RNA–Protein interactions for RNA: ENST00000428494.6

GHDC-203, Transcript of GH3 domain containing, humanhuman

TSL 5 BASIC

Gene GHDC, Length 2,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-203ENST00000428494 FCGBPQ9Y6R7 5405 aaPredicted RBP5.39□□□□□ -1.55
GHDC-203ENST00000428494 MT1LQ93083 61 aa5.39□□□□□ -1.55
GHDC-203ENST00000428494 MT1EP04732 61 aa5.36□□□□□ -1.55
GHDC-203ENST00000428494 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.27□□□□□ -1.57
GHDC-203ENST00000428494 MUC12Q9UKN1 5478 aa5.24□□□□□ -1.57
GHDC-203ENST00000428494 KRTAP19-6Q3LI70 58 aa5.24□□□□□ -1.57
GHDC-203ENST00000428494 LOC100996750A0A140TA64 210 aa5.23□□□□□ -1.57
GHDC-203ENST00000428494 MACF1Q9UPN3 7388 aaKnown RBP5.22□□□□□ -1.57
GHDC-203ENST00000428494 KRTAP19-4Q3LI73 84 aa5.22□□□□□ -1.57
GHDC-203ENST00000428494 KRTAP4-3Q9BYR4 195 aa5.22□□□□□ -1.57
GHDC-203ENST00000428494 SYNE2Q8WXH0 6885 aaKnown RBP5.21□□□□□ -1.58
GHDC-203ENST00000428494 KRTAP9-7A8MTY7 169 aa5.19□□□□□ -1.58
GHDC-203ENST00000428494 MT1GP13640 62 aa5.12□□□□□ -1.59
GHDC-203ENST00000428494 DSTQ03001 7570 aaKnown RBP5.1□□□□□ -1.59
GHDC-203ENST00000428494 MT1MQ8N339 61 aa5□□□□□ -1.61
GHDC-203ENST00000428494 KRTAP19-3Q7Z4W3 81 aa4.97□□□□□ -1.61
GHDC-203ENST00000428494 KRTAP6-3Q3LI67 103 aa4.91□□□□□ -1.62
GHDC-203ENST00000428494 KRTAP12-4P60329 112 aa4.89□□□□□ -1.63
GHDC-203ENST00000428494 MDN1Q9NU22 5596 aa4.8□□□□□ -1.64
GHDC-203ENST00000428494 LCE5AQ5TCM9 118 aa4.78□□□□□ -1.64
GHDC-203ENST00000428494 SPRR2FQ96RM1 72 aa4.78□□□□□ -1.64
GHDC-203ENST00000428494 NEBP20929 6669 aa4.77□□□□□ -1.65
GHDC-203ENST00000428494 LCE3BQ5TA77 95 aa4.77□□□□□ -1.65
GHDC-203ENST00000428494 KRTAP4-9Q9BYQ8 210 aa4.76□□□□□ -1.65
GHDC-203ENST00000428494 SYNE1Q8NF91 8797 aaKnown RBP4.76□□□□□ -1.65
GHDC-203ENST00000428494 KRTAP5-9P26371 169 aa4.72□□□□□ -1.65
GHDC-203ENST00000428494 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
GHDC-203ENST00000428494 SPRR2EP22531 72 aa4.59□□□□□ -1.67
GHDC-203ENST00000428494 SPRR2BP35325 72 aa4.59□□□□□ -1.67
GHDC-203ENST00000428494 SPRR2AP35326 72 aa4.59□□□□□ -1.67
GHDC-203ENST00000428494 KRTAP20-1Q3LI63 56 aa4.54□□□□□ -1.68
GHDC-203ENST00000428494 MT1AP04731 61 aa4.52□□□□□ -1.69
GHDC-203ENST00000428494 LCE1AQ5T7P2 110 aa4.51□□□□□ -1.69
GHDC-203ENST00000428494 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
GHDC-203ENST00000428494 SPRR2DP22532 72 aa4.43□□□□□ -1.7
GHDC-203ENST00000428494 OBSCNQ5VST9 7968 aa4.42□□□□□ -1.7
GHDC-203ENST00000428494 LCE3EQ5T5B0 92 aa4.42□□□□□ -1.7
GHDC-203ENST00000428494 KRTAP5-5Q701N2 237 aaPredicted RBP4.4□□□□□ -1.7
GHDC-203ENST00000428494 KRTAP2-2Q9BYT5 123 aa4.37□□□□□ -1.71
GHDC-203ENST00000428494 PRM1P04553 51 aa4.34□□□□□ -1.71
GHDC-203ENST00000428494 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
GHDC-203ENST00000428494 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
GHDC-203ENST00000428494 MT3P25713 68 aa4.01□□□□□ -1.77
GHDC-203ENST00000428494 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
GHDC-203ENST00000428494 MT4P47944 62 aa3.92□□□□□ -1.78
GHDC-203ENST00000428494 LCE1DQ5T752 114 aa3.9□□□□□ -1.79
GHDC-203ENST00000428494 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
GHDC-203ENST00000428494 LCE4AQ5TA78 99 aa3.85□□□□□ -1.79
GHDC-203ENST00000428494 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
GHDC-203ENST00000428494 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
GHDC-203ENST00000428494 KRTAP4-6Q9BYQ5 205 aa3.79□□□□□ -1.8
GHDC-203ENST00000428494 AHNAK2Q8IVF2 5795 aa3.66□□□□□ -1.82
GHDC-203ENST00000428494 KRTAP20-2Q3LI61 65 aa3.62□□□□□ -1.83
GHDC-203ENST00000428494 MUC5ACP98088 5654 aa3.56□□□□□ -1.84
GHDC-203ENST00000428494 KRTAP5-10Q6L8G5 202 aa3.52□□□□□ -1.85
GHDC-203ENST00000428494 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
GHDC-203ENST00000428494 KRTAP5-3Q6L8H2 238 aa3.49□□□□□ -1.85
GHDC-203ENST00000428494 KRTAP5-7Q6L8G8 165 aa3.35□□□□□ -1.87
GHDC-203ENST00000428494 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
GHDC-203ENST00000428494 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
GHDC-203ENST00000428494 KRTAP4-11Q9BYQ6 195 aa3.3□□□□□ -1.88
GHDC-203ENST00000428494 KRTAP5-1Q6L8H4 278 aa3.16□□□□□ -1.9
GHDC-203ENST00000428494 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
GHDC-203ENST00000428494 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
GHDC-203ENST00000428494 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
GHDC-203ENST00000428494 MUC5BQ9HC84 5762 aaPredicted RBP3.04□□□□□ -1.92
GHDC-203ENST00000428494 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
GHDC-203ENST00000428494 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
GHDC-203ENST00000428494 KRTAP21-2Q3LI59 83 aa2.96□□□□□ -1.94
GHDC-203ENST00000428494 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.85□□□□□ -1.95
GHDC-203ENST00000428494 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
GHDC-203ENST00000428494 KRTAP21-1Q3LI58 79 aa2.82□□□□□ -1.96
GHDC-203ENST00000428494 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
GHDC-203ENST00000428494 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
GHDC-203ENST00000428494 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
GHDC-203ENST00000428494 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
GHDC-203ENST00000428494 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms