RNA–Protein interactions for RNA: ENST00000424248.2

DENND3-202, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene DENND3, Length 4,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-202ENST00000424248 FAT4Q6V0I7 4981 aa4.38□□□□□ -1.71
DENND3-202ENST00000424248 KRTAP2-3P0C7H8 128 aa4.36□□□□□ -1.71
DENND3-202ENST00000424248 KRTAP2-4Q9BYR9 128 aa4.36□□□□□ -1.71
DENND3-202ENST00000424248 KRTAP2-1Q9BYU5 128 aa4.36□□□□□ -1.71
DENND3-202ENST00000424248 UBR4Q5T4S7 5183 aa4.33□□□□□ -1.72
DENND3-202ENST00000424248 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
DENND3-202ENST00000424248 LCE2DQ5TA82 110 aaPredicted RBP4.31□□□□□ -1.72
DENND3-202ENST00000424248 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
DENND3-202ENST00000424248 HMCN2Q8NDA2 5059 aa4.28□□□□□ -1.72
DENND3-202ENST00000424248 MT3P25713 68 aa4.27□□□□□ -1.73
DENND3-202ENST00000424248 KRTAP9-2Q9BYQ4 174 aa4.24□□□□□ -1.73
DENND3-202ENST00000424248 PRM1P04553 51 aa4.19□□□□□ -1.74
DENND3-202ENST00000424248 LOC100996750A0A140TA64 210 aa4.18□□□□□ -1.74
DENND3-202ENST00000424248 KRTAP4-3Q9BYR4 195 aa4.17□□□□□ -1.74
DENND3-202ENST00000424248 MT1AP04731 61 aa4.13□□□□□ -1.75
DENND3-202ENST00000424248 FSIP2Q5CZC0 6907 aa4.11□□□□□ -1.75
DENND3-202ENST00000424248 KRTAP9-6A8MVA2 160 aa4.07□□□□□ -1.76
DENND3-202ENST00000424248 KRTAP9-6A0A140TA67 174 aa4.06□□□□□ -1.76
DENND3-202ENST00000424248 MT4P47944 62 aa4.04□□□□□ -1.76
DENND3-202ENST00000424248 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
DENND3-202ENST00000424248 MUC2Q02817 5179 aa4.03□□□□□ -1.76
DENND3-202ENST00000424248 LCE5AQ5TCM9 118 aa3.93□□□□□ -1.78
DENND3-202ENST00000424248 KRTAP6-3Q3LI67 103 aa3.9□□□□□ -1.79
DENND3-202ENST00000424248 KRTAP4-9Q9BYQ8 210 aa3.88□□□□□ -1.79
DENND3-202ENST00000424248 LCE1DQ5T752 114 aa3.88□□□□□ -1.79
DENND3-202ENST00000424248 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
DENND3-202ENST00000424248 LCE1BQ5T7P3 118 aa3.86□□□□□ -1.79
DENND3-202ENST00000424248 KRTAP6-1Q3LI64 71 aa3.82□□□□□ -1.8
DENND3-202ENST00000424248 KRTAP9-7A8MTY7 169 aa3.82□□□□□ -1.8
DENND3-202ENST00000424248 KRTAP9-4Q9BYQ2 154 aa3.78□□□□□ -1.8
DENND3-202ENST00000424248 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
DENND3-202ENST00000424248 KRTAP20-1Q3LI63 56 aa3.74□□□□□ -1.81
DENND3-202ENST00000424248 LCE4AQ5TA78 99 aa3.73□□□□□ -1.81
DENND3-202ENST00000424248 SYNE2Q8WXH0 6885 aaKnown RBP3.73□□□□□ -1.81
DENND3-202ENST00000424248 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.72□□□□□ -1.81
DENND3-202ENST00000424248 USH2AO75445 5202 aa3.69□□□□□ -1.82
DENND3-202ENST00000424248 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
DENND3-202ENST00000424248 FCGBPQ9Y6R7 5405 aaPredicted RBP3.6□□□□□ -1.83
DENND3-202ENST00000424248 KRTAP5-9P26371 169 aa3.47□□□□□ -1.85
DENND3-202ENST00000424248 DSTQ03001 7570 aaKnown RBP3.47□□□□□ -1.85
DENND3-202ENST00000424248 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
DENND3-202ENST00000424248 KMT2DO14686 5537 aa3.37□□□□□ -1.87
DENND3-202ENST00000424248 SSPOA2VEC9 5147 aa3.34□□□□□ -1.88
DENND3-202ENST00000424248 GPR98Q8WXG9 6306 aa3.32□□□□□ -1.88
DENND3-202ENST00000424248 MUC12Q9UKN1 5478 aa3.26□□□□□ -1.89
DENND3-202ENST00000424248 NEBP20929 6669 aa3.22□□□□□ -1.89
DENND3-202ENST00000424248 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
DENND3-202ENST00000424248 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
DENND3-202ENST00000424248 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
DENND3-202ENST00000424248 KRTAP20-2Q3LI61 65 aa3.17□□□□□ -1.9
DENND3-202ENST00000424248 MDN1Q9NU22 5596 aa3.16□□□□□ -1.9
DENND3-202ENST00000424248 KRTAP4-6Q9BYQ5 205 aa3.14□□□□□ -1.91
DENND3-202ENST00000424248 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
DENND3-202ENST00000424248 KRTAP9-9Q9BYP9 154 aa3.1□□□□□ -1.91
DENND3-202ENST00000424248 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
DENND3-202ENST00000424248 KRTAP4-11Q9BYQ6 195 aa3.04□□□□□ -1.92
DENND3-202ENST00000424248 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
DENND3-202ENST00000424248 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
DENND3-202ENST00000424248 KRTAP4-12Q9BQ66 201 aa2.63□□□□□ -1.99
DENND3-202ENST00000424248 KRTAP4-2Q9BYR5 136 aa2.63□□□□□ -1.99
DENND3-202ENST00000424248 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
DENND3-202ENST00000424248 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
DENND3-202ENST00000424248 HMCN1Q96RW7 5635 aa2.53□□□□□ -2.01
DENND3-202ENST00000424248 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
DENND3-202ENST00000424248 KRTAP5-2Q701N4 177 aa2.47□□□□□ -2.01
DENND3-202ENST00000424248 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
DENND3-202ENST00000424248 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
DENND3-202ENST00000424248 KRTAP5-11Q6L8G4 156 aa2.18□□□□□ -2.06
DENND3-202ENST00000424248 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
DENND3-202ENST00000424248 KRTAP5-1Q6L8H4 278 aa2.12□□□□□ -2.07
DENND3-202ENST00000424248 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
DENND3-202ENST00000424248 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
DENND3-202ENST00000424248 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
DENND3-202ENST00000424248 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
DENND3-202ENST00000424248 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
DENND3-202ENST00000424248 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
DENND3-202ENST00000424248 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 88.3 ms