RNA–Protein interactions for RNA: ENST00000419205.5

FAM3A-208, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-208ENST00000419205 MACF1Q9UPN3 7388 aaKnown RBP7.17□□□□□ -1.26
FAM3A-208ENST00000419205 KRTAP4-7Q9BYR0 210 aa7.15□□□□□ -1.26
FAM3A-208ENST00000419205 KRTAP9-6A8MVA2 160 aa7.14□□□□□ -1.27
FAM3A-208ENST00000419205 KRTAP9-7A8MTY7 169 aa7.13□□□□□ -1.27
FAM3A-208ENST00000419205 SYNE2Q8WXH0 6885 aaKnown RBP7.05□□□□□ -1.28
FAM3A-208ENST00000419205 KRTAP19-3Q7Z4W3 81 aa6.97□□□□□ -1.29
FAM3A-208ENST00000419205 KRTAP6-3Q3LI67 103 aa6.95□□□□□ -1.3
FAM3A-208ENST00000419205 MT1GP13640 62 aa6.94□□□□□ -1.3
FAM3A-208ENST00000419205 MT1MQ8N339 61 aa6.9□□□□□ -1.31
FAM3A-208ENST00000419205 KRTAP2-3P0C7H8 128 aa6.83□□□□□ -1.32
FAM3A-208ENST00000419205 KRTAP2-4Q9BYR9 128 aa6.83□□□□□ -1.32
FAM3A-208ENST00000419205 KRTAP2-1Q9BYU5 128 aa6.83□□□□□ -1.32
FAM3A-208ENST00000419205 SPRR2FQ96RM1 72 aa6.82□□□□□ -1.32
FAM3A-208ENST00000419205 KRTAP4-3Q9BYR4 195 aa6.81□□□□□ -1.32
FAM3A-208ENST00000419205 KRTAP5-9P26371 169 aa6.8□□□□□ -1.32
FAM3A-208ENST00000419205 INE1O15225 51 aa6.79□□□□□ -1.32
FAM3A-208ENST00000419205 LCE5AQ5TCM9 118 aa6.79□□□□□ -1.32
FAM3A-208ENST00000419205 MUC12Q9UKN1 5478 aa6.76□□□□□ -1.33
FAM3A-208ENST00000419205 LOC100996750A0A140TA64 210 aa6.69□□□□□ -1.34
FAM3A-208ENST00000419205 NEBP20929 6669 aa6.62□□□□□ -1.35
FAM3A-208ENST00000419205 MDN1Q9NU22 5596 aa6.57□□□□□ -1.36
FAM3A-208ENST00000419205 LCE1AQ5T7P2 110 aa6.48□□□□□ -1.37
FAM3A-208ENST00000419205 SPRR2EP22531 72 aa6.4□□□□□ -1.38
FAM3A-208ENST00000419205 SPRR2BP35325 72 aa6.4□□□□□ -1.38
FAM3A-208ENST00000419205 SPRR2AP35326 72 aa6.4□□□□□ -1.38
FAM3A-208ENST00000419205 KRTAP20-1Q3LI63 56 aa6.25□□□□□ -1.41
FAM3A-208ENST00000419205 DSTQ03001 7570 aaKnown RBP6.24□□□□□ -1.41
FAM3A-208ENST00000419205 MT1AP04731 61 aa6.18□□□□□ -1.42
FAM3A-208ENST00000419205 SPRR2DP22532 72 aa6.18□□□□□ -1.42
FAM3A-208ENST00000419205 KRTAP5-5Q701N2 237 aaPredicted RBP6.18□□□□□ -1.42
FAM3A-208ENST00000419205 KRTAP6-1Q3LI64 71 aa6.15□□□□□ -1.43
FAM3A-208ENST00000419205 LCE3BQ5TA77 95 aa6.09□□□□□ -1.43
FAM3A-208ENST00000419205 KRTAP2-2Q9BYT5 123 aa6.01□□□□□ -1.45
FAM3A-208ENST00000419205 KRTAP12-4P60329 112 aa5.88□□□□□ -1.47
FAM3A-208ENST00000419205 KRTAP4-9Q9BYQ8 210 aa5.85□□□□□ -1.47
FAM3A-208ENST00000419205 KRTAP9-4Q9BYQ2 154 aa5.83□□□□□ -1.48
FAM3A-208ENST00000419205 SYNE1Q8NF91 8797 aaKnown RBP5.74□□□□□ -1.49
FAM3A-208ENST00000419205 LCE3DQ9BYE3 92 aa5.7□□□□□ -1.5
FAM3A-208ENST00000419205 KRTAP5-4Q6L8H1 288 aa5.65□□□□□ -1.51
FAM3A-208ENST00000419205 LCE3EQ5T5B0 92 aa5.61□□□□□ -1.51
FAM3A-208ENST00000419205 KRTAP6-2Q3LI66 62 aa5.57□□□□□ -1.52
FAM3A-208ENST00000419205 MT3P25713 68 aa5.56□□□□□ -1.52
FAM3A-208ENST00000419205 LCE4AQ5TA78 99 aa5.52□□□□□ -1.53
FAM3A-208ENST00000419205 LCE1DQ5T752 114 aa5.44□□□□□ -1.54
FAM3A-208ENST00000419205 HMCN1Q96RW7 5635 aa5.38□□□□□ -1.55
FAM3A-208ENST00000419205 MT4P47944 62 aa5.37□□□□□ -1.55
FAM3A-208ENST00000419205 KRTAP4-6Q9BYQ5 205 aa5.32□□□□□ -1.56
FAM3A-208ENST00000419205 KRTAP20-2Q3LI61 65 aa5.26□□□□□ -1.57
FAM3A-208ENST00000419205 KRTAP5-2Q701N4 177 aa5.21□□□□□ -1.57
FAM3A-208ENST00000419205 PRM1P04553 51 aa5.14□□□□□ -1.59
FAM3A-208ENST00000419205 GPR98Q8WXG9 6306 aa5.1□□□□□ -1.59
FAM3A-208ENST00000419205 AHNAK2Q8IVF2 5795 aa5.07□□□□□ -1.6
FAM3A-208ENST00000419205 KRTAP5-3Q6L8H2 238 aa5.05□□□□□ -1.6
FAM3A-208ENST00000419205 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
FAM3A-208ENST00000419205 KRTAP5-10Q6L8G5 202 aa4.94□□□□□ -1.62
FAM3A-208ENST00000419205 LCE1EQ5T753 118 aa4.71□□□□□ -1.66
FAM3A-208ENST00000419205 KRTAP5-7Q6L8G8 165 aa4.7□□□□□ -1.66
FAM3A-208ENST00000419205 KRTAP4-11Q9BYQ6 195 aa4.64□□□□□ -1.67
FAM3A-208ENST00000419205 MUC5ACP98088 5654 aa4.51□□□□□ -1.69
FAM3A-208ENST00000419205 KRTAP5-8O75690 187 aa4.5□□□□□ -1.69
FAM3A-208ENST00000419205 KRTAP5-1Q6L8H4 278 aa4.44□□□□□ -1.7
FAM3A-208ENST00000419205 LCE1BQ5T7P3 118 aa4.43□□□□□ -1.7
FAM3A-208ENST00000419205 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
FAM3A-208ENST00000419205 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
FAM3A-208ENST00000419205 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.17□□□□□ -1.74
FAM3A-208ENST00000419205 KRTAP9-9Q9BYP9 154 aa4.14□□□□□ -1.75
FAM3A-208ENST00000419205 MUC5BQ9HC84 5762 aaPredicted RBP4.12□□□□□ -1.75
FAM3A-208ENST00000419205 AHNAKQ09666 5890 aaKnown RBP4.07□□□□□ -1.76
FAM3A-208ENST00000419205 KRTAP21-2Q3LI59 83 aa4.01□□□□□ -1.77
FAM3A-208ENST00000419205 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.8
FAM3A-208ENST00000419205 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
FAM3A-208ENST00000419205 KRTAP4-12Q9BQ66 201 aa3.51□□□□□ -1.85
FAM3A-208ENST00000419205 LCE1FQ5T754 118 aa3.38□□□□□ -1.87
FAM3A-208ENST00000419205 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
FAM3A-208ENST00000419205 KRTAP21-1Q3LI58 79 aa3.25□□□□□ -1.89
FAM3A-208ENST00000419205 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
FAM3A-208ENST00000419205 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 9.3 ms