RNA–Protein interactions for RNA: ENST00000415947.1

PARD3B-205, Transcript of par-3 family cell polarity regulator beta, humanhuman

TSL 1 (best)

Gene PARD3B, Length 1,668 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-205ENST00000415947 LOC100996750A0A140TA64 210 aa8.1□□□□□ -1.11
PARD3B-205ENST00000415947 KRTAP4-6Q9BYQ5 205 aa8.1□□□□□ -1.11
PARD3B-205ENST00000415947 KRTAP19-3Q7Z4W3 81 aa8.08□□□□□ -1.12
PARD3B-205ENST00000415947 MUC12Q9UKN1 5478 aa8.08□□□□□ -1.12
PARD3B-205ENST00000415947 LCE3CQ5T5A8 94 aa8.05□□□□□ -1.12
PARD3B-205ENST00000415947 MT1GP13640 62 aa8.01□□□□□ -1.13
PARD3B-205ENST00000415947 SPRR5A0A1B0GTR4 108 aa7.98□□□□□ -1.13
PARD3B-205ENST00000415947 LCE5AQ5TCM9 118 aa7.95□□□□□ -1.14
PARD3B-205ENST00000415947 LCE1AQ5T7P2 110 aa7.94□□□□□ -1.14
PARD3B-205ENST00000415947 KRTAP4-7Q9BYR0 210 aa7.92□□□□□ -1.14
PARD3B-205ENST00000415947 MT1MQ8N339 61 aa7.89□□□□□ -1.15
PARD3B-205ENST00000415947 KRTAP9-7A8MTY7 169 aa7.89□□□□□ -1.15
PARD3B-205ENST00000415947 SPRR2EP22531 72 aa7.86□□□□□ -1.15
PARD3B-205ENST00000415947 SPRR2BP35325 72 aa7.86□□□□□ -1.15
PARD3B-205ENST00000415947 SPRR2AP35326 72 aa7.86□□□□□ -1.15
PARD3B-205ENST00000415947 MDN1Q9NU22 5596 aa7.83□□□□□ -1.16
PARD3B-205ENST00000415947 KRTAP4-3Q9BYR4 195 aa7.73□□□□□ -1.17
PARD3B-205ENST00000415947 LUZP6Q538Z0 58 aa7.63□□□□□ -1.19
PARD3B-205ENST00000415947 KRTAP9-6A8MVA2 160 aa7.61□□□□□ -1.19
PARD3B-205ENST00000415947 SPRR2DP22532 72 aa7.58□□□□□ -1.2
PARD3B-205ENST00000415947 NEBP20929 6669 aa7.57□□□□□ -1.2
PARD3B-205ENST00000415947 DSTQ03001 7570 aaKnown RBP7.47□□□□□ -1.21
PARD3B-205ENST00000415947 NDUFAF8A1L188 74 aa7.37□□□□□ -1.23
PARD3B-205ENST00000415947 LCE3BQ5TA77 95 aa7.29□□□□□ -1.24
PARD3B-205ENST00000415947 KRTAP5-5Q701N2 237 aaPredicted RBP7.15□□□□□ -1.27
PARD3B-205ENST00000415947 KRTAP2-3P0C7H8 128 aa7.12□□□□□ -1.27
PARD3B-205ENST00000415947 KRTAP2-4Q9BYR9 128 aa7.12□□□□□ -1.27
PARD3B-205ENST00000415947 KRTAP2-1Q9BYU5 128 aa7□□□□□ -1.29
PARD3B-205ENST00000415947 KRTAP20-1Q3LI63 56 aa6.99□□□□□ -1.29
PARD3B-205ENST00000415947 MT1AP04731 61 aa6.97□□□□□ -1.29
PARD3B-205ENST00000415947 KRTAP2-2Q9BYT5 123 aa6.96□□□□□ -1.29
PARD3B-205ENST00000415947 KRTAP6-1Q3LI64 71 aa6.9□□□□□ -1.3
PARD3B-205ENST00000415947 KRTAP5-4Q6L8H1 288 aa6.87□□□□□ -1.31
PARD3B-205ENST00000415947 LCE4AQ5TA78 99 aa6.75□□□□□ -1.33
PARD3B-205ENST00000415947 SYNE1Q8NF91 8797 aaKnown RBP6.73□□□□□ -1.33
PARD3B-205ENST00000415947 KRTAP12-4P60329 112 aa6.65□□□□□ -1.35
PARD3B-205ENST00000415947 KRTAP9-4Q9BYQ2 154 aa6.65□□□□□ -1.35
PARD3B-205ENST00000415947 MT4P47944 62 aa6.58□□□□□ -1.36
PARD3B-205ENST00000415947 KRTAP9-9Q9BYP9 154 aa6.52□□□□□ -1.37
PARD3B-205ENST00000415947 KRTAP4-9Q9BYQ8 210 aa6.52□□□□□ -1.37
PARD3B-205ENST00000415947 LCE1DQ5T752 114 aa6.49□□□□□ -1.37
PARD3B-205ENST00000415947 A0A0A0MQY5 61 aa6.44□□□□□ -1.38
PARD3B-205ENST00000415947 KRTAP20-2Q3LI61 65 aa6.41□□□□□ -1.38
PARD3B-205ENST00000415947 KRTAP6-2Q3LI66 62 aa6.37□□□□□ -1.39
PARD3B-205ENST00000415947 KRTAP5-3Q6L8H2 238 aa6.33□□□□□ -1.4
PARD3B-205ENST00000415947 HMCN1Q96RW7 5635 aa6.33□□□□□ -1.4
PARD3B-205ENST00000415947 MT3P25713 68 aa6.33□□□□□ -1.4
PARD3B-205ENST00000415947 KRTAP4-12Q9BQ66 201 aa6.28□□□□□ -1.4
PARD3B-205ENST00000415947 H3BS24 57 aa6.23□□□□□ -1.41
PARD3B-205ENST00000415947 KRTAP4-2Q9BYR5 136 aa6.23□□□□□ -1.41
PARD3B-205ENST00000415947 KRTAP5-2Q701N4 177 aa6.22□□□□□ -1.41
PARD3B-205ENST00000415947 INE1O15225 51 aa6.1□□□□□ -1.43
PARD3B-205ENST00000415947 LCE3DQ9BYE3 92 aa6.03□□□□□ -1.44
PARD3B-205ENST00000415947 LCE3EQ5T5B0 92 aa5.85□□□□□ -1.47
PARD3B-205ENST00000415947 OBSCNQ5VST9 7968 aa5.81□□□□□ -1.48
PARD3B-205ENST00000415947 KRTAP4-11Q9BYQ6 195 aa5.75□□□□□ -1.49
PARD3B-205ENST00000415947 AHNAK2Q8IVF2 5795 aa5.64□□□□□ -1.51
PARD3B-205ENST00000415947 LCE1EQ5T753 118 aa5.54□□□□□ -1.52
PARD3B-205ENST00000415947 GPR98Q8WXG9 6306 aa5.49□□□□□ -1.53
PARD3B-205ENST00000415947 KRTAP5-10Q6L8G5 202 aa5.44□□□□□ -1.54
PARD3B-205ENST00000415947 KRTAP5-1Q6L8H4 278 aa5.39□□□□□ -1.55
PARD3B-205ENST00000415947 KRTAP5-8O75690 187 aa5.37□□□□□ -1.55
PARD3B-205ENST00000415947 KRTAP5-7Q6L8G8 165 aa5.21□□□□□ -1.58
PARD3B-205ENST00000415947 LCE1CQ5T751 118 aa5.15□□□□□ -1.58
PARD3B-205ENST00000415947 LCE1BQ5T7P3 118 aa5.15□□□□□ -1.58
PARD3B-205ENST00000415947 MUC5ACP98088 5654 aa5.1□□□□□ -1.59
PARD3B-205ENST00000415947 PRM1P04553 51 aa5.05□□□□□ -1.6
PARD3B-205ENST00000415947 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.82□□□□□ -1.64
PARD3B-205ENST00000415947 MUC5BQ9HC84 5762 aaPredicted RBP4.55□□□□□ -1.68
PARD3B-205ENST00000415947 KRTAP5-11Q6L8G4 156 aa4.54□□□□□ -1.68
PARD3B-205ENST00000415947 KRTAP21-2Q3LI59 83 aa4.54□□□□□ -1.68
PARD3B-205ENST00000415947 AHNAKQ09666 5890 aaKnown RBP4.33□□□□□ -1.72
PARD3B-205ENST00000415947 LCE1FQ5T754 118 aa4.14□□□□□ -1.75
PARD3B-205ENST00000415947 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
PARD3B-205ENST00000415947 PHGR1C9JFL3 82 aa3.9□□□□□ -1.78
PARD3B-205ENST00000415947 MUC19Q7Z5P9 8384 aa3.46□□□□□ -1.85
PARD3B-205ENST00000415947 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
PARD3B-205ENST00000415947 MUC16Q8WXI7 14507 aa2.48□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 208.7 ms