RNA–Protein interactions for RNA: ENST00000417762.5

SHPRH-204, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-204ENST00000417762 MT1FP04733 61 aa3.37□□□□□ -1.87
SHPRH-204ENST00000417762 SPRR2GQ9BYE4 73 aa3.37□□□□□ -1.87
SHPRH-204ENST00000417762 KRTAP10-10P60014 251 aa3.36□□□□□ -1.87
SHPRH-204ENST00000417762 KRTAP25-1Q3LHN0 102 aa3.31□□□□□ -1.88
SHPRH-204ENST00000417762 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
SHPRH-204ENST00000417762 KRTAP5-2Q701N4 177 aa3.31□□□□□ -1.88
SHPRH-204ENST00000417762 C10orf95Q9H7T3 257 aa3.31□□□□□ -1.88
SHPRH-204ENST00000417762 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
SHPRH-204ENST00000417762 CAMK2N1Q7Z7J9 78 aa3.29□□□□□ -1.88
SHPRH-204ENST00000417762 KRTAP19-8Q3LI54 63 aa3.27□□□□□ -1.89
SHPRH-204ENST00000417762 PLAC4Q8WY50 150 aa3.27□□□□□ -1.89
SHPRH-204ENST00000417762 MT1BP07438 61 aa3.22□□□□□ -1.89
SHPRH-204ENST00000417762 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
SHPRH-204ENST00000417762 TNP1P09430 55 aa3.16□□□□□ -1.9
SHPRH-204ENST00000417762 MT1XP80297 61 aa3.14□□□□□ -1.91
SHPRH-204ENST00000417762 PP632Q6XCG6 107 aa3.13□□□□□ -1.91
SHPRH-204ENST00000417762 PRO2289Q9P1D8 64 aa3.07□□□□□ -1.92
SHPRH-204ENST00000417762 KRTAP5-5Q701N2 237 aaPredicted RBP3.05□□□□□ -1.92
SHPRH-204ENST00000417762 USH2AO75445 5202 aa2.99□□□□□ -1.93
SHPRH-204ENST00000417762 KRTAP8-1Q8IUC2 63 aa2.97□□□□□ -1.93
SHPRH-204ENST00000417762 KRTAP19-6Q3LI70 58 aa2.95□□□□□ -1.94
SHPRH-204ENST00000417762 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
SHPRH-204ENST00000417762 LCE1BQ5T7P3 118 aa2.91□□□□□ -1.94
SHPRH-204ENST00000417762 KRTAP12-3P60328 96 aa2.89□□□□□ -1.95
SHPRH-204ENST00000417762 SSPOA2VEC9 5147 aa2.87□□□□□ -1.95
SHPRH-204ENST00000417762 KRTAP19-5Q3LI72 72 aa2.85□□□□□ -1.95
SHPRH-204ENST00000417762 SPRR5A0A1B0GTR4 108 aa2.83□□□□□ -1.96
SHPRH-204ENST00000417762 KRTAP19-7Q3SYF9 63 aa2.8□□□□□ -1.96
SHPRH-204ENST00000417762 KMT2DO14686 5537 aa2.76□□□□□ -1.97
SHPRH-204ENST00000417762 KRTAP5-8O75690 187 aa2.75□□□□□ -1.97
SHPRH-204ENST00000417762 MT1EP04732 61 aa2.74□□□□□ -1.97
SHPRH-204ENST00000417762 LUZP6Q538Z0 58 aa2.74□□□□□ -1.97
SHPRH-204ENST00000417762 FCGBPQ9Y6R7 5405 aaPredicted RBP2.74□□□□□ -1.97
SHPRH-204ENST00000417762 CRCT1Q9UGL9 99 aa2.71□□□□□ -1.98
SHPRH-204ENST00000417762 MT1LQ93083 61 aa2.7□□□□□ -1.98
SHPRH-204ENST00000417762 FSIP2Q5CZC0 6907 aa2.67□□□□□ -1.98
SHPRH-204ENST00000417762 KRTAP19-3Q7Z4W3 81 aa2.61□□□□□ -1.99
SHPRH-204ENST00000417762 MT1GP13640 62 aa2.6□□□□□ -1.99
SHPRH-204ENST00000417762 SPRR2FQ96RM1 72 aa2.6□□□□□ -1.99
SHPRH-204ENST00000417762 MT1MQ8N339 61 aa2.57□□□□□ -2
SHPRH-204ENST00000417762 MUC12Q9UKN1 5478 aa2.51□□□□□ -2.01
SHPRH-204ENST00000417762 MACF1Q9UPN3 7388 aaKnown RBP2.51□□□□□ -2.01
SHPRH-204ENST00000417762 KRTAP6-3Q3LI67 103 aa2.48□□□□□ -2.01
SHPRH-204ENST00000417762 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
SHPRH-204ENST00000417762 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.01
SHPRH-204ENST00000417762 SPRR2EP22531 72 aa2.45□□□□□ -2.02
SHPRH-204ENST00000417762 SPRR2BP35325 72 aa2.45□□□□□ -2.02
SHPRH-204ENST00000417762 SPRR2AP35326 72 aa2.45□□□□□ -2.02
SHPRH-204ENST00000417762 KRTAP2-3P0C7H8 128 aa2.43□□□□□ -2.02
SHPRH-204ENST00000417762 KRTAP2-4Q9BYR9 128 aa2.43□□□□□ -2.02
SHPRH-204ENST00000417762 KRTAP2-1Q9BYU5 128 aa2.43□□□□□ -2.02
SHPRH-204ENST00000417762 KRTAP5-7Q6L8G8 165 aa2.39□□□□□ -2.03
SHPRH-204ENST00000417762 MDN1Q9NU22 5596 aa2.37□□□□□ -2.03
SHPRH-204ENST00000417762 SPRR2DP22532 72 aa2.36□□□□□ -2.03
SHPRH-204ENST00000417762 SYNE2Q8WXH0 6885 aaKnown RBP2.35□□□□□ -2.03
SHPRH-204ENST00000417762 MT1AP04731 61 aa2.3□□□□□ -2.04
SHPRH-204ENST00000417762 DSTQ03001 7570 aaKnown RBP2.29□□□□□ -2.04
SHPRH-204ENST00000417762 INE1O15225 51 aa2.28□□□□□ -2.04
SHPRH-204ENST00000417762 KRTAP6-1Q3LI64 71 aa2.28□□□□□ -2.04
SHPRH-204ENST00000417762 NEBP20929 6669 aa2.16□□□□□ -2.06
SHPRH-204ENST00000417762 SYNE1Q8NF91 8797 aaKnown RBP2.16□□□□□ -2.06
SHPRH-204ENST00000417762 KRTAP12-4P60329 112 aa2.11□□□□□ -2.07
SHPRH-204ENST00000417762 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
SHPRH-204ENST00000417762 HMCN1Q96RW7 5635 aa2.07□□□□□ -2.08
SHPRH-204ENST00000417762 KRTAP20-1Q3LI63 56 aa2.07□□□□□ -2.08
SHPRH-204ENST00000417762 KRTAP6-2Q3LI66 62 aa2.07□□□□□ -2.08
SHPRH-204ENST00000417762 MT4P47944 62 aa2.04□□□□□ -2.08
SHPRH-204ENST00000417762 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
SHPRH-204ENST00000417762 PRM1P04553 51 aa1.79□□□□□ -2.12
SHPRH-204ENST00000417762 KRTAP5-10Q6L8G5 202 aa1.68□□□□□ -2.14
SHPRH-204ENST00000417762 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
SHPRH-204ENST00000417762 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
SHPRH-204ENST00000417762 GPR98Q8WXG9 6306 aa1.37□□□□□ -2.19
SHPRH-204ENST00000417762 MUC5BQ9HC84 5762 aaPredicted RBP1.35□□□□□ -2.19
SHPRH-204ENST00000417762 PHGR1C9JFL3 82 aa1.25□□□□□ -2.21
SHPRH-204ENST00000417762 AHNAKQ09666 5890 aaKnown RBP1.2□□□□□ -2.22
SHPRH-204ENST00000417762 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
SHPRH-204ENST00000417762 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 1221.4 ms