RNA–Protein interactions for RNA: ENST00000412916.6

CBFB-202, Transcript of core-binding factor subunit beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CBFB, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-202ENST00000412916 CRCT1Q9UGL9 99 aa6.06□□□□□ -1.44
CBFB-202ENST00000412916 SYNE1Q8NF91 8797 aaKnown RBP5.93□□□□□ -1.46
CBFB-202ENST00000412916 MT1GP13640 62 aa5.92□□□□□ -1.46
CBFB-202ENST00000412916 LCE2DQ5TA82 110 aaPredicted RBP5.9□□□□□ -1.46
CBFB-202ENST00000412916 MACF1Q9UPN3 7388 aaKnown RBP5.88□□□□□ -1.47
CBFB-202ENST00000412916 KRTAP2-3P0C7H8 128 aa5.85□□□□□ -1.47
CBFB-202ENST00000412916 KRTAP2-4Q9BYR9 128 aa5.85□□□□□ -1.47
CBFB-202ENST00000412916 KRTAP2-1Q9BYU5 128 aa5.85□□□□□ -1.47
CBFB-202ENST00000412916 KRTAP19-6Q3LI70 58 aa5.84□□□□□ -1.48
CBFB-202ENST00000412916 SYNE2Q8WXH0 6885 aaKnown RBP5.84□□□□□ -1.48
CBFB-202ENST00000412916 OBSCNQ5VST9 7968 aa5.81□□□□□ -1.48
CBFB-202ENST00000412916 MDN1Q9NU22 5596 aa5.79□□□□□ -1.48
CBFB-202ENST00000412916 MT1MQ8N339 61 aa5.7□□□□□ -1.5
CBFB-202ENST00000412916 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
CBFB-202ENST00000412916 SPRR2FQ96RM1 72 aa5.67□□□□□ -1.5
CBFB-202ENST00000412916 KRTAP19-3Q7Z4W3 81 aa5.65□□□□□ -1.51
CBFB-202ENST00000412916 KRTAP4-9Q9BYQ8 210 aa5.56□□□□□ -1.52
CBFB-202ENST00000412916 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
CBFB-202ENST00000412916 LCE5AQ5TCM9 118 aa5.44□□□□□ -1.54
CBFB-202ENST00000412916 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
CBFB-202ENST00000412916 KRTAP6-1Q3LI64 71 aa5.3□□□□□ -1.56
CBFB-202ENST00000412916 KRTAP9-2Q9BYQ4 174 aa5.17□□□□□ -1.58
CBFB-202ENST00000412916 LCE1AQ5T7P2 110 aa5.14□□□□□ -1.59
CBFB-202ENST00000412916 SPRR2EP22531 72 aa5.08□□□□□ -1.6
CBFB-202ENST00000412916 SPRR2BP35325 72 aa5.08□□□□□ -1.6
CBFB-202ENST00000412916 SPRR2AP35326 72 aa5.08□□□□□ -1.6
CBFB-202ENST00000412916 KRTAP4-6Q9BYQ5 205 aa5.06□□□□□ -1.6
CBFB-202ENST00000412916 KRTAP9-7A8MTY7 169 aa5.01□□□□□ -1.61
CBFB-202ENST00000412916 MT1AP04731 61 aa4.99□□□□□ -1.61
CBFB-202ENST00000412916 LCE3DQ9BYE3 92 aa4.97□□□□□ -1.61
CBFB-202ENST00000412916 KRTAP5-5Q701N2 237 aaPredicted RBP4.9□□□□□ -1.62
CBFB-202ENST00000412916 KRTAP5-9P26371 169 aa4.9□□□□□ -1.63
CBFB-202ENST00000412916 PRM1P04553 51 aa4.86□□□□□ -1.63
CBFB-202ENST00000412916 LCE3EQ5T5B0 92 aa4.85□□□□□ -1.63
CBFB-202ENST00000412916 SPRR2DP22532 72 aa4.82□□□□□ -1.64
CBFB-202ENST00000412916 KRTAP6-2Q3LI66 62 aa4.77□□□□□ -1.65
CBFB-202ENST00000412916 KRTAP9-4Q9BYQ2 154 aa4.72□□□□□ -1.65
CBFB-202ENST00000412916 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.62□□□□□ -1.67
CBFB-202ENST00000412916 MT4P47944 62 aa4.5□□□□□ -1.69
CBFB-202ENST00000412916 MT3P25713 68 aa4.48□□□□□ -1.69
CBFB-202ENST00000412916 KRTAP9-6A0A140TA67 174 aa4.47□□□□□ -1.69
CBFB-202ENST00000412916 KRTAP6-3Q3LI67 103 aa4.44□□□□□ -1.7
CBFB-202ENST00000412916 NEBP20929 6669 aa4.38□□□□□ -1.71
CBFB-202ENST00000412916 HMCN1Q96RW7 5635 aa4.34□□□□□ -1.71
CBFB-202ENST00000412916 KRTAP5-4Q6L8H1 288 aa4.22□□□□□ -1.73
CBFB-202ENST00000412916 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
CBFB-202ENST00000412916 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
CBFB-202ENST00000412916 KRTAP20-2Q3LI61 65 aa4.14□□□□□ -1.75
CBFB-202ENST00000412916 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
CBFB-202ENST00000412916 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
CBFB-202ENST00000412916 KRTAP9-9Q9BYP9 154 aa4.04□□□□□ -1.76
CBFB-202ENST00000412916 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.77
CBFB-202ENST00000412916 KRTAP5-2Q701N4 177 aa3.94□□□□□ -1.78
CBFB-202ENST00000412916 KRTAP4-12Q9BQ66 201 aa3.93□□□□□ -1.78
CBFB-202ENST00000412916 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
CBFB-202ENST00000412916 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
CBFB-202ENST00000412916 KRTAP4-2Q9BYR5 136 aa3.81□□□□□ -1.8
CBFB-202ENST00000412916 KRTAP4-11Q9BYQ6 195 aa3.76□□□□□ -1.81
CBFB-202ENST00000412916 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
CBFB-202ENST00000412916 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
CBFB-202ENST00000412916 KRTAP5-10Q6L8G5 202 aa3.6□□□□□ -1.83
CBFB-202ENST00000412916 KRTAP5-1Q6L8H4 278 aa3.48□□□□□ -1.85
CBFB-202ENST00000412916 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.85
CBFB-202ENST00000412916 AHNAK2Q8IVF2 5795 aa3.44□□□□□ -1.86
CBFB-202ENST00000412916 KRTAP4-4Q9BYR3 166 aa3.43□□□□□ -1.86
CBFB-202ENST00000412916 LCE1CQ5T751 118 aa3.36□□□□□ -1.87
CBFB-202ENST00000412916 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
CBFB-202ENST00000412916 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
CBFB-202ENST00000412916 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
CBFB-202ENST00000412916 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.1□□□□□ -1.91
CBFB-202ENST00000412916 KRTAP5-7Q6L8G8 165 aa2.92□□□□□ -1.94
CBFB-202ENST00000412916 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
CBFB-202ENST00000412916 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
CBFB-202ENST00000412916 KRTAP5-11Q6L8G4 156 aa2.86□□□□□ -1.95
CBFB-202ENST00000412916 PHGR1C9JFL3 82 aa2.55□□□□□ -2
CBFB-202ENST00000412916 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
CBFB-202ENST00000412916 MUC16Q8WXI7 14507 aa1.72□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 179.9 ms