 aa3.34□□□□□ -1.88
SEC16A-206ENST00000431893 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
SEC16A-206ENST00000431893 ABCA13Q86UQ4 5058 aa3.31□□□□□ -1.88
SEC16A-206ENST00000431893 KRTAP19-2Q3LHN2 52 aa3.28□□□□□ -1.88
SEC16A-206ENST00000431893 LCE2AQ5TA79 106 aaPredicted RBP3.27□□□□□ -1.89
SEC16A-206ENST00000431893 KRTAP19-6Q3LI70 58 aa3.25□□□□□ -1.89
SEC16A-206ENST00000431893 SYNE2Q8WXH0 6885 aaKnown RBP3.22□□□□□ -1.89
SEC16A-206ENST00000431893 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
SEC16A-206ENST00000431893 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
SEC16A-206ENST00000431893 KRTAP2-1Q9BYU5 128 aa3.22□□□□□ -1.89
SEC16A-206ENST00000431893 KRTAP6-2Q3LI66 62 aa3.18□□□□□ -1.9
SEC16A-206ENST00000431893 MT1AP04731 61 aa3.17□□□□□ -1.9
SEC16A-206ENST00000431893 KRTAP19-7Q3SYF9 63 aa3.15□□□□□ -1.9
SEC16A-206ENST00000431893 FAT4Q6V0I7 4981 aa3.12□□□□□ -1.91
SEC16A-206ENST00000431893 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
SEC16A-206ENST00000431893 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.1□□□□□ -1.91
SEC16A-206ENST00000431893 RNF213Q63HN8 5207 aa3.1□□□□□ -1.91
SEC16A-206ENST00000431893 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
SEC16A-206ENST00000431893 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
SEC16A-206ENST00000431893 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
SEC16A-206ENST00000431893 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.91
SEC16A-206ENST00000431893 FSIP2Q5CZC0 6907 aa3.09□□□□□ -1.91
SEC16A-206ENST00000431893 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
SEC16A-206ENST00000431893 UBR4Q5T4S7 5183 aa3.04□□□□□ -1.92
SEC16A-206ENST00000431893 KRTAP9-6A8MVA2 160 aa3.03□□□□□ -1.92
SEC16A-206ENST00000431893 HMCN2Q8NDA2 5059 aa3.01□□□□□ -1.93
SEC16A-206ENST00000431893 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
SEC16A-206ENST00000431893 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
SEC16A-206ENST00000431893 LCE4AQ5TA78 99 aa2.9□□□□□ -1.95
SEC16A-206ENST00000431893 MUC2Q02817 5179 aa2.82□□□□□ -1.96
SEC16A-206ENST00000431893 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
SEC16A-206ENST00000431893 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.96
SEC16A-206ENST00000431893 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
SEC16A-206ENST00000431893 OBSCNQ5VST9 7968 aa2.73□□□□□ -1.97
SEC16A-206ENST00000431893 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
SEC16A-206ENST00000431893 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -1.99
SEC16A-206ENST00000431893 MACF1Q9UPN3 7388 aaKnown RBP2.57□□□□□ -2
SEC16A-206ENST00000431893 NEBP20929 6669 aa2.57□□□□□ -2
SEC16A-206ENST00000431893 KMT2DO14686 5537 aa2.55□□□□□ -2
SEC16A-206ENST00000431893 USH2AO75445 5202 aa2.53□□□□□ -2
SEC16A-206ENST00000431893 KRTAP5-9P26371 169 aa2.53□□□□□ -2.01
SEC16A-206ENST00000431893 SSPOA2VEC9 5147 aa2.51□□□□□ -2.01
SEC16A-206ENST00000431893 KRTAP4-6Q9BYQ5 205 aa2.5□□□□□ -2.01
SEC16A-206ENST00000431893 KRTAP4-12Q9BQ66 201 aa2.49□□□□□ -2.01
SEC16A-206ENST00000431893 KRTAP4-2Q9BYR5 136 aa2.49□□□□□ -2.01
SEC16A-206ENST00000431893 GPR98Q8WXG9 6306 aa2.47□□□□□ -2.01
SEC16A-206ENST00000431893 FCGBPQ9Y6R7 5405 aaPredicted RBP2.46□□□□□ -2.02
SEC16A-206ENST00000431893 DSTQ03001 7570 aaKnown RBP2.43□□□□□ -2.02
SEC16A-206ENST00000431893 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
SEC16A-206ENST00000431893 KRTAP5-4Q6L8H1 288 aa2.21□□□□□ -2.06
SEC16A-206ENST00000431893 MUC12Q9UKN1 5478 aa2.16□□□□□ -2.06
SEC16A-206ENST00000431893 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
SEC16A-206ENST00000431893 MDN1Q9NU22 5596 aa2.09□□□□□ -2.07
SEC16A-206ENST00000431893 KRTAP5-3Q6L8H2 238 aa2.03□□□□□ -2.08
SEC16A-206ENST00000431893 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
SEC16A-206ENST00000431893 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
SEC16A-206ENST00000431893 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
SEC16A-206ENST00000431893 MUC5ACP98088 5654 aa1.75□□□□□ -2.13
SEC16A-206ENST00000431893 AHNAK2Q8IVF2 5795 aa1.74□□□□□ -2.13
SEC16A-206ENST00000431893 KRTAP5-10Q6L8G5 202 aa1.72□□□□□ -2.13
SEC16A-206ENST00000431893 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
SEC16A-206ENST00000431893 KRTAP5-7Q6L8G8 165 aa1.66□□□□□ -2.14
SEC16A-206ENST00000431893 KRTAP5-1Q6L8H4 278 aa1.58□□□□□ -2.16
SEC16A-206ENST00000431893 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
SEC16A-206ENST00000431893 MUC5BQ9HC84 5762 aaPredicted RBP1.48□□□□□ -2.17
SEC16A-206ENST00000431893 KRTAP5-11Q6L8G4 156 aa1.43□□□□□ -2.18
SEC16A-206ENST00000431893 KRTAP21-2Q3LI59 83 aa1.41□□□□□ -2.18
SEC16A-206ENST00000431893 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
SEC16A-206ENST00000431893 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.34□□□□□ -2.19
SEC16A-206ENST00000431893 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 41.5 ms