RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
MDC1-203ENST00000417033 GPR98Q8WXG9 6306 aa3.25□□□□□ -1.89
MDC1-203ENST00000417033 MUC12Q9UKN1 5478 aa3.24□□□□□ -1.89
MDC1-203ENST00000417033 CDC42SE1Q9NRR8 79 aa3.24□□□□□ -1.89
MDC1-203ENST00000417033 C10orf95Q9H7T3 257 aa3.23□□□□□ -1.89
MDC1-203ENST00000417033 KRTAP10-12P60413 245 aa3.19□□□□□ -1.9
MDC1-203ENST00000417033 K7ERS5 55 aa3.18□□□□□ -1.9
MDC1-203ENST00000417033 BRK1Q8WUW1 75 aa3.17□□□□□ -1.9
MDC1-203ENST00000417033 MDN1Q9NU22 5596 aa3.12□□□□□ -1.91
MDC1-203ENST00000417033 KMT2DO14686 5537 aa3.11□□□□□ -1.91
MDC1-203ENST00000417033 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
MDC1-203ENST00000417033 TNP1P09430 55 aa3.1□□□□□ -1.91
MDC1-203ENST00000417033 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
MDC1-203ENST00000417033 KRTAP8-1Q8IUC2 63 aa3.1□□□□□ -1.91
MDC1-203ENST00000417033 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
MDC1-203ENST00000417033 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
MDC1-203ENST00000417033 LCE3AQ5TA76 89 aa3.08□□□□□ -1.92
MDC1-203ENST00000417033 ROMO1P60602 79 aa3.07□□□□□ -1.92
MDC1-203ENST00000417033 KRTAP5-9P26371 169 aa3.06□□□□□ -1.92
MDC1-203ENST00000417033 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
MDC1-203ENST00000417033 SPRR2FQ96RM1 72 aa3.04□□□□□ -1.92
MDC1-203ENST00000417033 KRTAP19-7Q3SYF9 63 aa3.03□□□□□ -1.92
MDC1-203ENST00000417033 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
MDC1-203ENST00000417033 MT1EP04732 61 aa2.98□□□□□ -1.93
MDC1-203ENST00000417033 KRTAP2-1Q9BYU5 128 aa2.97□□□□□ -1.93
MDC1-203ENST00000417033 PMAIP1Q13794 54 aa2.96□□□□□ -1.94
MDC1-203ENST00000417033 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
MDC1-203ENST00000417033 PRO0628Q9UI54 55 aa2.96□□□□□ -1.94
MDC1-203ENST00000417033 SPRR2EP22531 72 aa2.95□□□□□ -1.94
MDC1-203ENST00000417033 SPRR2BP35325 72 aa2.95□□□□□ -1.94
MDC1-203ENST00000417033 SPRR2AP35326 72 aa2.95□□□□□ -1.94
MDC1-203ENST00000417033 KRTAP12-3P60328 96 aa2.93□□□□□ -1.94
MDC1-203ENST00000417033 LCE3CQ5T5A8 94 aa2.9□□□□□ -1.95
MDC1-203ENST00000417033 MT1LQ93083 61 aa2.9□□□□□ -1.95
MDC1-203ENST00000417033 KRTAP19-3Q7Z4W3 81 aa2.89□□□□□ -1.95
MDC1-203ENST00000417033 PP632Q6XCG6 107 aa2.86□□□□□ -1.95
MDC1-203ENST00000417033 SPRR2DP22532 72 aa2.83□□□□□ -1.96
MDC1-203ENST00000417033 MT1MQ8N339 61 aa2.82□□□□□ -1.96
MDC1-203ENST00000417033 MT1GP13640 62 aa2.81□□□□□ -1.96
MDC1-203ENST00000417033 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
MDC1-203ENST00000417033 KRTAP4-3Q9BYR4 195 aa2.81□□□□□ -1.96
MDC1-203ENST00000417033 KTN1-AS1Q86SY8 53 aa2.78□□□□□ -1.96
MDC1-203ENST00000417033 DSTQ03001 7570 aaKnown RBP2.77□□□□□ -1.97
MDC1-203ENST00000417033 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
MDC1-203ENST00000417033 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
MDC1-203ENST00000417033 HMCN1Q96RW7 5635 aa2.68□□□□□ -1.98
MDC1-203ENST00000417033 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
MDC1-203ENST00000417033 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
MDC1-203ENST00000417033 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
MDC1-203ENST00000417033 SPRR5A0A1B0GTR4 108 aa2.6□□□□□ -1.99
MDC1-203ENST00000417033 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
MDC1-203ENST00000417033 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
MDC1-203ENST00000417033 KRTAP5-4Q6L8H1 288 aa2.52□□□□□ -2.01
MDC1-203ENST00000417033 MT4P47944 62 aa2.49□□□□□ -2.01
MDC1-203ENST00000417033 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
MDC1-203ENST00000417033 MT1AP04731 61 aa2.46□□□□□ -2.02
MDC1-203ENST00000417033 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
MDC1-203ENST00000417033 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
MDC1-203ENST00000417033 SYNE1Q8NF91 8797 aaKnown RBP2.37□□□□□ -2.03
MDC1-203ENST00000417033 KRTAP12-4P60329 112 aa2.37□□□□□ -2.03
MDC1-203ENST00000417033 KRTAP20-2Q3LI61 65 aa2.37□□□□□ -2.03
MDC1-203ENST00000417033 MUC5BQ9HC84 5762 aaPredicted RBP2.36□□□□□ -2.03
MDC1-203ENST00000417033 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
MDC1-203ENST00000417033 KRTAP6-2Q3LI66 62 aa2.28□□□□□ -2.04
MDC1-203ENST00000417033 LUZP6Q538Z0 58 aa2.26□□□□□ -2.05
MDC1-203ENST00000417033 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
MDC1-203ENST00000417033 LCE3DQ9BYE3 92 aa2.2□□□□□ -2.06
MDC1-203ENST00000417033 OBSCNQ5VST9 7968 aa2.19□□□□□ -2.06
MDC1-203ENST00000417033 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
MDC1-203ENST00000417033 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
MDC1-203ENST00000417033 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
MDC1-203ENST00000417033 INE1O15225 51 aa1.69□□□□□ -2.14
MDC1-203ENST00000417033 MUC19Q7Z5P9 8384 aa1.62□□□□□ -2.15
MDC1-203ENST00000417033 PRM1P04553 51 aa1.62□□□□□ -2.15
MDC1-203ENST00000417033 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
MDC1-203ENST00000417033 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
MDC1-203ENST00000417033 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
MDC1-203ENST00000417033 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 132.5 ms