RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 SPRR2FQ96RM1 72 aa4.05□□□□□ -1.76
CRIM1-204ENST00000428774 MUC12Q9UKN1 5478 aa4.02□□□□□ -1.77
CRIM1-204ENST00000428774 KRTAP12-3P60328 96 aa4□□□□□ -1.77
CRIM1-204ENST00000428774 MT1EP04732 61 aa3.98□□□□□ -1.77
CRIM1-204ENST00000428774 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
CRIM1-204ENST00000428774 KRTAP4-12Q9BQ66 201 aa3.94□□□□□ -1.78
CRIM1-204ENST00000428774 SPRR2EP22531 72 aa3.93□□□□□ -1.78
CRIM1-204ENST00000428774 SPRR2BP35325 72 aa3.93□□□□□ -1.78
CRIM1-204ENST00000428774 SPRR2AP35326 72 aa3.93□□□□□ -1.78
CRIM1-204ENST00000428774 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
CRIM1-204ENST00000428774 KRTAP15-1Q3LI76 137 aa3.89□□□□□ -1.79
CRIM1-204ENST00000428774 MT1LQ93083 61 aa3.89□□□□□ -1.79
CRIM1-204ENST00000428774 KRTAP19-4Q3LI73 84 aa3.87□□□□□ -1.79
CRIM1-204ENST00000428774 LCE3BQ5TA77 95 aa3.85□□□□□ -1.79
CRIM1-204ENST00000428774 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
CRIM1-204ENST00000428774 GPR98Q8WXG9 6306 aa3.84□□□□□ -1.79
CRIM1-204ENST00000428774 KRTAP2-3P0C7H8 128 aa3.79□□□□□ -1.8
CRIM1-204ENST00000428774 SPRR2DP22532 72 aa3.79□□□□□ -1.8
CRIM1-204ENST00000428774 LCE5AQ5TCM9 118 aa3.79□□□□□ -1.8
CRIM1-204ENST00000428774 KRTAP2-4Q9BYR9 128 aa3.79□□□□□ -1.8
CRIM1-204ENST00000428774 MT1GP13640 62 aa3.77□□□□□ -1.81
CRIM1-204ENST00000428774 MT1MQ8N339 61 aa3.77□□□□□ -1.81
CRIM1-204ENST00000428774 KRTAP9-9Q9BYP9 154 aa3.75□□□□□ -1.81
CRIM1-204ENST00000428774 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
CRIM1-204ENST00000428774 KRTAP4-7Q9BYR0 210 aa3.75□□□□□ -1.81
CRIM1-204ENST00000428774 LCE4AQ5TA78 99 aa3.74□□□□□ -1.81
CRIM1-204ENST00000428774 LCE3CQ5T5A8 94 aa3.73□□□□□ -1.81
CRIM1-204ENST00000428774 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
CRIM1-204ENST00000428774 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
CRIM1-204ENST00000428774 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
CRIM1-204ENST00000428774 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
CRIM1-204ENST00000428774 LCE1DQ5T752 114 aa3.6□□□□□ -1.83
CRIM1-204ENST00000428774 KRTAP9-6A8MVA2 160 aa3.56□□□□□ -1.84
CRIM1-204ENST00000428774 DSTQ03001 7570 aaKnown RBP3.52□□□□□ -1.85
CRIM1-204ENST00000428774 KRTAP4-9Q9BYQ8 210 aa3.47□□□□□ -1.85
CRIM1-204ENST00000428774 A0A0A0MQY5 61 aa3.45□□□□□ -1.86
CRIM1-204ENST00000428774 KRTAP5-5Q701N2 237 aaPredicted RBP3.41□□□□□ -1.86
CRIM1-204ENST00000428774 KRTAP4-11Q9BYQ6 195 aa3.38□□□□□ -1.87
CRIM1-204ENST00000428774 LUZP6Q538Z0 58 aa3.35□□□□□ -1.87
CRIM1-204ENST00000428774 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
CRIM1-204ENST00000428774 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
CRIM1-204ENST00000428774 MT4P47944 62 aa3.33□□□□□ -1.88
CRIM1-204ENST00000428774 MT1AP04731 61 aa3.31□□□□□ -1.88
CRIM1-204ENST00000428774 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
CRIM1-204ENST00000428774 AHNAK2Q8IVF2 5795 aa3.24□□□□□ -1.89
CRIM1-204ENST00000428774 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
CRIM1-204ENST00000428774 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
CRIM1-204ENST00000428774 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
CRIM1-204ENST00000428774 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
CRIM1-204ENST00000428774 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
CRIM1-204ENST00000428774 KRTAP12-4P60329 112 aa3.14□□□□□ -1.91
CRIM1-204ENST00000428774 KRTAP5-7Q6L8G8 165 aa3.11□□□□□ -1.91
CRIM1-204ENST00000428774 KRTAP5-3Q6L8H2 238 aa3.06□□□□□ -1.92
CRIM1-204ENST00000428774 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
CRIM1-204ENST00000428774 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
CRIM1-204ENST00000428774 MT3P25713 68 aa2.96□□□□□ -1.94
CRIM1-204ENST00000428774 AHNAKQ09666 5890 aaKnown RBP2.9□□□□□ -1.94
CRIM1-204ENST00000428774 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
CRIM1-204ENST00000428774 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
CRIM1-204ENST00000428774 MUC5BQ9HC84 5762 aaPredicted RBP2.74□□□□□ -1.97
CRIM1-204ENST00000428774 KRTAP5-8O75690 187 aa2.72□□□□□ -1.97
CRIM1-204ENST00000428774 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
CRIM1-204ENST00000428774 OBSCNQ5VST9 7968 aa2.67□□□□□ -1.98
CRIM1-204ENST00000428774 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
CRIM1-204ENST00000428774 INE1O15225 51 aa2.63□□□□□ -1.99
CRIM1-204ENST00000428774 LCE1EQ5T753 118 aa2.6□□□□□ -1.99
CRIM1-204ENST00000428774 LCE1BQ5T7P3 118 aa2.46□□□□□ -2.02
CRIM1-204ENST00000428774 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
CRIM1-204ENST00000428774 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
CRIM1-204ENST00000428774 PRM1P04553 51 aa2.3□□□□□ -2.04
CRIM1-204ENST00000428774 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
CRIM1-204ENST00000428774 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
CRIM1-204ENST00000428774 KRTAP21-2Q3LI59 83 aa2.15□□□□□ -2.07
CRIM1-204ENST00000428774 KRTAP4-4Q9BYR3 166 aa1.93□□□□□ -2.1
CRIM1-204ENST00000428774 PHGR1C9JFL3 82 aa1.92□□□□□ -2.1
CRIM1-204ENST00000428774 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
CRIM1-204ENST00000428774 KRTAP21-1Q3LI58 79 aa1.45□□□□□ -2.18
CRIM1-204ENST00000428774 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms