RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 MUC12Q9UKN1 5478 aa4.58□□□□□ -1.68
LRCH3-203ENST00000425562 KRTAP4-3Q9BYR4 195 aa4.54□□□□□ -1.68
LRCH3-203ENST00000425562 MT1LQ93083 61 aa4.53□□□□□ -1.68
LRCH3-203ENST00000425562 MT1EP04732 61 aa4.52□□□□□ -1.69
LRCH3-203ENST00000425562 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
LRCH3-203ENST00000425562 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
LRCH3-203ENST00000425562 MT1GP13640 62 aa4.44□□□□□ -1.7
LRCH3-203ENST00000425562 LCE2DQ5TA82 110 aaPredicted RBP4.44□□□□□ -1.7
LRCH3-203ENST00000425562 MACF1Q9UPN3 7388 aaKnown RBP4.39□□□□□ -1.71
LRCH3-203ENST00000425562 KRTAP12-4P60329 112 aa4.38□□□□□ -1.71
LRCH3-203ENST00000425562 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
LRCH3-203ENST00000425562 KRTAP19-6Q3LI70 58 aa4.35□□□□□ -1.71
LRCH3-203ENST00000425562 KRTAP9-2Q9BYQ4 174 aa4.3□□□□□ -1.72
LRCH3-203ENST00000425562 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
LRCH3-203ENST00000425562 LCE3BQ5TA77 95 aa4.23□□□□□ -1.73
LRCH3-203ENST00000425562 MT1MQ8N339 61 aa4.23□□□□□ -1.73
LRCH3-203ENST00000425562 KRTAP19-3Q7Z4W3 81 aa4.2□□□□□ -1.74
LRCH3-203ENST00000425562 SPRR2FQ96RM1 72 aa4.17□□□□□ -1.74
LRCH3-203ENST00000425562 MDN1Q9NU22 5596 aa4.17□□□□□ -1.74
LRCH3-203ENST00000425562 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.74
LRCH3-203ENST00000425562 LCE5AQ5TCM9 118 aa4.03□□□□□ -1.76
LRCH3-203ENST00000425562 KRTAP9-7A8MTY7 169 aa4.01□□□□□ -1.77
LRCH3-203ENST00000425562 PRM1P04553 51 aa3.93□□□□□ -1.78
LRCH3-203ENST00000425562 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
LRCH3-203ENST00000425562 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
LRCH3-203ENST00000425562 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.8
LRCH3-203ENST00000425562 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
LRCH3-203ENST00000425562 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
LRCH3-203ENST00000425562 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.81□□□□□ -1.8
LRCH3-203ENST00000425562 SPRR2EP22531 72 aa3.8□□□□□ -1.8
LRCH3-203ENST00000425562 SPRR2BP35325 72 aa3.8□□□□□ -1.8
LRCH3-203ENST00000425562 SPRR2AP35326 72 aa3.8□□□□□ -1.8
LRCH3-203ENST00000425562 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
LRCH3-203ENST00000425562 KRTAP5-9P26371 169 aa3.75□□□□□ -1.81
LRCH3-203ENST00000425562 MT1AP04731 61 aa3.74□□□□□ -1.81
LRCH3-203ENST00000425562 KRTAP6-2Q3LI66 62 aa3.69□□□□□ -1.82
LRCH3-203ENST00000425562 SPRR2DP22532 72 aa3.63□□□□□ -1.83
LRCH3-203ENST00000425562 KRTAP6-3Q3LI67 103 aa3.61□□□□□ -1.83
LRCH3-203ENST00000425562 KRTAP9-4Q9BYQ2 154 aa3.53□□□□□ -1.84
LRCH3-203ENST00000425562 NEBP20929 6669 aa3.52□□□□□ -1.85
LRCH3-203ENST00000425562 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
LRCH3-203ENST00000425562 MT3P25713 68 aa3.36□□□□□ -1.87
LRCH3-203ENST00000425562 MT4P47944 62 aa3.32□□□□□ -1.88
LRCH3-203ENST00000425562 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
LRCH3-203ENST00000425562 HMCN1Q96RW7 5635 aa3.22□□□□□ -1.89
LRCH3-203ENST00000425562 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
LRCH3-203ENST00000425562 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
LRCH3-203ENST00000425562 LCE1DQ5T752 114 aa3.11□□□□□ -1.91
LRCH3-203ENST00000425562 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
LRCH3-203ENST00000425562 MUC5ACP98088 5654 aa3.06□□□□□ -1.92
LRCH3-203ENST00000425562 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
LRCH3-203ENST00000425562 KRTAP4-11Q9BYQ6 195 aa3.03□□□□□ -1.92
LRCH3-203ENST00000425562 LCE4AQ5TA78 99 aa3□□□□□ -1.93
LRCH3-203ENST00000425562 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
LRCH3-203ENST00000425562 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
LRCH3-203ENST00000425562 MUC19Q7Z5P9 8384 aa2.9□□□□□ -1.95
LRCH3-203ENST00000425562 KRTAP5-3Q6L8H2 238 aa2.88□□□□□ -1.95
LRCH3-203ENST00000425562 KRTAP4-12Q9BQ66 201 aa2.79□□□□□ -1.96
LRCH3-203ENST00000425562 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
LRCH3-203ENST00000425562 AHNAK2Q8IVF2 5795 aa2.64□□□□□ -1.99
LRCH3-203ENST00000425562 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
LRCH3-203ENST00000425562 KRTAP9-9Q9BYP9 154 aa2.61□□□□□ -1.99
LRCH3-203ENST00000425562 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
LRCH3-203ENST00000425562 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
LRCH3-203ENST00000425562 LCE1CQ5T751 118 aa2.53□□□□□ -2
LRCH3-203ENST00000425562 MUC5BQ9HC84 5762 aaPredicted RBP2.51□□□□□ -2.01
LRCH3-203ENST00000425562 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
LRCH3-203ENST00000425562 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.01
LRCH3-203ENST00000425562 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
LRCH3-203ENST00000425562 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
LRCH3-203ENST00000425562 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
LRCH3-203ENST00000425562 KRTAP21-1Q3LI58 79 aa2.31□□□□□ -2.04
LRCH3-203ENST00000425562 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.04
LRCH3-203ENST00000425562 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.07
LRCH3-203ENST00000425562 AHNAKQ09666 5890 aaKnown RBP1.96□□□□□ -2.1
LRCH3-203ENST00000425562 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
LRCH3-203ENST00000425562 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 212 ms