RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 KRTAP2-2Q9BYT5 123 aa3.34□□□□□ -1.88
NUP98-207ENST00000429801 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
NUP98-207ENST00000429801 KRTAP4-8A0A0G2JLE6 195 aa3.27□□□□□ -1.89
NUP98-207ENST00000429801 LCE3BQ5TA77 95 aa3.27□□□□□ -1.89
NUP98-207ENST00000429801 MACF1Q9UPN3 7388 aaKnown RBP3.26□□□□□ -1.89
NUP98-207ENST00000429801 KMT2DO14686 5537 aa3.26□□□□□ -1.89
NUP98-207ENST00000429801 KRTAP8-1Q8IUC2 63 aa3.24□□□□□ -1.89
NUP98-207ENST00000429801 LCE1FQ5T754 118 aa3.22□□□□□ -1.89
NUP98-207ENST00000429801 KRTAP19-5Q3LI72 72 aa3.18□□□□□ -1.9
NUP98-207ENST00000429801 KRTAP12-3P60328 96 aa3.17□□□□□ -1.9
NUP98-207ENST00000429801 SYNE2Q8WXH0 6885 aaKnown RBP3.16□□□□□ -1.9
NUP98-207ENST00000429801 KRTAP19-7Q3SYF9 63 aa3.15□□□□□ -1.91
NUP98-207ENST00000429801 KRTAP5-9P26371 169 aa3.13□□□□□ -1.91
NUP98-207ENST00000429801 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
NUP98-207ENST00000429801 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
NUP98-207ENST00000429801 MT1EP04732 61 aa3.11□□□□□ -1.91
NUP98-207ENST00000429801 LCE1AQ5T7P2 110 aa3.11□□□□□ -1.91
NUP98-207ENST00000429801 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
NUP98-207ENST00000429801 LCE1DQ5T752 114 aa3.03□□□□□ -1.92
NUP98-207ENST00000429801 MT1LQ93083 61 aa3.03□□□□□ -1.92
NUP98-207ENST00000429801 KRTAP19-3Q7Z4W3 81 aa3.02□□□□□ -1.93
NUP98-207ENST00000429801 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
NUP98-207ENST00000429801 MT3P25713 68 aa3.01□□□□□ -1.93
NUP98-207ENST00000429801 KRTAP2-3P0C7H8 128 aa3□□□□□ -1.93
NUP98-207ENST00000429801 KRTAP2-4Q9BYR9 128 aa3□□□□□ -1.93
NUP98-207ENST00000429801 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
NUP98-207ENST00000429801 MT1GP13640 62 aa2.99□□□□□ -1.93
NUP98-207ENST00000429801 SPRR2EP22531 72 aa2.99□□□□□ -1.93
NUP98-207ENST00000429801 SPRR2BP35325 72 aa2.99□□□□□ -1.93
NUP98-207ENST00000429801 SPRR2AP35326 72 aa2.99□□□□□ -1.93
NUP98-207ENST00000429801 MDN1Q9NU22 5596 aa2.99□□□□□ -1.93
NUP98-207ENST00000429801 KRTAP9-6A8MVA2 160 aa2.96□□□□□ -1.94
NUP98-207ENST00000429801 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
NUP98-207ENST00000429801 MT1MQ8N339 61 aa2.93□□□□□ -1.94
NUP98-207ENST00000429801 KRTAP4-9Q9BYQ8 210 aa2.91□□□□□ -1.94
NUP98-207ENST00000429801 KRTAP4-7Q9BYR0 210 aa2.9□□□□□ -1.94
NUP98-207ENST00000429801 SPRR2DP22532 72 aa2.89□□□□□ -1.95
NUP98-207ENST00000429801 NEBP20929 6669 aa2.89□□□□□ -1.95
NUP98-207ENST00000429801 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
NUP98-207ENST00000429801 KRTAP12-4P60329 112 aa2.87□□□□□ -1.95
NUP98-207ENST00000429801 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
NUP98-207ENST00000429801 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
NUP98-207ENST00000429801 DSTQ03001 7570 aaKnown RBP2.81□□□□□ -1.96
NUP98-207ENST00000429801 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
NUP98-207ENST00000429801 KRTAP20-1Q3LI63 56 aa2.73□□□□□ -1.97
NUP98-207ENST00000429801 PRM1P04553 51 aa2.65□□□□□ -1.99
NUP98-207ENST00000429801 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
NUP98-207ENST00000429801 SYNE1Q8NF91 8797 aaKnown RBP2.59□□□□□ -1.99
NUP98-207ENST00000429801 MT1AP04731 61 aa2.59□□□□□ -2
NUP98-207ENST00000429801 KRTAP5-4Q6L8H1 288 aa2.59□□□□□ -2
NUP98-207ENST00000429801 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
NUP98-207ENST00000429801 KRTAP6-1Q3LI64 71 aa2.54□□□□□ -2
NUP98-207ENST00000429801 OBSCNQ5VST9 7968 aa2.54□□□□□ -2
NUP98-207ENST00000429801 MT4P47944 62 aa2.5□□□□□ -2.01
NUP98-207ENST00000429801 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
NUP98-207ENST00000429801 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
NUP98-207ENST00000429801 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
NUP98-207ENST00000429801 KRTAP5-3Q6L8H2 238 aa2.37□□□□□ -2.03
NUP98-207ENST00000429801 KRTAP5-2Q701N4 177 aa2.32□□□□□ -2.04
NUP98-207ENST00000429801 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
NUP98-207ENST00000429801 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
NUP98-207ENST00000429801 KRTAP5-10Q6L8G5 202 aa2.11□□□□□ -2.07
NUP98-207ENST00000429801 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.08
NUP98-207ENST00000429801 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
NUP98-207ENST00000429801 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
NUP98-207ENST00000429801 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
NUP98-207ENST00000429801 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
NUP98-207ENST00000429801 LCE1BQ5T7P3 118 aa1.93□□□□□ -2.1
NUP98-207ENST00000429801 LCE1CQ5T751 118 aa1.93□□□□□ -2.1
NUP98-207ENST00000429801 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
NUP98-207ENST00000429801 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
NUP98-207ENST00000429801 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
NUP98-207ENST00000429801 AHNAKQ09666 5890 aaKnown RBP1.7□□□□□ -2.14
NUP98-207ENST00000429801 KRTAP21-1Q3LI58 79 aa1.7□□□□□ -2.14
NUP98-207ENST00000429801 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
NUP98-207ENST00000429801 KRTAP4-4Q9BYR3 166 aa1.52□□□□□ -2.17
NUP98-207ENST00000429801 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
NUP98-207ENST00000429801 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 97.8 ms