RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 SSPOA2VEC9 5147 aa2.17□□□□□ -2.06
HMGB3P5-201ENST00000428894 RPS29P62273 56 aaKnown RBP2.17□□□□□ -2.06
HMGB3P5-201ENST00000428894 COX6B2Q6YFQ2 88 aa2.17□□□□□ -2.06
HMGB3P5-201ENST00000428894 FLGP20930 4061 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P5-201ENST00000428894 A0A0G2JQZ4 141 aa2.16□□□□□ -2.06
HMGB3P5-201ENST00000428894 DEFB105AQ8NG35 78 aa2.16□□□□□ -2.06
HMGB3P5-201ENST00000428894 USH2AO75445 5202 aa2.15□□□□□ -2.06
HMGB3P5-201ENST00000428894 PRLHP81277 87 aa2.15□□□□□ -2.07
HMGB3P5-201ENST00000428894 FCGBPQ9Y6R7 5405 aaPredicted RBP2.15□□□□□ -2.07
HMGB3P5-201ENST00000428894 MACF1Q9UPN3 7388 aaKnown RBP2.15□□□□□ -2.07
HMGB3P5-201ENST00000428894 CRIPTQ9P021 101 aa2.14□□□□□ -2.07
HMGB3P5-201ENST00000428894 PRO2289Q9P1D8 64 aa2.13□□□□□ -2.07
HMGB3P5-201ENST00000428894 MMP24-AS1A0A0U1RRL7 71 aa2.12□□□□□ -2.07
HMGB3P5-201ENST00000428894 Q6ZRX8 168 aa2.11□□□□□ -2.07
HMGB3P5-201ENST00000428894 MRPL34Q9BQ48 92 aaKnown RBP2.11□□□□□ -2.07
HMGB3P5-201ENST00000428894 R4GN34 69 aa2.1□□□□□ -2.07
HMGB3P5-201ENST00000428894 C9orf92A6NGG3 77 aa2.09□□□□□ -2.07
HMGB3P5-201ENST00000428894 KRTAP6-3Q3LI67 103 aa2.09□□□□□ -2.07
HMGB3P5-201ENST00000428894 RPL37P61927 97 aaKnown RBP2.07□□□□□ -2.08
HMGB3P5-201ENST00000428894 PLAC4Q8WY50 150 aa2.07□□□□□ -2.08
HMGB3P5-201ENST00000428894 H0YAA0 97 aa2.06□□□□□ -2.08
HMGB3P5-201ENST00000428894 SPRR1AP35321 89 aa2.06□□□□□ -2.08
HMGB3P5-201ENST00000428894 KRTAP20-1Q3LI63 56 aa2.04□□□□□ -2.08
HMGB3P5-201ENST00000428894 KRTAP19-6Q3LI70 58 aa2.04□□□□□ -2.08
HMGB3P5-201ENST00000428894 H1FX-AS1Q4G0G2 97 aa2.04□□□□□ -2.08
HMGB3P5-201ENST00000428894 INE1O15225 51 aa2.03□□□□□ -2.08
HMGB3P5-201ENST00000428894 MT2AP02795 61 aa2.02□□□□□ -2.09
HMGB3P5-201ENST00000428894 MUC12Q9UKN1 5478 aa2.01□□□□□ -2.09
HMGB3P5-201ENST00000428894 NEBP20929 6669 aa2□□□□□ -2.09
HMGB3P5-201ENST00000428894 MT1FP04733 61 aa1.99□□□□□ -2.09
HMGB3P5-201ENST00000428894 SPRR1BP22528 89 aa1.99□□□□□ -2.09
HMGB3P5-201ENST00000428894 C10orf95Q9H7T3 257 aa1.98□□□□□ -2.09
HMGB3P5-201ENST00000428894 KRTAP2-3P0C7H8 128 aa1.95□□□□□ -2.1
HMGB3P5-201ENST00000428894 KRTAP2-4Q9BYR9 128 aa1.95□□□□□ -2.1
HMGB3P5-201ENST00000428894 KMT2DO14686 5537 aa1.9□□□□□ -2.11
HMGB3P5-201ENST00000428894 MDN1Q9NU22 5596 aa1.89□□□□□ -2.11
HMGB3P5-201ENST00000428894 KRTAP2-1Q9BYU5 128 aa1.88□□□□□ -2.11
HMGB3P5-201ENST00000428894 S4R3F8 94 aa1.87□□□□□ -2.11
HMGB3P5-201ENST00000428894 A0A0D9SG42 100 aa1.86□□□□□ -2.11
HMGB3P5-201ENST00000428894 SPRR2EP22531 72 aa1.82□□□□□ -2.12
HMGB3P5-201ENST00000428894 SPRR2BP35325 72 aa1.82□□□□□ -2.12
HMGB3P5-201ENST00000428894 SPRR2AP35326 72 aa1.82□□□□□ -2.12
HMGB3P5-201ENST00000428894 SPRR2FQ96RM1 72 aa1.79□□□□□ -2.12
HMGB3P5-201ENST00000428894 MT1BP07438 61 aa1.78□□□□□ -2.12
HMGB3P5-201ENST00000428894 KRTAP13-4Q3LI77 160 aa1.78□□□□□ -2.12
HMGB3P5-201ENST00000428894 KRTAP19-8Q3LI54 63 aa1.77□□□□□ -2.13
HMGB3P5-201ENST00000428894 SPRR2DP22532 72 aa1.76□□□□□ -2.13
HMGB3P5-201ENST00000428894 SPRR2GQ9BYE4 73 aa1.75□□□□□ -2.13
HMGB3P5-201ENST00000428894 KRTAP12-1P59990 96 aa1.74□□□□□ -2.13
HMGB3P5-201ENST00000428894 KRTAP8-1Q8IUC2 63 aa1.73□□□□□ -2.13
HMGB3P5-201ENST00000428894 GPR98Q8WXG9 6306 aa1.73□□□□□ -2.13
HMGB3P5-201ENST00000428894 M0QZ58 72 aa1.71□□□□□ -2.14
HMGB3P5-201ENST00000428894 DSTQ03001 7570 aaKnown RBP1.71□□□□□ -2.14
HMGB3P5-201ENST00000428894 MT1XP80297 61 aa1.61□□□□□ -2.15
HMGB3P5-201ENST00000428894 KRTAP5-10Q6L8G5 202 aa1.58□□□□□ -2.16
HMGB3P5-201ENST00000428894 TNP1P09430 55 aa1.57□□□□□ -2.16
HMGB3P5-201ENST00000428894 MT4P47944 62 aa1.55□□□□□ -2.16
HMGB3P5-201ENST00000428894 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
HMGB3P5-201ENST00000428894 KRTAP19-3Q7Z4W3 81 aa1.51□□□□□ -2.17
HMGB3P5-201ENST00000428894 MT1GP13640 62 aa1.47□□□□□ -2.17
HMGB3P5-201ENST00000428894 MT1EP04732 61 aa1.45□□□□□ -2.18
HMGB3P5-201ENST00000428894 KRTAP19-7Q3SYF9 63 aa1.45□□□□□ -2.18
HMGB3P5-201ENST00000428894 KRTAP20-2Q3LI61 65 aa1.4□□□□□ -2.19
HMGB3P5-201ENST00000428894 MT1MQ8N339 61 aa1.4□□□□□ -2.19
HMGB3P5-201ENST00000428894 KRTAP19-5Q3LI72 72 aa1.36□□□□□ -2.19
HMGB3P5-201ENST00000428894 MT1LQ93083 61 aa1.35□□□□□ -2.19
HMGB3P5-201ENST00000428894 SYNE1Q8NF91 8797 aaKnown RBP1.34□□□□□ -2.2
HMGB3P5-201ENST00000428894 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
HMGB3P5-201ENST00000428894 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
HMGB3P5-201ENST00000428894 MUC5ACP98088 5654 aa1.31□□□□□ -2.2
HMGB3P5-201ENST00000428894 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
HMGB3P5-201ENST00000428894 PRM1P04553 51 aa1.16□□□□□ -2.22
HMGB3P5-201ENST00000428894 MT1AP04731 61 aa1.16□□□□□ -2.22
HMGB3P5-201ENST00000428894 KRTAP6-1Q3LI64 71 aa1.15□□□□□ -2.23
HMGB3P5-201ENST00000428894 KRTAP6-2Q3LI66 62 aa1.14□□□□□ -2.23
HMGB3P5-201ENST00000428894 PHGR1C9JFL3 82 aa0.95□□□□□ -2.26
HMGB3P5-201ENST00000428894 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 744.7 ms