RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 ABCA13Q86UQ4 5058 aa4.14□□□□□ -1.75
SMARCA4-202ENST00000413806 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
SMARCA4-202ENST00000413806 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
SMARCA4-202ENST00000413806 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
SMARCA4-202ENST00000413806 LCE2AQ5TA79 106 aaPredicted RBP4.08□□□□□ -1.76
SMARCA4-202ENST00000413806 KRTAP2-3P0C7H8 128 aa4.05□□□□□ -1.76
SMARCA4-202ENST00000413806 KRTAP2-4Q9BYR9 128 aa4.05□□□□□ -1.76
SMARCA4-202ENST00000413806 KRTAP2-1Q9BYU5 128 aa4.05□□□□□ -1.76
SMARCA4-202ENST00000413806 KRTAP9-2Q9BYQ4 174 aa4.05□□□□□ -1.76
SMARCA4-202ENST00000413806 MT1AP04731 61 aa4.03□□□□□ -1.76
SMARCA4-202ENST00000413806 RNF213Q63HN8 5207 aa4.02□□□□□ -1.77
SMARCA4-202ENST00000413806 FAT4Q6V0I7 4981 aa4.01□□□□□ -1.77
SMARCA4-202ENST00000413806 MT4P47944 62 aa3.98□□□□□ -1.77
SMARCA4-202ENST00000413806 UBR4Q5T4S7 5183 aa3.97□□□□□ -1.77
SMARCA4-202ENST00000413806 HMCN2Q8NDA2 5059 aa3.97□□□□□ -1.77
SMARCA4-202ENST00000413806 KRTAP9-6A0A140TA67 174 aa3.92□□□□□ -1.78
SMARCA4-202ENST00000413806 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
SMARCA4-202ENST00000413806 KRTAP4-9Q9BYQ8 210 aa3.88□□□□□ -1.79
SMARCA4-202ENST00000413806 FSIP2Q5CZC0 6907 aa3.86□□□□□ -1.79
SMARCA4-202ENST00000413806 LCE1DQ5T752 114 aa3.84□□□□□ -1.79
SMARCA4-202ENST00000413806 LCE1BQ5T7P3 118 aa3.84□□□□□ -1.79
SMARCA4-202ENST00000413806 LCE1AQ5T7P2 110 aa3.81□□□□□ -1.8
SMARCA4-202ENST00000413806 KRTAP9-6A8MVA2 160 aa3.79□□□□□ -1.8
SMARCA4-202ENST00000413806 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
SMARCA4-202ENST00000413806 LCE5AQ5TCM9 118 aa3.74□□□□□ -1.81
SMARCA4-202ENST00000413806 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
SMARCA4-202ENST00000413806 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
SMARCA4-202ENST00000413806 KRTAP6-3Q3LI67 103 aa3.7□□□□□ -1.82
SMARCA4-202ENST00000413806 KRTAP9-7A8MTY7 169 aa3.67□□□□□ -1.82
SMARCA4-202ENST00000413806 MUC2Q02817 5179 aa3.64□□□□□ -1.83
SMARCA4-202ENST00000413806 KRTAP20-1Q3LI63 56 aa3.62□□□□□ -1.83
SMARCA4-202ENST00000413806 LCE4AQ5TA78 99 aa3.61□□□□□ -1.83
SMARCA4-202ENST00000413806 SYNE2Q8WXH0 6885 aaKnown RBP3.61□□□□□ -1.83
SMARCA4-202ENST00000413806 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.49□□□□□ -1.85
SMARCA4-202ENST00000413806 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
SMARCA4-202ENST00000413806 OBSCNQ5VST9 7968 aa3.43□□□□□ -1.86
SMARCA4-202ENST00000413806 USH2AO75445 5202 aa3.33□□□□□ -1.88
SMARCA4-202ENST00000413806 MACF1Q9UPN3 7388 aaKnown RBP3.28□□□□□ -1.88
SMARCA4-202ENST00000413806 KRTAP5-9P26371 169 aa3.23□□□□□ -1.89
SMARCA4-202ENST00000413806 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
SMARCA4-202ENST00000413806 LCE1EQ5T753 118 aa3.23□□□□□ -1.89
SMARCA4-202ENST00000413806 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
SMARCA4-202ENST00000413806 DSTQ03001 7570 aaKnown RBP3.22□□□□□ -1.89
SMARCA4-202ENST00000413806 KRTAP4-11Q9BYQ6 195 aa3.18□□□□□ -1.9
SMARCA4-202ENST00000413806 KMT2DO14686 5537 aa3.17□□□□□ -1.9
SMARCA4-202ENST00000413806 FCGBPQ9Y6R7 5405 aaPredicted RBP3.12□□□□□ -1.91
SMARCA4-202ENST00000413806 GPR98Q8WXG9 6306 aa3.1□□□□□ -1.91
SMARCA4-202ENST00000413806 SSPOA2VEC9 5147 aa3.09□□□□□ -1.92
SMARCA4-202ENST00000413806 NEBP20929 6669 aa3.06□□□□□ -1.92
SMARCA4-202ENST00000413806 KRTAP20-2Q3LI61 65 aa3.03□□□□□ -1.92
SMARCA4-202ENST00000413806 KRTAP9-9Q9BYP9 154 aa3.03□□□□□ -1.92
SMARCA4-202ENST00000413806 MDN1Q9NU22 5596 aa3.02□□□□□ -1.93
SMARCA4-202ENST00000413806 KRTAP4-6Q9BYQ5 205 aa3□□□□□ -1.93
SMARCA4-202ENST00000413806 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
SMARCA4-202ENST00000413806 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
SMARCA4-202ENST00000413806 MUC12Q9UKN1 5478 aa2.84□□□□□ -1.95
SMARCA4-202ENST00000413806 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
SMARCA4-202ENST00000413806 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
SMARCA4-202ENST00000413806 KRTAP4-12Q9BQ66 201 aa2.59□□□□□ -1.99
SMARCA4-202ENST00000413806 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -1.99
SMARCA4-202ENST00000413806 KRTAP5-3Q6L8H2 238 aa2.48□□□□□ -2.01
SMARCA4-202ENST00000413806 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
SMARCA4-202ENST00000413806 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
SMARCA4-202ENST00000413806 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
SMARCA4-202ENST00000413806 KRTAP5-2Q701N4 177 aa2.3□□□□□ -2.04
SMARCA4-202ENST00000413806 KRTAP5-10Q6L8G5 202 aa2.29□□□□□ -2.04
SMARCA4-202ENST00000413806 KRTAP5-8O75690 187 aa2.19□□□□□ -2.06
SMARCA4-202ENST00000413806 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
SMARCA4-202ENST00000413806 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
SMARCA4-202ENST00000413806 KRTAP5-1Q6L8H4 278 aa2□□□□□ -2.09
SMARCA4-202ENST00000413806 AHNAKQ09666 5890 aaKnown RBP1.99□□□□□ -2.09
SMARCA4-202ENST00000413806 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
SMARCA4-202ENST00000413806 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
SMARCA4-202ENST00000413806 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
SMARCA4-202ENST00000413806 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
SMARCA4-202ENST00000413806 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
SMARCA4-202ENST00000413806 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 139.9 ms