RNA–Protein interactions for RNA: ENST00000421832.2

CTU1-201, Transcript of cytosolic thiouridylase subunit 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTU1, Length 2,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU1-201ENST00000421832 SPRR2FQ96RM1 72 aa8.85□□□□□ -0.99
CTU1-201ENST00000421832 MT1EP04732 61 aa8.85□□□□□ -0.99
CTU1-201ENST00000421832 KRTAP5-9P26371 169 aa8.79□□□□□ -1
CTU1-201ENST00000421832 KRTAP6-3Q3LI67 103 aa8.73□□□□□ -1.01
CTU1-201ENST00000421832 KRTAP9-7A8MTY7 169 aa8.71□□□□□ -1.02
CTU1-201ENST00000421832 MDN1Q9NU22 5596 aa8.66□□□□□ -1.02
CTU1-201ENST00000421832 MT1LQ93083 61 aa8.63□□□□□ -1.03
CTU1-201ENST00000421832 LCE3CQ5T5A8 94 aa8.61□□□□□ -1.03
CTU1-201ENST00000421832 KRTAP19-3Q7Z4W3 81 aa8.53□□□□□ -1.04
CTU1-201ENST00000421832 LCE1AQ5T7P2 110 aa8.5□□□□□ -1.05
CTU1-201ENST00000421832 SPRR2EP22531 72 aa8.44□□□□□ -1.06
CTU1-201ENST00000421832 SPRR2BP35325 72 aa8.44□□□□□ -1.06
CTU1-201ENST00000421832 SPRR2AP35326 72 aa8.44□□□□□ -1.06
CTU1-201ENST00000421832 LCE5AQ5TCM9 118 aa8.42□□□□□ -1.06
CTU1-201ENST00000421832 KRTAP4-7Q9BYR0 210 aa8.42□□□□□ -1.06
CTU1-201ENST00000421832 MT1GP13640 62 aa8.41□□□□□ -1.06
CTU1-201ENST00000421832 KRTAP2-3P0C7H8 128 aa8.39□□□□□ -1.07
CTU1-201ENST00000421832 KRTAP2-4Q9BYR9 128 aa8.39□□□□□ -1.07
CTU1-201ENST00000421832 KRTAP2-1Q9BYU5 128 aa8.39□□□□□ -1.07
CTU1-201ENST00000421832 MT1MQ8N339 61 aa8.35□□□□□ -1.07
CTU1-201ENST00000421832 KRTAP19-4Q3LI73 84 aa8.3□□□□□ -1.08
CTU1-201ENST00000421832 KRTAP4-3Q9BYR4 195 aa8.26□□□□□ -1.09
CTU1-201ENST00000421832 KRTAP9-6A8MVA2 160 aa8.25□□□□□ -1.09
CTU1-201ENST00000421832 NEBP20929 6669 aa8.21□□□□□ -1.1
CTU1-201ENST00000421832 DSTQ03001 7570 aaKnown RBP8.15□□□□□ -1.11
CTU1-201ENST00000421832 SPRR2DP22532 72 aa8.13□□□□□ -1.11
CTU1-201ENST00000421832 LOC100996750A0A140TA64 210 aa7.91□□□□□ -1.14
CTU1-201ENST00000421832 LCE3BQ5TA77 95 aa7.83□□□□□ -1.16
CTU1-201ENST00000421832 KRTAP20-1Q3LI63 56 aa7.66□□□□□ -1.18
CTU1-201ENST00000421832 KRTAP5-5Q701N2 237 aaPredicted RBP7.55□□□□□ -1.2
CTU1-201ENST00000421832 KRTAP2-2Q9BYT5 123 aa7.48□□□□□ -1.21
CTU1-201ENST00000421832 KRTAP12-4P60329 112 aa7.46□□□□□ -1.22
CTU1-201ENST00000421832 MT1AP04731 61 aa7.31□□□□□ -1.24
CTU1-201ENST00000421832 KRTAP6-1Q3LI64 71 aa7.31□□□□□ -1.24
CTU1-201ENST00000421832 KRTAP5-4Q6L8H1 288 aa7.3□□□□□ -1.24
CTU1-201ENST00000421832 SYNE1Q8NF91 8797 aaKnown RBP7.25□□□□□ -1.25
CTU1-201ENST00000421832 LCE4AQ5TA78 99 aa7.16□□□□□ -1.26
CTU1-201ENST00000421832 KRTAP4-9Q9BYQ8 210 aa7.13□□□□□ -1.27
CTU1-201ENST00000421832 MT4P47944 62 aa7.11□□□□□ -1.27
CTU1-201ENST00000421832 KRTAP4-6Q9BYQ5 205 aa7.05□□□□□ -1.28
CTU1-201ENST00000421832 LCE1DQ5T752 114 aa7.02□□□□□ -1.29
CTU1-201ENST00000421832 HMCN1Q96RW7 5635 aa6.99□□□□□ -1.29
CTU1-201ENST00000421832 KRTAP9-4Q9BYQ2 154 aa6.97□□□□□ -1.29
CTU1-201ENST00000421832 KRTAP20-2Q3LI61 65 aa6.86□□□□□ -1.31
CTU1-201ENST00000421832 KRTAP6-2Q3LI66 62 aa6.76□□□□□ -1.33
CTU1-201ENST00000421832 LCE3EQ5T5B0 92 aa6.74□□□□□ -1.33
CTU1-201ENST00000421832 LCE3DQ9BYE3 92 aa6.73□□□□□ -1.33
CTU1-201ENST00000421832 PRM1P04553 51 aa6.66□□□□□ -1.34
CTU1-201ENST00000421832 KRTAP5-3Q6L8H2 238 aa6.62□□□□□ -1.35
CTU1-201ENST00000421832 MT3P25713 68 aa6.61□□□□□ -1.35
CTU1-201ENST00000421832 KRTAP5-2Q701N4 177 aa6.59□□□□□ -1.35
CTU1-201ENST00000421832 OBSCNQ5VST9 7968 aa6.35□□□□□ -1.39
CTU1-201ENST00000421832 GPR98Q8WXG9 6306 aa6.3□□□□□ -1.4
CTU1-201ENST00000421832 AHNAK2Q8IVF2 5795 aa6.28□□□□□ -1.4
CTU1-201ENST00000421832 KRTAP5-10Q6L8G5 202 aa5.99□□□□□ -1.45
CTU1-201ENST00000421832 KRTAP4-11Q9BYQ6 195 aa5.99□□□□□ -1.45
CTU1-201ENST00000421832 KRTAP5-8O75690 187 aa5.79□□□□□ -1.48
CTU1-201ENST00000421832 KRTAP5-7Q6L8G8 165 aa5.79□□□□□ -1.48
CTU1-201ENST00000421832 LCE1EQ5T753 118 aa5.78□□□□□ -1.48
CTU1-201ENST00000421832 KRTAP5-1Q6L8H4 278 aa5.75□□□□□ -1.49
CTU1-201ENST00000421832 MUC5ACP98088 5654 aa5.6□□□□□ -1.51
CTU1-201ENST00000421832 LCE1BQ5T7P3 118 aa5.5□□□□□ -1.53
CTU1-201ENST00000421832 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
CTU1-201ENST00000421832 LCE1CQ5T751 118 aa5.4□□□□□ -1.54
CTU1-201ENST00000421832 KRTAP9-9Q9BYP9 154 aa5.21□□□□□ -1.58
CTU1-201ENST00000421832 MUC5BQ9HC84 5762 aaPredicted RBP5.08□□□□□ -1.6
CTU1-201ENST00000421832 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.03□□□□□ -1.6
CTU1-201ENST00000421832 AHNAKQ09666 5890 aaKnown RBP4.94□□□□□ -1.62
CTU1-201ENST00000421832 KRTAP21-2Q3LI59 83 aa4.79□□□□□ -1.64
CTU1-201ENST00000421832 KRTAP5-11Q6L8G4 156 aa4.79□□□□□ -1.64
CTU1-201ENST00000421832 KRTAP4-12Q9BQ66 201 aa4.66□□□□□ -1.66
CTU1-201ENST00000421832 KRTAP21-1Q3LI58 79 aa4.38□□□□□ -1.71
CTU1-201ENST00000421832 KRTAP4-4Q9BYR3 166 aa4.33□□□□□ -1.72
CTU1-201ENST00000421832 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
CTU1-201ENST00000421832 PHGR1C9JFL3 82 aa4.12□□□□□ -1.75
CTU1-201ENST00000421832 MUC19Q7Z5P9 8384 aa3.82□□□□□ -1.8
CTU1-201ENST00000421832 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 61 ms