RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
HNF4A-204ENST00000415691 KRTAP19-7Q3SYF9 63 aa4.74□□□□□ -1.65
HNF4A-204ENST00000415691 SPRR2FQ96RM1 72 aa4.74□□□□□ -1.65
HNF4A-204ENST00000415691 KRTAP5-9P26371 169 aa4.73□□□□□ -1.65
HNF4A-204ENST00000415691 MUC12Q9UKN1 5478 aa4.73□□□□□ -1.65
HNF4A-204ENST00000415691 KRTAP2-3P0C7H8 128 aa4.72□□□□□ -1.65
HNF4A-204ENST00000415691 KRTAP2-4Q9BYR9 128 aa4.72□□□□□ -1.65
HNF4A-204ENST00000415691 KRTAP2-1Q9BYU5 128 aa4.72□□□□□ -1.65
HNF4A-204ENST00000415691 MDN1Q9NU22 5596 aa4.69□□□□□ -1.66
HNF4A-204ENST00000415691 MT1EP04732 61 aa4.66□□□□□ -1.66
HNF4A-204ENST00000415691 KRTAP9-6A8MVA2 160 aa4.62□□□□□ -1.67
HNF4A-204ENST00000415691 KRTAP19-4Q3LI73 84 aa4.59□□□□□ -1.67
HNF4A-204ENST00000415691 LCE1AQ5T7P2 110 aa4.56□□□□□ -1.68
HNF4A-204ENST00000415691 SPRR2EP22531 72 aa4.55□□□□□ -1.68
HNF4A-204ENST00000415691 SPRR2BP35325 72 aa4.55□□□□□ -1.68
HNF4A-204ENST00000415691 SPRR2AP35326 72 aa4.55□□□□□ -1.68
HNF4A-204ENST00000415691 NEBP20929 6669 aa4.54□□□□□ -1.68
HNF4A-204ENST00000415691 MT1LQ93083 61 aa4.53□□□□□ -1.68
HNF4A-204ENST00000415691 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
HNF4A-204ENST00000415691 LCE5AQ5TCM9 118 aa4.46□□□□□ -1.69
HNF4A-204ENST00000415691 MT1GP13640 62 aa4.44□□□□□ -1.7
HNF4A-204ENST00000415691 KRTAP4-7Q9BYR0 210 aa4.42□□□□□ -1.7
HNF4A-204ENST00000415691 MT1MQ8N339 61 aa4.4□□□□□ -1.71
HNF4A-204ENST00000415691 SPRR2DP22532 72 aa4.39□□□□□ -1.71
HNF4A-204ENST00000415691 KRTAP4-3Q9BYR4 195 aa4.37□□□□□ -1.71
HNF4A-204ENST00000415691 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
HNF4A-204ENST00000415691 LCE3BQ5TA77 95 aa4.24□□□□□ -1.73
HNF4A-204ENST00000415691 KRTAP12-4P60329 112 aa4.2□□□□□ -1.74
HNF4A-204ENST00000415691 KRTAP20-1Q3LI63 56 aa4.2□□□□□ -1.74
HNF4A-204ENST00000415691 LOC100996750A0A140TA64 210 aa4.16□□□□□ -1.74
HNF4A-204ENST00000415691 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
HNF4A-204ENST00000415691 KRTAP5-5Q701N2 237 aaPredicted RBP3.99□□□□□ -1.77
HNF4A-204ENST00000415691 MT1AP04731 61 aa3.92□□□□□ -1.78
HNF4A-204ENST00000415691 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.78
HNF4A-204ENST00000415691 KRTAP4-9Q9BYQ8 210 aa3.89□□□□□ -1.79
HNF4A-204ENST00000415691 LCE4AQ5TA78 99 aa3.86□□□□□ -1.79
HNF4A-204ENST00000415691 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
HNF4A-204ENST00000415691 MT4P47944 62 aa3.84□□□□□ -1.79
HNF4A-204ENST00000415691 KRTAP6-1Q3LI64 71 aa3.84□□□□□ -1.79
HNF4A-204ENST00000415691 KRTAP4-6Q9BYQ5 205 aa3.81□□□□□ -1.8
HNF4A-204ENST00000415691 LCE1DQ5T752 114 aa3.8□□□□□ -1.8
HNF4A-204ENST00000415691 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
HNF4A-204ENST00000415691 HMCN1Q96RW7 5635 aa3.77□□□□□ -1.81
HNF4A-204ENST00000415691 PRM1P04553 51 aa3.76□□□□□ -1.81
HNF4A-204ENST00000415691 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
HNF4A-204ENST00000415691 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
HNF4A-204ENST00000415691 KRTAP20-2Q3LI61 65 aa3.67□□□□□ -1.82
HNF4A-204ENST00000415691 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
HNF4A-204ENST00000415691 KRTAP5-3Q6L8H2 238 aa3.55□□□□□ -1.84
HNF4A-204ENST00000415691 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
HNF4A-204ENST00000415691 MT3P25713 68 aa3.48□□□□□ -1.85
HNF4A-204ENST00000415691 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
HNF4A-204ENST00000415691 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.87
HNF4A-204ENST00000415691 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
HNF4A-204ENST00000415691 KRTAP5-10Q6L8G5 202 aa3.28□□□□□ -1.88
HNF4A-204ENST00000415691 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
HNF4A-204ENST00000415691 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
HNF4A-204ENST00000415691 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
HNF4A-204ENST00000415691 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
HNF4A-204ENST00000415691 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
HNF4A-204ENST00000415691 LCE1FQ5T754 118 aa3.07□□□□□ -1.92
HNF4A-204ENST00000415691 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
HNF4A-204ENST00000415691 LCE1BQ5T7P3 118 aa2.93□□□□□ -1.94
HNF4A-204ENST00000415691 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
HNF4A-204ENST00000415691 LCE1CQ5T751 118 aa2.86□□□□□ -1.95
HNF4A-204ENST00000415691 KRTAP9-9Q9BYP9 154 aa2.85□□□□□ -1.95
HNF4A-204ENST00000415691 MUC5BQ9HC84 5762 aaPredicted RBP2.79□□□□□ -1.96
HNF4A-204ENST00000415691 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
HNF4A-204ENST00000415691 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.64□□□□□ -1.99
HNF4A-204ENST00000415691 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
HNF4A-204ENST00000415691 KRTAP4-12Q9BQ66 201 aa2.52□□□□□ -2.01
HNF4A-204ENST00000415691 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
HNF4A-204ENST00000415691 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
HNF4A-204ENST00000415691 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
HNF4A-204ENST00000415691 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
HNF4A-204ENST00000415691 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
HNF4A-204ENST00000415691 MUC16Q8WXI7 14507 aa1.42□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 109.6 ms