RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.76
HIPK2-203ENST00000428878 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
HIPK2-203ENST00000428878 KRTAP9-7A8MTY7 169 aa4.02□□□□□ -1.77
HIPK2-203ENST00000428878 KRTAP19-6Q3LI70 58 aa3.98□□□□□ -1.77
HIPK2-203ENST00000428878 NEBP20929 6669 aa3.95□□□□□ -1.78
HIPK2-203ENST00000428878 KRTAP4-3Q9BYR4 195 aa3.92□□□□□ -1.78
HIPK2-203ENST00000428878 INE1O15225 51 aa3.9□□□□□ -1.79
HIPK2-203ENST00000428878 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
HIPK2-203ENST00000428878 MT1GP13640 62 aa3.86□□□□□ -1.79
HIPK2-203ENST00000428878 KRTAP19-7Q3SYF9 63 aa3.86□□□□□ -1.79
HIPK2-203ENST00000428878 SPRR2EP22531 72 aa3.85□□□□□ -1.79
HIPK2-203ENST00000428878 SPRR2BP35325 72 aa3.85□□□□□ -1.79
HIPK2-203ENST00000428878 SPRR2AP35326 72 aa3.85□□□□□ -1.79
HIPK2-203ENST00000428878 KRTAP5-9P26371 169 aa3.84□□□□□ -1.79
HIPK2-203ENST00000428878 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.8
HIPK2-203ENST00000428878 MT1EP04732 61 aa3.83□□□□□ -1.8
HIPK2-203ENST00000428878 LOC100996750A0A140TA64 210 aa3.81□□□□□ -1.8
HIPK2-203ENST00000428878 MDN1Q9NU22 5596 aa3.8□□□□□ -1.8
HIPK2-203ENST00000428878 MT1LQ93083 61 aa3.79□□□□□ -1.8
HIPK2-203ENST00000428878 KRTAP19-3Q7Z4W3 81 aa3.72□□□□□ -1.81
HIPK2-203ENST00000428878 SPRR2DP22532 72 aa3.67□□□□□ -1.82
HIPK2-203ENST00000428878 MT1MQ8N339 61 aa3.65□□□□□ -1.82
HIPK2-203ENST00000428878 KRTAP9-6A8MVA2 160 aa3.63□□□□□ -1.83
HIPK2-203ENST00000428878 LCE3BQ5TA77 95 aa3.61□□□□□ -1.83
HIPK2-203ENST00000428878 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
HIPK2-203ENST00000428878 LCE1AQ5T7P2 110 aa3.52□□□□□ -1.85
HIPK2-203ENST00000428878 LCE5AQ5TCM9 118 aa3.46□□□□□ -1.86
HIPK2-203ENST00000428878 MT4P47944 62 aa3.44□□□□□ -1.86
HIPK2-203ENST00000428878 KRTAP4-9Q9BYQ8 210 aa3.42□□□□□ -1.86
HIPK2-203ENST00000428878 KRTAP20-1Q3LI63 56 aa3.4□□□□□ -1.87
HIPK2-203ENST00000428878 KRTAP2-3P0C7H8 128 aa3.34□□□□□ -1.88
HIPK2-203ENST00000428878 KRTAP2-4Q9BYR9 128 aa3.34□□□□□ -1.88
HIPK2-203ENST00000428878 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
HIPK2-203ENST00000428878 KRTAP6-1Q3LI64 71 aa3.31□□□□□ -1.88
HIPK2-203ENST00000428878 KRTAP12-4P60329 112 aa3.26□□□□□ -1.89
HIPK2-203ENST00000428878 KRTAP2-1Q9BYU5 128 aa3.22□□□□□ -1.89
HIPK2-203ENST00000428878 MT1AP04731 61 aa3.16□□□□□ -1.9
HIPK2-203ENST00000428878 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
HIPK2-203ENST00000428878 MUC19Q7Z5P9 8384 aa3.13□□□□□ -1.91
HIPK2-203ENST00000428878 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
HIPK2-203ENST00000428878 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
HIPK2-203ENST00000428878 HMCN1Q96RW7 5635 aa3.13□□□□□ -1.91
HIPK2-203ENST00000428878 KRTAP5-10Q6L8G5 202 aa3.12□□□□□ -1.91
HIPK2-203ENST00000428878 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
HIPK2-203ENST00000428878 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
HIPK2-203ENST00000428878 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
HIPK2-203ENST00000428878 MT3P25713 68 aa3.02□□□□□ -1.93
HIPK2-203ENST00000428878 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
HIPK2-203ENST00000428878 KRTAP5-7Q6L8G8 165 aa3□□□□□ -1.93
HIPK2-203ENST00000428878 KRTAP9-4Q9BYQ2 154 aa2.99□□□□□ -1.93
HIPK2-203ENST00000428878 LCE1DQ5T752 114 aa2.99□□□□□ -1.93
HIPK2-203ENST00000428878 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
HIPK2-203ENST00000428878 GPR98Q8WXG9 6306 aa2.92□□□□□ -1.94
HIPK2-203ENST00000428878 LCE1EQ5T753 118 aa2.92□□□□□ -1.94
HIPK2-203ENST00000428878 KRTAP5-3Q6L8H2 238 aa2.9□□□□□ -1.95
HIPK2-203ENST00000428878 LCE4AQ5TA78 99 aa2.85□□□□□ -1.95
HIPK2-203ENST00000428878 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
HIPK2-203ENST00000428878 PRM1P04553 51 aa2.82□□□□□ -1.96
HIPK2-203ENST00000428878 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
HIPK2-203ENST00000428878 MUC5ACP98088 5654 aa2.77□□□□□ -1.97
HIPK2-203ENST00000428878 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
HIPK2-203ENST00000428878 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
HIPK2-203ENST00000428878 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
HIPK2-203ENST00000428878 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
HIPK2-203ENST00000428878 KRTAP4-11Q9BYQ6 195 aa2.51□□□□□ -2.01
HIPK2-203ENST00000428878 KRTAP5-1Q6L8H4 278 aa2.46□□□□□ -2.02
HIPK2-203ENST00000428878 KRTAP4-12Q9BQ66 201 aa2.41□□□□□ -2.02
HIPK2-203ENST00000428878 KRTAP4-2Q9BYR5 136 aa2.41□□□□□ -2.02
HIPK2-203ENST00000428878 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
HIPK2-203ENST00000428878 KRTAP9-9Q9BYP9 154 aa2.31□□□□□ -2.04
HIPK2-203ENST00000428878 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
HIPK2-203ENST00000428878 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
HIPK2-203ENST00000428878 KRTAP5-11Q6L8G4 156 aa2.06□□□□□ -2.08
HIPK2-203ENST00000428878 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
HIPK2-203ENST00000428878 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
HIPK2-203ENST00000428878 PHGR1C9JFL3 82 aa1.65□□□□□ -2.14
HIPK2-203ENST00000428878 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 81 ms