RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 LCE1AQ5T7P2 110 aa7.68□□□□□ -1.18
ABCF3-202ENST00000421340 KRTAP19-3Q7Z4W3 81 aa7.67□□□□□ -1.18
ABCF3-202ENST00000421340 MUC12Q9UKN1 5478 aa7.64□□□□□ -1.19
ABCF3-202ENST00000421340 SPRR2EP22531 72 aa7.64□□□□□ -1.19
ABCF3-202ENST00000421340 SPRR2BP35325 72 aa7.64□□□□□ -1.19
ABCF3-202ENST00000421340 SPRR2AP35326 72 aa7.64□□□□□ -1.19
ABCF3-202ENST00000421340 MT1GP13640 62 aa7.62□□□□□ -1.19
ABCF3-202ENST00000421340 LCE5AQ5TCM9 118 aa7.6□□□□□ -1.19
ABCF3-202ENST00000421340 SVIPQ8NHG7 77 aa7.59□□□□□ -1.19
ABCF3-202ENST00000421340 MDN1Q9NU22 5596 aa7.55□□□□□ -1.2
ABCF3-202ENST00000421340 NEBP20929 6669 aa7.48□□□□□ -1.21
ABCF3-202ENST00000421340 MT1MQ8N339 61 aa7.46□□□□□ -1.22
ABCF3-202ENST00000421340 LCE3CQ5T5A8 94 aa7.43□□□□□ -1.22
ABCF3-202ENST00000421340 SPRR2DP22532 72 aa7.38□□□□□ -1.23
ABCF3-202ENST00000421340 KRTAP4-7Q9BYR0 210 aa7.31□□□□□ -1.24
ABCF3-202ENST00000421340 KRTAP4-3Q9BYR4 195 aa7.21□□□□□ -1.26
ABCF3-202ENST00000421340 KRTAP2-3P0C7H8 128 aa7.13□□□□□ -1.27
ABCF3-202ENST00000421340 KRTAP2-4Q9BYR9 128 aa7.13□□□□□ -1.27
ABCF3-202ENST00000421340 LCE3BQ5TA77 95 aa7.12□□□□□ -1.27
ABCF3-202ENST00000421340 SPRR5A0A1B0GTR4 108 aa7.1□□□□□ -1.27
ABCF3-202ENST00000421340 KRTAP20-1Q3LI63 56 aa7.05□□□□□ -1.28
ABCF3-202ENST00000421340 DSTQ03001 7570 aaKnown RBP7□□□□□ -1.29
ABCF3-202ENST00000421340 KRTAP9-6A8MVA2 160 aa6.95□□□□□ -1.3
ABCF3-202ENST00000421340 KRTAP2-2Q9BYT5 123 aa6.95□□□□□ -1.3
ABCF3-202ENST00000421340 KRTAP2-1Q9BYU5 128 aa6.95□□□□□ -1.3
ABCF3-202ENST00000421340 LOC100996750A0A140TA64 210 aa6.89□□□□□ -1.31
ABCF3-202ENST00000421340 KRTAP5-5Q701N2 237 aaPredicted RBP6.78□□□□□ -1.32
ABCF3-202ENST00000421340 LUZP6Q538Z0 58 aa6.66□□□□□ -1.34
ABCF3-202ENST00000421340 KRTAP5-4Q6L8H1 288 aa6.66□□□□□ -1.34
ABCF3-202ENST00000421340 LCE4AQ5TA78 99 aa6.63□□□□□ -1.35
ABCF3-202ENST00000421340 MT1AP04731 61 aa6.57□□□□□ -1.36
ABCF3-202ENST00000421340 KRTAP6-1Q3LI64 71 aa6.45□□□□□ -1.38
ABCF3-202ENST00000421340 KRTAP12-4P60329 112 aa6.4□□□□□ -1.38
ABCF3-202ENST00000421340 KRTAP4-9Q9BYQ8 210 aa6.37□□□□□ -1.39
ABCF3-202ENST00000421340 MT4P47944 62 aa6.36□□□□□ -1.39
ABCF3-202ENST00000421340 LCE1DQ5T752 114 aa6.35□□□□□ -1.39
ABCF3-202ENST00000421340 SYNE1Q8NF91 8797 aaKnown RBP6.32□□□□□ -1.4
ABCF3-202ENST00000421340 KRTAP4-6Q9BYQ5 205 aa6.3□□□□□ -1.4
ABCF3-202ENST00000421340 KRTAP9-4Q9BYQ2 154 aa6.28□□□□□ -1.4
ABCF3-202ENST00000421340 KRTAP20-2Q3LI61 65 aa6.2□□□□□ -1.42
ABCF3-202ENST00000421340 NDUFAF8A1L188 74 aa6.19□□□□□ -1.42
ABCF3-202ENST00000421340 HMCN1Q96RW7 5635 aa6.17□□□□□ -1.42
ABCF3-202ENST00000421340 KRTAP6-2Q3LI66 62 aa6.01□□□□□ -1.45
ABCF3-202ENST00000421340 KRTAP5-3Q6L8H2 238 aa6.01□□□□□ -1.45
ABCF3-202ENST00000421340 MT3P25713 68 aa5.99□□□□□ -1.45
ABCF3-202ENST00000421340 KRTAP5-2Q701N4 177 aa5.98□□□□□ -1.45
ABCF3-202ENST00000421340 AHNAK2Q8IVF2 5795 aa5.61□□□□□ -1.51
ABCF3-202ENST00000421340 LCE3DQ9BYE3 92 aa5.52□□□□□ -1.53
ABCF3-202ENST00000421340 KRTAP5-10Q6L8G5 202 aa5.49□□□□□ -1.53
ABCF3-202ENST00000421340 KRTAP4-11Q9BYQ6 195 aa5.46□□□□□ -1.54
ABCF3-202ENST00000421340 A0A0A0MQY5 61 aa5.41□□□□□ -1.54
ABCF3-202ENST00000421340 GPR98Q8WXG9 6306 aa5.34□□□□□ -1.55
ABCF3-202ENST00000421340 LCE3EQ5T5B0 92 aa5.34□□□□□ -1.55
ABCF3-202ENST00000421340 OBSCNQ5VST9 7968 aa5.34□□□□□ -1.55
ABCF3-202ENST00000421340 LCE1EQ5T753 118 aa5.33□□□□□ -1.56
ABCF3-202ENST00000421340 KRTAP5-8O75690 187 aa5.26□□□□□ -1.57
ABCF3-202ENST00000421340 INE1O15225 51 aa5.21□□□□□ -1.58
ABCF3-202ENST00000421340 KRTAP5-1Q6L8H4 278 aa5.2□□□□□ -1.58
ABCF3-202ENST00000421340 KRTAP5-7Q6L8G8 165 aa5.18□□□□□ -1.58
ABCF3-202ENST00000421340 MUC5ACP98088 5654 aa4.96□□□□□ -1.62
ABCF3-202ENST00000421340 LCE1CQ5T751 118 aa4.94□□□□□ -1.62
ABCF3-202ENST00000421340 LCE1BQ5T7P3 118 aa4.94□□□□□ -1.62
ABCF3-202ENST00000421340 KRTAP4-2Q9BYR5 136 aa4.91□□□□□ -1.62
ABCF3-202ENST00000421340 KRTAP9-9Q9BYP9 154 aa4.84□□□□□ -1.63
ABCF3-202ENST00000421340 H3BS24 57 aa4.76□□□□□ -1.65
ABCF3-202ENST00000421340 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.6□□□□□ -1.67
ABCF3-202ENST00000421340 MUC5BQ9HC84 5762 aaPredicted RBP4.53□□□□□ -1.68
ABCF3-202ENST00000421340 PRM1P04553 51 aa4.44□□□□□ -1.7
ABCF3-202ENST00000421340 AHNAKQ09666 5890 aaKnown RBP4.4□□□□□ -1.71
ABCF3-202ENST00000421340 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
ABCF3-202ENST00000421340 KRTAP21-2Q3LI59 83 aa4.27□□□□□ -1.73
ABCF3-202ENST00000421340 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
ABCF3-202ENST00000421340 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
ABCF3-202ENST00000421340 PHGR1C9JFL3 82 aa3.75□□□□□ -1.81
ABCF3-202ENST00000421340 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
ABCF3-202ENST00000421340 MUC19Q7Z5P9 8384 aa3.2□□□□□ -1.9
ABCF3-202ENST00000421340 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
ABCF3-202ENST00000421340 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 52.6 ms