RNA–Protein interactions for RNA: ENST00000422447.7

LDHA-205, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 2,416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-205ENST00000422447 KRTAP4-7Q9BYR0 210 aa4.47□□□□□ -1.69
LDHA-205ENST00000422447 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.45□□□□□ -1.7
LDHA-205ENST00000422447 LCE3BQ5TA77 95 aa4.45□□□□□ -1.7
LDHA-205ENST00000422447 MT1LQ93083 61 aa4.45□□□□□ -1.7
LDHA-205ENST00000422447 SYNE2Q8WXH0 6885 aaKnown RBP4.43□□□□□ -1.7
LDHA-205ENST00000422447 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
LDHA-205ENST00000422447 MUC12Q9UKN1 5478 aa4.42□□□□□ -1.7
LDHA-205ENST00000422447 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.72
LDHA-205ENST00000422447 SPRR2FQ96RM1 72 aa4.29□□□□□ -1.72
LDHA-205ENST00000422447 KRTAP9-9Q9BYP9 154 aa4.25□□□□□ -1.73
LDHA-205ENST00000422447 KRTAP9-4Q9BYQ2 154 aa4.25□□□□□ -1.73
LDHA-205ENST00000422447 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
LDHA-205ENST00000422447 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
LDHA-205ENST00000422447 MDN1Q9NU22 5596 aa4.23□□□□□ -1.73
LDHA-205ENST00000422447 LCE1DQ5T752 114 aa4.22□□□□□ -1.73
LDHA-205ENST00000422447 GPR98Q8WXG9 6306 aa4.21□□□□□ -1.74
LDHA-205ENST00000422447 MT1MQ8N339 61 aa4.21□□□□□ -1.74
LDHA-205ENST00000422447 KRTAP4-12Q9BQ66 201 aa4.21□□□□□ -1.74
LDHA-205ENST00000422447 MT1GP13640 62 aa4.2□□□□□ -1.74
LDHA-205ENST00000422447 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
LDHA-205ENST00000422447 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
LDHA-205ENST00000422447 DSTQ03001 7570 aaKnown RBP4.16□□□□□ -1.74
LDHA-205ENST00000422447 KRTAP4-9Q9BYQ8 210 aa4.16□□□□□ -1.74
LDHA-205ENST00000422447 KRTAP2-3P0C7H8 128 aa4.15□□□□□ -1.75
LDHA-205ENST00000422447 KRTAP2-4Q9BYR9 128 aa4.15□□□□□ -1.75
LDHA-205ENST00000422447 KRTAP2-1Q9BYU5 128 aa4.15□□□□□ -1.75
LDHA-205ENST00000422447 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
LDHA-205ENST00000422447 KRTAP4-2Q9BYR5 136 aa4.09□□□□□ -1.75
LDHA-205ENST00000422447 LCE1AQ5T7P2 110 aa4.08□□□□□ -1.76
LDHA-205ENST00000422447 INE1O15225 51 aa4.06□□□□□ -1.76
LDHA-205ENST00000422447 KRTAP6-3Q3LI67 103 aa4.06□□□□□ -1.76
LDHA-205ENST00000422447 SPRR2EP22531 72 aa4.04□□□□□ -1.76
LDHA-205ENST00000422447 SPRR2BP35325 72 aa4.04□□□□□ -1.76
LDHA-205ENST00000422447 SPRR2AP35326 72 aa4.04□□□□□ -1.76
LDHA-205ENST00000422447 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.77
LDHA-205ENST00000422447 SPRR2DP22532 72 aa3.89□□□□□ -1.79
LDHA-205ENST00000422447 NEBP20929 6669 aa3.88□□□□□ -1.79
LDHA-205ENST00000422447 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
LDHA-205ENST00000422447 KRTAP6-1Q3LI64 71 aa3.78□□□□□ -1.8
LDHA-205ENST00000422447 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
LDHA-205ENST00000422447 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
LDHA-205ENST00000422447 MT1AP04731 61 aa3.74□□□□□ -1.81
LDHA-205ENST00000422447 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
LDHA-205ENST00000422447 HMCN1Q96RW7 5635 aa3.51□□□□□ -1.85
LDHA-205ENST00000422447 KRTAP20-1Q3LI63 56 aa3.49□□□□□ -1.85
LDHA-205ENST00000422447 KRTAP5-4Q6L8H1 288 aa3.49□□□□□ -1.85
LDHA-205ENST00000422447 LCE3DQ9BYE3 92 aa3.49□□□□□ -1.85
LDHA-205ENST00000422447 KRTAP2-2Q9BYT5 123 aa3.46□□□□□ -1.85
LDHA-205ENST00000422447 MUC5BQ9HC84 5762 aaPredicted RBP3.45□□□□□ -1.86
LDHA-205ENST00000422447 MT4P47944 62 aa3.43□□□□□ -1.86
LDHA-205ENST00000422447 KRTAP6-2Q3LI66 62 aa3.43□□□□□ -1.86
LDHA-205ENST00000422447 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
LDHA-205ENST00000422447 AHNAKQ09666 5890 aaKnown RBP3.42□□□□□ -1.86
LDHA-205ENST00000422447 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
LDHA-205ENST00000422447 MT3P25713 68 aa3.37□□□□□ -1.87
LDHA-205ENST00000422447 LCE4AQ5TA78 99 aa3.36□□□□□ -1.87
LDHA-205ENST00000422447 KRTAP20-2Q3LI61 65 aa3.29□□□□□ -1.88
LDHA-205ENST00000422447 KRTAP5-2Q701N4 177 aa3.17□□□□□ -1.9
LDHA-205ENST00000422447 PRM1P04553 51 aa3.17□□□□□ -1.9
LDHA-205ENST00000422447 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
LDHA-205ENST00000422447 AHNAK2Q8IVF2 5795 aa2.93□□□□□ -1.94
LDHA-205ENST00000422447 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
LDHA-205ENST00000422447 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
LDHA-205ENST00000422447 KRTAP4-4Q9BYR3 166 aa2.81□□□□□ -1.96
LDHA-205ENST00000422447 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.97
LDHA-205ENST00000422447 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
LDHA-205ENST00000422447 KRTAP5-8O75690 187 aa2.74□□□□□ -1.97
LDHA-205ENST00000422447 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
LDHA-205ENST00000422447 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
LDHA-205ENST00000422447 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
LDHA-205ENST00000422447 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
LDHA-205ENST00000422447 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
LDHA-205ENST00000422447 LCE1FQ5T754 118 aa2.38□□□□□ -2.03
LDHA-205ENST00000422447 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
LDHA-205ENST00000422447 PHGR1C9JFL3 82 aa2□□□□□ -2.09
LDHA-205ENST00000422447 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
LDHA-205ENST00000422447 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 70.6 ms