RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 FCGBPQ9Y6R7 5405 aaPredicted RBP4.19□□□□□ -1.74
DDB1-202ENST00000414411 PP632Q6XCG6 107 aa4.17□□□□□ -1.74
DDB1-202ENST00000414411 KRTAP10-5P60370 271 aa4.15□□□□□ -1.74
DDB1-202ENST00000414411 MT1XP80297 61 aa4.13□□□□□ -1.75
DDB1-202ENST00000414411 TNP1P09430 55 aa4.12□□□□□ -1.75
DDB1-202ENST00000414411 INE1O15225 51 aa4.09□□□□□ -1.76
DDB1-202ENST00000414411 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
DDB1-202ENST00000414411 MACF1Q9UPN3 7388 aaKnown RBP3.99□□□□□ -1.77
DDB1-202ENST00000414411 KRTAP10-7P60409 375 aaPredicted RBP3.94□□□□□ -1.78
DDB1-202ENST00000414411 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
DDB1-202ENST00000414411 KMT2DO14686 5537 aa3.91□□□□□ -1.78
DDB1-202ENST00000414411 LCE3AQ5TA76 89 aa3.91□□□□□ -1.78
DDB1-202ENST00000414411 KRTAP2-2Q9BYT5 123 aa3.89□□□□□ -1.79
DDB1-202ENST00000414411 MT3P25713 68 aa3.86□□□□□ -1.79
DDB1-202ENST00000414411 SPRR5A0A1B0GTR4 108 aa3.85□□□□□ -1.79
DDB1-202ENST00000414411 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.79
DDB1-202ENST00000414411 KRTAP6-3Q3LI67 103 aa3.8□□□□□ -1.8
DDB1-202ENST00000414411 KRTAP5-9P26371 169 aa3.78□□□□□ -1.8
DDB1-202ENST00000414411 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
DDB1-202ENST00000414411 KRTAP12-3P60328 96 aa3.74□□□□□ -1.81
DDB1-202ENST00000414411 MUC12Q9UKN1 5478 aa3.72□□□□□ -1.81
DDB1-202ENST00000414411 SPRR2FQ96RM1 72 aa3.7□□□□□ -1.82
DDB1-202ENST00000414411 KRTAP19-7Q3SYF9 63 aa3.7□□□□□ -1.82
DDB1-202ENST00000414411 MDN1Q9NU22 5596 aa3.69□□□□□ -1.82
DDB1-202ENST00000414411 KRTAP19-5Q3LI72 72 aa3.67□□□□□ -1.82
DDB1-202ENST00000414411 NEBP20929 6669 aa3.66□□□□□ -1.82
DDB1-202ENST00000414411 MT1EP04732 61 aa3.64□□□□□ -1.83
DDB1-202ENST00000414411 SPRR2EP22531 72 aa3.56□□□□□ -1.84
DDB1-202ENST00000414411 SPRR2BP35325 72 aa3.56□□□□□ -1.84
DDB1-202ENST00000414411 SPRR2AP35326 72 aa3.56□□□□□ -1.84
DDB1-202ENST00000414411 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
DDB1-202ENST00000414411 MT1LQ93083 61 aa3.52□□□□□ -1.85
DDB1-202ENST00000414411 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
DDB1-202ENST00000414411 KRTAP20-1Q3LI63 56 aa3.51□□□□□ -1.85
DDB1-202ENST00000414411 MT1GP13640 62 aa3.5□□□□□ -1.85
DDB1-202ENST00000414411 SPRR2DP22532 72 aa3.44□□□□□ -1.86
DDB1-202ENST00000414411 MT1MQ8N339 61 aa3.43□□□□□ -1.86
DDB1-202ENST00000414411 KRTAP2-3P0C7H8 128 aa3.4□□□□□ -1.87
DDB1-202ENST00000414411 KRTAP2-4Q9BYR9 128 aa3.4□□□□□ -1.87
DDB1-202ENST00000414411 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
DDB1-202ENST00000414411 KRTAP9-6A8MVA2 160 aa3.38□□□□□ -1.87
DDB1-202ENST00000414411 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
DDB1-202ENST00000414411 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.31□□□□□ -1.88
DDB1-202ENST00000414411 KRTAP2-1Q9BYU5 128 aa3.29□□□□□ -1.88
DDB1-202ENST00000414411 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
DDB1-202ENST00000414411 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
DDB1-202ENST00000414411 KRTAP5-5Q701N2 237 aaPredicted RBP3.15□□□□□ -1.91
DDB1-202ENST00000414411 KRTAP5-4Q6L8H1 288 aa3.11□□□□□ -1.91
DDB1-202ENST00000414411 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
DDB1-202ENST00000414411 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
DDB1-202ENST00000414411 MT1AP04731 61 aa2.99□□□□□ -1.93
DDB1-202ENST00000414411 MT4P47944 62 aa2.99□□□□□ -1.93
DDB1-202ENST00000414411 SYNE1Q8NF91 8797 aaKnown RBP2.98□□□□□ -1.93
DDB1-202ENST00000414411 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
DDB1-202ENST00000414411 KRTAP12-4P60329 112 aa2.96□□□□□ -1.94
DDB1-202ENST00000414411 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
DDB1-202ENST00000414411 KRTAP20-2Q3LI61 65 aa2.89□□□□□ -1.95
DDB1-202ENST00000414411 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
DDB1-202ENST00000414411 AHNAK2Q8IVF2 5795 aa2.79□□□□□ -1.96
DDB1-202ENST00000414411 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
DDB1-202ENST00000414411 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
DDB1-202ENST00000414411 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
DDB1-202ENST00000414411 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
DDB1-202ENST00000414411 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.99
DDB1-202ENST00000414411 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
DDB1-202ENST00000414411 KRTAP5-7Q6L8G8 165 aa2.6□□□□□ -1.99
DDB1-202ENST00000414411 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
DDB1-202ENST00000414411 PRM1P04553 51 aa2.46□□□□□ -2.02
DDB1-202ENST00000414411 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
DDB1-202ENST00000414411 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
DDB1-202ENST00000414411 AHNAKQ09666 5890 aaKnown RBP2.28□□□□□ -2.04
DDB1-202ENST00000414411 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
DDB1-202ENST00000414411 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
DDB1-202ENST00000414411 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
DDB1-202ENST00000414411 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
DDB1-202ENST00000414411 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
DDB1-202ENST00000414411 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
DDB1-202ENST00000414411 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 66.5 ms