RNA–Protein interactions for RNA: ENST00000422006.5

SSB-205, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 2,463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-205ENST00000422006 FSIP2Q5CZC0 6907 aa3.6□□□□□ -1.83
SSB-205ENST00000422006 USH2AO75445 5202 aa3.56□□□□□ -1.84
SSB-205ENST00000422006 KRTAP10-10P60014 251 aa3.54□□□□□ -1.84
SSB-205ENST00000422006 KRTAP5-3Q6L8H2 238 aa3.54□□□□□ -1.84
SSB-205ENST00000422006 NEBP20929 6669 aa3.54□□□□□ -1.84
SSB-205ENST00000422006 FCGBPQ9Y6R7 5405 aaPredicted RBP3.54□□□□□ -1.84
SSB-205ENST00000422006 KRTAP2-3P0C7H8 128 aa3.5□□□□□ -1.85
SSB-205ENST00000422006 KRTAP2-4Q9BYR9 128 aa3.5□□□□□ -1.85
SSB-205ENST00000422006 FLGP20930 4061 aaPredicted RBP3.47□□□□□ -1.85
SSB-205ENST00000422006 MT2AP02795 61 aa3.43□□□□□ -1.86
SSB-205ENST00000422006 KRTAP10-12P60413 245 aa3.41□□□□□ -1.86
SSB-205ENST00000422006 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
SSB-205ENST00000422006 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
SSB-205ENST00000422006 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
SSB-205ENST00000422006 MT1FP04733 61 aa3.35□□□□□ -1.87
SSB-205ENST00000422006 KRTAP2-1Q9BYU5 128 aa3.35□□□□□ -1.87
SSB-205ENST00000422006 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.88
SSB-205ENST00000422006 SYNE2Q8WXH0 6885 aaKnown RBP3.33□□□□□ -1.88
SSB-205ENST00000422006 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
SSB-205ENST00000422006 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
SSB-205ENST00000422006 GPR98Q8WXG9 6306 aa3.23□□□□□ -1.89
SSB-205ENST00000422006 KRTAP12-3P60328 96 aa3.18□□□□□ -1.9
SSB-205ENST00000422006 KRTAP10-5P60370 271 aa3.18□□□□□ -1.9
SSB-205ENST00000422006 SPRR2EP22531 72 aa3.12□□□□□ -1.91
SSB-205ENST00000422006 SPRR2BP35325 72 aa3.12□□□□□ -1.91
SSB-205ENST00000422006 SPRR2AP35326 72 aa3.12□□□□□ -1.91
SSB-205ENST00000422006 HMCN1Q96RW7 5635 aa3.08□□□□□ -1.92
SSB-205ENST00000422006 KRTAP19-8Q3LI54 63 aa3.07□□□□□ -1.92
SSB-205ENST00000422006 MUC12Q9UKN1 5478 aa3.06□□□□□ -1.92
SSB-205ENST00000422006 SPRR2DP22532 72 aa3.06□□□□□ -1.92
SSB-205ENST00000422006 MDN1Q9NU22 5596 aa3.05□□□□□ -1.92
SSB-205ENST00000422006 KMT2DO14686 5537 aa3.04□□□□□ -1.92
SSB-205ENST00000422006 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.92
SSB-205ENST00000422006 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
SSB-205ENST00000422006 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
SSB-205ENST00000422006 SPRR2FQ96RM1 72 aa3.01□□□□□ -1.93
SSB-205ENST00000422006 SPRR2GQ9BYE4 73 aa3□□□□□ -1.93
SSB-205ENST00000422006 MT1BP07438 61 aa2.99□□□□□ -1.93
SSB-205ENST00000422006 KRTAP12-4P60329 112 aa2.94□□□□□ -1.94
SSB-205ENST00000422006 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
SSB-205ENST00000422006 KRTAP19-5Q3LI72 72 aa2.87□□□□□ -1.95
SSB-205ENST00000422006 KRTAP5-10Q6L8G5 202 aa2.85□□□□□ -1.95
SSB-205ENST00000422006 MT1XP80297 61 aa2.85□□□□□ -1.95
SSB-205ENST00000422006 AHNAK2Q8IVF2 5795 aa2.79□□□□□ -1.96
SSB-205ENST00000422006 PRM1P04553 51 aa2.69□□□□□ -1.98
SSB-205ENST00000422006 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
SSB-205ENST00000422006 KRTAP5-4Q6L8H1 288 aa2.62□□□□□ -1.99
SSB-205ENST00000422006 KRTAP5-11Q6L8G4 156 aa2.62□□□□□ -1.99
SSB-205ENST00000422006 MUC5BQ9HC84 5762 aaPredicted RBP2.61□□□□□ -1.99
SSB-205ENST00000422006 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
SSB-205ENST00000422006 KRTAP19-3Q7Z4W3 81 aa2.57□□□□□ -2
SSB-205ENST00000422006 MT4P47944 62 aa2.56□□□□□ -2
SSB-205ENST00000422006 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
SSB-205ENST00000422006 KRTAP19-7Q3SYF9 63 aa2.53□□□□□ -2
SSB-205ENST00000422006 MT1GP13640 62 aa2.52□□□□□ -2.01
SSB-205ENST00000422006 MT1LQ93083 61 aa2.51□□□□□ -2.01
SSB-205ENST00000422006 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
SSB-205ENST00000422006 MT1AP04731 61 aa2.47□□□□□ -2.01
SSB-205ENST00000422006 MT1EP04732 61 aa2.47□□□□□ -2.01
SSB-205ENST00000422006 KRTAP20-2Q3LI61 65 aa2.43□□□□□ -2.02
SSB-205ENST00000422006 DSTQ03001 7570 aaKnown RBP2.4□□□□□ -2.03
SSB-205ENST00000422006 MUC5ACP98088 5654 aa2.4□□□□□ -2.03
SSB-205ENST00000422006 KRTAP6-2Q3LI66 62 aa2.4□□□□□ -2.03
SSB-205ENST00000422006 MT1MQ8N339 61 aa2.36□□□□□ -2.03
SSB-205ENST00000422006 KRTAP4-3Q9BYR4 195 aa2.34□□□□□ -2.03
SSB-205ENST00000422006 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
SSB-205ENST00000422006 KRTAP5-2Q701N4 177 aa2.22□□□□□ -2.05
SSB-205ENST00000422006 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
SSB-205ENST00000422006 KRTAP5-1Q6L8H4 278 aa2.16□□□□□ -2.06
SSB-205ENST00000422006 KRTAP6-1Q3LI64 71 aa2.15□□□□□ -2.07
SSB-205ENST00000422006 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
SSB-205ENST00000422006 LCE1CQ5T751 118 aa2.01□□□□□ -2.09
SSB-205ENST00000422006 LCE1BQ5T7P3 118 aa2.01□□□□□ -2.09
SSB-205ENST00000422006 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
SSB-205ENST00000422006 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
SSB-205ENST00000422006 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
SSB-205ENST00000422006 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
SSB-205ENST00000422006 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 66.7 ms