RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 RPS29P62273 56 aaKnown RBP1.98□□□□□ -2.09
CBX1P3-201ENST00000413296 RPL39P62891 51 aaKnown RBP1.98□□□□□ -2.09
CBX1P3-201ENST00000413296 USH2AO75445 5202 aa1.98□□□□□ -2.09
CBX1P3-201ENST00000413296 FCGBPQ9Y6R7 5405 aaPredicted RBP1.96□□□□□ -2.09
CBX1P3-201ENST00000413296 PRLHP81277 87 aa1.96□□□□□ -2.1
CBX1P3-201ENST00000413296 KRTAP19-2Q3LHN2 52 aa1.96□□□□□ -2.1
CBX1P3-201ENST00000413296 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
CBX1P3-201ENST00000413296 NEBP20929 6669 aa1.95□□□□□ -2.1
CBX1P3-201ENST00000413296 MACF1Q9UPN3 7388 aaKnown RBP1.95□□□□□ -2.1
CBX1P3-201ENST00000413296 SYNE2Q8WXH0 6885 aaKnown RBP1.94□□□□□ -2.1
CBX1P3-201ENST00000413296 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
CBX1P3-201ENST00000413296 GPR98Q8WXG9 6306 aa1.93□□□□□ -2.1
CBX1P3-201ENST00000413296 FLGP20930 4061 aaPredicted RBP1.89□□□□□ -2.11
CBX1P3-201ENST00000413296 C9orf92A6NGG3 77 aa1.89□□□□□ -2.11
CBX1P3-201ENST00000413296 MUC12Q9UKN1 5478 aa1.85□□□□□ -2.11
CBX1P3-201ENST00000413296 MT2AP02795 61 aa1.82□□□□□ -2.12
CBX1P3-201ENST00000413296 KRTAP19-6Q3LI70 58 aa1.82□□□□□ -2.12
CBX1P3-201ENST00000413296 IGLV5-48A0A075B6I7 105 aa1.81□□□□□ -2.12
CBX1P3-201ENST00000413296 S4R3F8 94 aa1.81□□□□□ -2.12
CBX1P3-201ENST00000413296 KMT2DO14686 5537 aa1.81□□□□□ -2.12
CBX1P3-201ENST00000413296 MT1FP04733 61 aa1.79□□□□□ -2.12
CBX1P3-201ENST00000413296 MDN1Q9NU22 5596 aa1.77□□□□□ -2.13
CBX1P3-201ENST00000413296 KRTAP5-1Q6L8H4 278 aa1.76□□□□□ -2.13
CBX1P3-201ENST00000413296 MMP24-AS1A0A0U1RRL7 71 aa1.75□□□□□ -2.13
CBX1P3-201ENST00000413296 KRTAP2-3P0C7H8 128 aa1.74□□□□□ -2.13
CBX1P3-201ENST00000413296 LCE3AQ5TA76 89 aa1.74□□□□□ -2.13
CBX1P3-201ENST00000413296 KRTAP2-4Q9BYR9 128 aa1.74□□□□□ -2.13
CBX1P3-201ENST00000413296 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
CBX1P3-201ENST00000413296 KRTAP5-9P26371 169 aa1.68□□□□□ -2.14
CBX1P3-201ENST00000413296 KRTAP5-5Q701N2 237 aaPredicted RBP1.67□□□□□ -2.14
CBX1P3-201ENST00000413296 KRTAP2-1Q9BYU5 128 aa1.66□□□□□ -2.14
CBX1P3-201ENST00000413296 AHNAK2Q8IVF2 5795 aa1.65□□□□□ -2.15
CBX1P3-201ENST00000413296 KRTAP5-4Q6L8H1 288 aa1.61□□□□□ -2.15
CBX1P3-201ENST00000413296 KRTAP4-4Q9BYR3 166 aa1.61□□□□□ -2.15
CBX1P3-201ENST00000413296 SPRR2EP22531 72 aa1.6□□□□□ -2.15
CBX1P3-201ENST00000413296 SPRR2BP35325 72 aa1.6□□□□□ -2.15
CBX1P3-201ENST00000413296 SPRR2AP35326 72 aa1.6□□□□□ -2.15
CBX1P3-201ENST00000413296 KRTAP19-8Q3LI54 63 aa1.6□□□□□ -2.15
CBX1P3-201ENST00000413296 SPRR2GQ9BYE4 73 aa1.6□□□□□ -2.15
CBX1P3-201ENST00000413296 MT1BP07438 61 aa1.59□□□□□ -2.15
CBX1P3-201ENST00000413296 LCE1CQ5T751 118 aa1.59□□□□□ -2.15
CBX1P3-201ENST00000413296 LCE1BQ5T7P3 118 aa1.59□□□□□ -2.15
CBX1P3-201ENST00000413296 SPRR2FQ96RM1 72 aa1.59□□□□□ -2.15
CBX1P3-201ENST00000413296 SPRR2DP22532 72 aa1.56□□□□□ -2.16
CBX1P3-201ENST00000413296 OBSCNQ5VST9 7968 aa1.55□□□□□ -2.16
CBX1P3-201ENST00000413296 KRTAP5-10Q6L8G5 202 aa1.55□□□□□ -2.16
CBX1P3-201ENST00000413296 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
CBX1P3-201ENST00000413296 KRTAP8-1Q8IUC2 63 aa1.55□□□□□ -2.16
CBX1P3-201ENST00000413296 DSTQ03001 7570 aaKnown RBP1.55□□□□□ -2.16
CBX1P3-201ENST00000413296 AHNAKQ09666 5890 aaKnown RBP1.52□□□□□ -2.17
CBX1P3-201ENST00000413296 KRTAP4-3Q9BYR4 195 aa1.47□□□□□ -2.17
CBX1P3-201ENST00000413296 MT1XP80297 61 aa1.46□□□□□ -2.18
CBX1P3-201ENST00000413296 KRTAP19-3Q7Z4W3 81 aa1.46□□□□□ -2.18
CBX1P3-201ENST00000413296 MUC5BQ9HC84 5762 aaPredicted RBP1.42□□□□□ -2.18
CBX1P3-201ENST00000413296 MUC5ACP98088 5654 aa1.4□□□□□ -2.19
CBX1P3-201ENST00000413296 M0QZ58 72 aa1.4□□□□□ -2.19
CBX1P3-201ENST00000413296 MT4P47944 62 aa1.36□□□□□ -2.19
CBX1P3-201ENST00000413296 PRM1P04553 51 aa1.35□□□□□ -2.19
CBX1P3-201ENST00000413296 MT1GP13640 62 aa1.34□□□□□ -2.19
CBX1P3-201ENST00000413296 KRTAP5-2Q701N4 177 aa1.33□□□□□ -2.2
CBX1P3-201ENST00000413296 MUC19Q7Z5P9 8384 aa1.32□□□□□ -2.2
CBX1P3-201ENST00000413296 MT1EP04732 61 aa1.31□□□□□ -2.2
CBX1P3-201ENST00000413296 KRTAP19-7Q3SYF9 63 aa1.31□□□□□ -2.2
CBX1P3-201ENST00000413296 TNP1P09430 55 aa1.29□□□□□ -2.2
CBX1P3-201ENST00000413296 MT1MQ8N339 61 aa1.26□□□□□ -2.21
CBX1P3-201ENST00000413296 KRTAP19-5Q3LI72 72 aa1.25□□□□□ -2.21
CBX1P3-201ENST00000413296 KRTAP20-2Q3LI61 65 aa1.24□□□□□ -2.21
CBX1P3-201ENST00000413296 MT1LQ93083 61 aa1.23□□□□□ -2.21
CBX1P3-201ENST00000413296 KRTAP5-8O75690 187 aa1.2□□□□□ -2.22
CBX1P3-201ENST00000413296 SYNE1Q8NF91 8797 aaKnown RBP1.16□□□□□ -2.22
CBX1P3-201ENST00000413296 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
CBX1P3-201ENST00000413296 KRTAP21-2Q3LI59 83 aa1.07□□□□□ -2.24
CBX1P3-201ENST00000413296 MT1AP04731 61 aa1.05□□□□□ -2.24
CBX1P3-201ENST00000413296 KRTAP6-2Q3LI66 62 aa1.04□□□□□ -2.24
CBX1P3-201ENST00000413296 KRTAP6-1Q3LI64 71 aa1.03□□□□□ -2.24
CBX1P3-201ENST00000413296 PHGR1C9JFL3 82 aa0.91□□□□□ -2.26
CBX1P3-201ENST00000413296 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 232.9 ms