RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 MUC2Q02817 5179 aa4.33□□□□□ -1.72
SCAF8-203ENST00000417268 MT1EP04732 61 aa4.32□□□□□ -1.72
SCAF8-203ENST00000417268 KRTAP9-6A0A140TA67 174 aa4.3□□□□□ -1.72
SCAF8-203ENST00000417268 MT1LQ93083 61 aa4.29□□□□□ -1.72
SCAF8-203ENST00000417268 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
SCAF8-203ENST00000417268 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
SCAF8-203ENST00000417268 MT1MQ8N339 61 aa4.15□□□□□ -1.74
SCAF8-203ENST00000417268 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
SCAF8-203ENST00000417268 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
SCAF8-203ENST00000417268 LCE3EQ5T5B0 92 aa4.06□□□□□ -1.76
SCAF8-203ENST00000417268 KRTAP9-7A8MTY7 169 aa4.02□□□□□ -1.77
SCAF8-203ENST00000417268 KRTAP6-3Q3LI67 103 aa4.02□□□□□ -1.77
SCAF8-203ENST00000417268 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.98□□□□□ -1.77
SCAF8-203ENST00000417268 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
SCAF8-203ENST00000417268 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
SCAF8-203ENST00000417268 USH2AO75445 5202 aa3.95□□□□□ -1.78
SCAF8-203ENST00000417268 OBSCNQ5VST9 7968 aa3.93□□□□□ -1.78
SCAF8-203ENST00000417268 LOC100996750A0A140TA64 210 aa3.9□□□□□ -1.78
SCAF8-203ENST00000417268 PRM1P04553 51 aa3.89□□□□□ -1.79
SCAF8-203ENST00000417268 MT4P47944 62 aa3.89□□□□□ -1.79
SCAF8-203ENST00000417268 KRTAP2-3P0C7H8 128 aa3.88□□□□□ -1.79
SCAF8-203ENST00000417268 KRTAP2-4Q9BYR9 128 aa3.88□□□□□ -1.79
SCAF8-203ENST00000417268 KRTAP2-1Q9BYU5 128 aa3.88□□□□□ -1.79
SCAF8-203ENST00000417268 MT3P25713 68 aa3.85□□□□□ -1.79
SCAF8-203ENST00000417268 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.79
SCAF8-203ENST00000417268 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
SCAF8-203ENST00000417268 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
SCAF8-203ENST00000417268 MT1AP04731 61 aa3.81□□□□□ -1.8
SCAF8-203ENST00000417268 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
SCAF8-203ENST00000417268 KRTAP4-9Q9BYQ8 210 aa3.71□□□□□ -1.82
SCAF8-203ENST00000417268 FCGBPQ9Y6R7 5405 aaPredicted RBP3.7□□□□□ -1.82
SCAF8-203ENST00000417268 KRTAP2-2Q9BYT5 123 aa3.68□□□□□ -1.82
SCAF8-203ENST00000417268 SSPOA2VEC9 5147 aa3.66□□□□□ -1.82
SCAF8-203ENST00000417268 MACF1Q9UPN3 7388 aaKnown RBP3.64□□□□□ -1.83
SCAF8-203ENST00000417268 LCE4AQ5TA78 99 aa3.63□□□□□ -1.83
SCAF8-203ENST00000417268 KRTAP5-9P26371 169 aa3.63□□□□□ -1.83
SCAF8-203ENST00000417268 KRTAP6-1Q3LI64 71 aa3.58□□□□□ -1.84
SCAF8-203ENST00000417268 DSTQ03001 7570 aaKnown RBP3.56□□□□□ -1.84
SCAF8-203ENST00000417268 KMT2DO14686 5537 aa3.56□□□□□ -1.84
SCAF8-203ENST00000417268 LCE1DQ5T752 114 aa3.54□□□□□ -1.84
SCAF8-203ENST00000417268 LCE1BQ5T7P3 118 aa3.53□□□□□ -1.84
SCAF8-203ENST00000417268 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
SCAF8-203ENST00000417268 KRTAP6-2Q3LI66 62 aa3.49□□□□□ -1.85
SCAF8-203ENST00000417268 MUC12Q9UKN1 5478 aa3.46□□□□□ -1.86
SCAF8-203ENST00000417268 NEBP20929 6669 aa3.4□□□□□ -1.86
SCAF8-203ENST00000417268 MDN1Q9NU22 5596 aa3.31□□□□□ -1.88
SCAF8-203ENST00000417268 MUC19Q7Z5P9 8384 aa3.3□□□□□ -1.88
SCAF8-203ENST00000417268 KRTAP4-6Q9BYQ5 205 aa3.18□□□□□ -1.9
SCAF8-203ENST00000417268 KRTAP20-2Q3LI61 65 aa3.15□□□□□ -1.91
SCAF8-203ENST00000417268 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
SCAF8-203ENST00000417268 KRTAP9-9Q9BYP9 154 aa2.99□□□□□ -1.93
SCAF8-203ENST00000417268 KRTAP5-5Q701N2 237 aaPredicted RBP2.98□□□□□ -1.93
SCAF8-203ENST00000417268 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
SCAF8-203ENST00000417268 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
SCAF8-203ENST00000417268 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
SCAF8-203ENST00000417268 LCE1FQ5T754 118 aa2.94□□□□□ -1.94
SCAF8-203ENST00000417268 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
SCAF8-203ENST00000417268 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
SCAF8-203ENST00000417268 MUC5ACP98088 5654 aa2.6□□□□□ -1.99
SCAF8-203ENST00000417268 HMCN1Q96RW7 5635 aa2.6□□□□□ -1.99
SCAF8-203ENST00000417268 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
SCAF8-203ENST00000417268 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
SCAF8-203ENST00000417268 KRTAP4-12Q9BQ66 201 aa2.53□□□□□ -2
SCAF8-203ENST00000417268 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2
SCAF8-203ENST00000417268 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
SCAF8-203ENST00000417268 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
SCAF8-203ENST00000417268 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
SCAF8-203ENST00000417268 KRTAP5-10Q6L8G5 202 aa2.2□□□□□ -2.06
SCAF8-203ENST00000417268 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
SCAF8-203ENST00000417268 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
SCAF8-203ENST00000417268 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
SCAF8-203ENST00000417268 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
SCAF8-203ENST00000417268 KRTAP5-6Q6L8G9 129 aaPredicted RBP2□□□□□ -2.09
SCAF8-203ENST00000417268 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
SCAF8-203ENST00000417268 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
SCAF8-203ENST00000417268 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
SCAF8-203ENST00000417268 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 72.7 ms