RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 KRTAP25-1Q3LHN0 102 aa3.49□□□□□ -1.85
SMC6-204ENST00000428868 KTN1-AS1Q86SY8 53 aa3.47□□□□□ -1.85
SMC6-204ENST00000428868 LCE3AQ5TA76 89 aa3.46□□□□□ -1.86
SMC6-204ENST00000428868 LCE5AQ5TCM9 118 aa3.45□□□□□ -1.86
SMC6-204ENST00000428868 KRTAP2-3P0C7H8 128 aa3.44□□□□□ -1.86
SMC6-204ENST00000428868 KRTAP2-4Q9BYR9 128 aa3.44□□□□□ -1.86
SMC6-204ENST00000428868 MDN1Q9NU22 5596 aa3.44□□□□□ -1.86
SMC6-204ENST00000428868 LCE4AQ5TA78 99 aa3.43□□□□□ -1.86
SMC6-204ENST00000428868 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
SMC6-204ENST00000428868 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.87
SMC6-204ENST00000428868 KRTAP19-5Q3LI72 72 aa3.34□□□□□ -1.87
SMC6-204ENST00000428868 KRTAP8-1Q8IUC2 63 aa3.34□□□□□ -1.87
SMC6-204ENST00000428868 KRTAP19-7Q3SYF9 63 aa3.32□□□□□ -1.88
SMC6-204ENST00000428868 KRTAP2-2Q9BYT5 123 aa3.32□□□□□ -1.88
SMC6-204ENST00000428868 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
SMC6-204ENST00000428868 PP632Q6XCG6 107 aa3.31□□□□□ -1.88
SMC6-204ENST00000428868 SVIPQ8NHG7 77 aa3.29□□□□□ -1.88
SMC6-204ENST00000428868 KRTAP12-3P60328 96 aa3.27□□□□□ -1.89
SMC6-204ENST00000428868 MT1EP04732 61 aa3.26□□□□□ -1.89
SMC6-204ENST00000428868 SPRR2EP22531 72 aa3.26□□□□□ -1.89
SMC6-204ENST00000428868 SPRR2BP35325 72 aa3.26□□□□□ -1.89
SMC6-204ENST00000428868 SPRR2AP35326 72 aa3.26□□□□□ -1.89
SMC6-204ENST00000428868 SPRR2FQ96RM1 72 aa3.24□□□□□ -1.89
SMC6-204ENST00000428868 GPR98Q8WXG9 6306 aa3.22□□□□□ -1.89
SMC6-204ENST00000428868 KRTAP15-1Q3LI76 137 aa3.18□□□□□ -1.9
SMC6-204ENST00000428868 MT1LQ93083 61 aa3.18□□□□□ -1.9
SMC6-204ENST00000428868 SPRR2DP22532 72 aa3.16□□□□□ -1.9
SMC6-204ENST00000428868 LCE1AQ5T7P2 110 aa3.15□□□□□ -1.91
SMC6-204ENST00000428868 KRTAP19-3Q7Z4W3 81 aa3.12□□□□□ -1.91
SMC6-204ENST00000428868 MT1MQ8N339 61 aa3.08□□□□□ -1.92
SMC6-204ENST00000428868 KRTAP4-3Q9BYR4 195 aa3.07□□□□□ -1.92
SMC6-204ENST00000428868 LCE3CQ5T5A8 94 aa3.06□□□□□ -1.92
SMC6-204ENST00000428868 MT1GP13640 62 aa3.05□□□□□ -1.92
SMC6-204ENST00000428868 DSTQ03001 7570 aaKnown RBP3.04□□□□□ -1.92
SMC6-204ENST00000428868 SPRR5A0A1B0GTR4 108 aa2.98□□□□□ -1.93
SMC6-204ENST00000428868 KRTAP9-6A8MVA2 160 aa2.97□□□□□ -1.93
SMC6-204ENST00000428868 KRTAP19-4Q3LI73 84 aa2.95□□□□□ -1.94
SMC6-204ENST00000428868 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.88□□□□□ -1.95
SMC6-204ENST00000428868 HMCN1Q96RW7 5635 aa2.86□□□□□ -1.95
SMC6-204ENST00000428868 AHNAK2Q8IVF2 5795 aa2.84□□□□□ -1.95
SMC6-204ENST00000428868 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.95
SMC6-204ENST00000428868 MT4P47944 62 aa2.81□□□□□ -1.96
SMC6-204ENST00000428868 KRTAP5-5Q701N2 237 aaPredicted RBP2.79□□□□□ -1.96
SMC6-204ENST00000428868 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
SMC6-204ENST00000428868 LUZP6Q538Z0 58 aa2.73□□□□□ -1.97
SMC6-204ENST00000428868 NDUFAF8A1L188 74 aa2.7□□□□□ -1.98
SMC6-204ENST00000428868 KRTAP6-1Q3LI64 71 aa2.7□□□□□ -1.98
SMC6-204ENST00000428868 MT1AP04731 61 aa2.69□□□□□ -1.98
SMC6-204ENST00000428868 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
SMC6-204ENST00000428868 SYNE1Q8NF91 8797 aaKnown RBP2.64□□□□□ -1.99
SMC6-204ENST00000428868 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
SMC6-204ENST00000428868 KRTAP12-4P60329 112 aa2.53□□□□□ -2
SMC6-204ENST00000428868 KRTAP20-2Q3LI61 65 aa2.52□□□□□ -2.01
SMC6-204ENST00000428868 KRTAP6-2Q3LI66 62 aa2.48□□□□□ -2.01
SMC6-204ENST00000428868 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
SMC6-204ENST00000428868 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
SMC6-204ENST00000428868 KRTAP5-2Q701N4 177 aa2.43□□□□□ -2.02
SMC6-204ENST00000428868 MUC5ACP98088 5654 aa2.4□□□□□ -2.02
SMC6-204ENST00000428868 MT3P25713 68 aa2.4□□□□□ -2.03
SMC6-204ENST00000428868 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
SMC6-204ENST00000428868 KRTAP4-4Q9BYR3 166 aa2.39□□□□□ -2.03
SMC6-204ENST00000428868 KRTAP5-8O75690 187 aa2.34□□□□□ -2.03
SMC6-204ENST00000428868 A0A0A0MQY5 61 aa2.26□□□□□ -2.05
SMC6-204ENST00000428868 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
SMC6-204ENST00000428868 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
SMC6-204ENST00000428868 H3BS24 57 aa2.2□□□□□ -2.06
SMC6-204ENST00000428868 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
SMC6-204ENST00000428868 LCE1EQ5T753 118 aa2.17□□□□□ -2.06
SMC6-204ENST00000428868 INE1O15225 51 aa2.15□□□□□ -2.07
SMC6-204ENST00000428868 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
SMC6-204ENST00000428868 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
SMC6-204ENST00000428868 PRM1P04553 51 aa1.92□□□□□ -2.1
SMC6-204ENST00000428868 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
SMC6-204ENST00000428868 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
SMC6-204ENST00000428868 LCE1FQ5T754 118 aa1.63□□□□□ -2.15
SMC6-204ENST00000428868 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
SMC6-204ENST00000428868 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.2
SMC6-204ENST00000428868 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 263.2 ms