RNA–Protein interactions for RNA: ENST00000420415.5

TFRC-203, Transcript of transferrin receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TFRC, Length 4,814 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-203ENST00000420415 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
TFRC-203ENST00000420415 NDUFAF8A1L188 74 aa2.99□□□□□ -1.93
TFRC-203ENST00000420415 MUC2Q02817 5179 aa2.98□□□□□ -1.93
TFRC-203ENST00000420415 KRTAP23-1A1A580 65 aa2.97□□□□□ -1.93
TFRC-203ENST00000420415 SSPOA2VEC9 5147 aa2.96□□□□□ -1.94
TFRC-203ENST00000420415 USH2AO75445 5202 aa2.96□□□□□ -1.94
TFRC-203ENST00000420415 KRTAP19-5Q3LI72 72 aa2.94□□□□□ -1.94
TFRC-203ENST00000420415 KRTAP19-3Q7Z4W3 81 aa2.93□□□□□ -1.94
TFRC-203ENST00000420415 KRTAP4-8A0A0G2JLE6 195 aa2.93□□□□□ -1.94
TFRC-203ENST00000420415 KRTAP4-8Q9BYQ9 185 aa2.93□□□□□ -1.94
TFRC-203ENST00000420415 KRTAP12-4P60329 112 aa2.93□□□□□ -1.94
TFRC-203ENST00000420415 KRTAP5-9P26371 169 aa2.91□□□□□ -1.94
TFRC-203ENST00000420415 FCGBPQ9Y6R7 5405 aaPredicted RBP2.87□□□□□ -1.95
TFRC-203ENST00000420415 NEBP20929 6669 aa2.85□□□□□ -1.95
TFRC-203ENST00000420415 MT1EP04732 61 aa2.82□□□□□ -1.96
TFRC-203ENST00000420415 LCE4AQ5TA78 99 aa2.82□□□□□ -1.96
TFRC-203ENST00000420415 MACF1Q9UPN3 7388 aaKnown RBP2.8□□□□□ -1.96
TFRC-203ENST00000420415 MT4P47944 62 aa2.8□□□□□ -1.96
TFRC-203ENST00000420415 MT1MQ8N339 61 aa2.73□□□□□ -1.97
TFRC-203ENST00000420415 MT1LQ93083 61 aa2.73□□□□□ -1.97
TFRC-203ENST00000420415 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
TFRC-203ENST00000420415 LCE3CQ5T5A8 94 aa2.68□□□□□ -1.98
TFRC-203ENST00000420415 LCE5AQ5TCM9 118 aa2.67□□□□□ -1.98
TFRC-203ENST00000420415 KRTAP4-9Q9BYQ8 210 aa2.66□□□□□ -1.98
TFRC-203ENST00000420415 KRTAP19-7Q3SYF9 63 aa2.65□□□□□ -1.98
TFRC-203ENST00000420415 KMT2DO14686 5537 aa2.65□□□□□ -1.99
TFRC-203ENST00000420415 GPR98Q8WXG9 6306 aa2.64□□□□□ -1.99
TFRC-203ENST00000420415 MDN1Q9NU22 5596 aa2.54□□□□□ -2
TFRC-203ENST00000420415 LCE1DQ5T752 114 aa2.53□□□□□ -2
TFRC-203ENST00000420415 MT3P25713 68 aa2.49□□□□□ -2.01
TFRC-203ENST00000420415 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
TFRC-203ENST00000420415 MT1AP04731 61 aa2.46□□□□□ -2.02
TFRC-203ENST00000420415 KRTAP4-7Q9BYR0 210 aa2.44□□□□□ -2.02
TFRC-203ENST00000420415 INE1O15225 51 aa2.38□□□□□ -2.03
TFRC-203ENST00000420415 SYNE1Q8NF91 8797 aaKnown RBP2.37□□□□□ -2.03
TFRC-203ENST00000420415 KRTAP5-4Q6L8H1 288 aa2.36□□□□□ -2.03
TFRC-203ENST00000420415 KRTAP9-9Q9BYP9 154 aa2.36□□□□□ -2.03
TFRC-203ENST00000420415 DSTQ03001 7570 aaKnown RBP2.35□□□□□ -2.03
TFRC-203ENST00000420415 KRTAP20-2Q3LI61 65 aa2.34□□□□□ -2.03
TFRC-203ENST00000420415 KRTAP4-6Q9BYQ5 205 aa2.32□□□□□ -2.04
TFRC-203ENST00000420415 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
TFRC-203ENST00000420415 LOC100996750A0A140TA64 210 aa2.32□□□□□ -2.04
TFRC-203ENST00000420415 KRTAP9-4Q9BYQ2 154 aa2.3□□□□□ -2.04
TFRC-203ENST00000420415 KRTAP5-3Q6L8H2 238 aa2.29□□□□□ -2.04
TFRC-203ENST00000420415 KRTAP6-2Q3LI66 62 aa2.25□□□□□ -2.05
TFRC-203ENST00000420415 KRTAP6-1Q3LI64 71 aa2.24□□□□□ -2.05
TFRC-203ENST00000420415 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
TFRC-203ENST00000420415 KRTAP4-11Q9BYQ6 195 aa2.2□□□□□ -2.06
TFRC-203ENST00000420415 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
TFRC-203ENST00000420415 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.07
TFRC-203ENST00000420415 OBSCNQ5VST9 7968 aa2.14□□□□□ -2.07
TFRC-203ENST00000420415 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
TFRC-203ENST00000420415 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
TFRC-203ENST00000420415 LCE3EQ5T5B0 92 aa2.11□□□□□ -2.07
TFRC-203ENST00000420415 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
TFRC-203ENST00000420415 KRTAP5-5Q701N2 237 aaPredicted RBP2.08□□□□□ -2.08
TFRC-203ENST00000420415 KRTAP9-6A8MVA2 160 aa1.98□□□□□ -2.09
TFRC-203ENST00000420415 LCE1EQ5T753 118 aa1.98□□□□□ -2.09
TFRC-203ENST00000420415 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
TFRC-203ENST00000420415 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
TFRC-203ENST00000420415 LCE1CQ5T751 118 aa1.93□□□□□ -2.1
TFRC-203ENST00000420415 LCE1FQ5T754 118 aa1.93□□□□□ -2.1
TFRC-203ENST00000420415 KRTAP5-2Q701N4 177 aa1.93□□□□□ -2.1
TFRC-203ENST00000420415 MUC5ACP98088 5654 aa1.84□□□□□ -2.11
TFRC-203ENST00000420415 KRTAP4-12Q9BQ66 201 aa1.73□□□□□ -2.13
TFRC-203ENST00000420415 KRTAP4-2Q9BYR5 136 aa1.73□□□□□ -2.13
TFRC-203ENST00000420415 KRTAP5-1Q6L8H4 278 aa1.7□□□□□ -2.14
TFRC-203ENST00000420415 MUC5BQ9HC84 5762 aaPredicted RBP1.67□□□□□ -2.14
TFRC-203ENST00000420415 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
TFRC-203ENST00000420415 PRM1P04553 51 aa1.59□□□□□ -2.16
TFRC-203ENST00000420415 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
TFRC-203ENST00000420415 MUC19Q7Z5P9 8384 aa1.52□□□□□ -2.17
TFRC-203ENST00000420415 KRTAP4-4Q9BYR3 166 aa1.46□□□□□ -2.18
TFRC-203ENST00000420415 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.44□□□□□ -2.18
TFRC-203ENST00000420415 KRTAP21-2Q3LI59 83 aa1.29□□□□□ -2.2
TFRC-203ENST00000420415 KRTAP21-1Q3LI58 79 aa1.27□□□□□ -2.21
TFRC-203ENST00000420415 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 13.5 ms