RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 K7ERS5 55 aa3.15□□□□□ -1.91
RPE-204ENST00000411934 KMT2DO14686 5537 aa3.15□□□□□ -1.91
RPE-204ENST00000411934 TNP1P09430 55 aa3.14□□□□□ -1.91
RPE-204ENST00000411934 SPRR2EP22531 72 aa3.13□□□□□ -1.91
RPE-204ENST00000411934 SPRR2BP35325 72 aa3.13□□□□□ -1.91
RPE-204ENST00000411934 SPRR2AP35326 72 aa3.13□□□□□ -1.91
RPE-204ENST00000411934 LCE1AQ5T7P2 110 aa3.13□□□□□ -1.91
RPE-204ENST00000411934 C10orf95Q9H7T3 257 aa3.12□□□□□ -1.91
RPE-204ENST00000411934 MUC12Q9UKN1 5478 aa3.11□□□□□ -1.91
RPE-204ENST00000411934 A6NED7 52 aa3.1□□□□□ -1.91
RPE-204ENST00000411934 KRTAP19-7Q3SYF9 63 aa3.08□□□□□ -1.92
RPE-204ENST00000411934 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
RPE-204ENST00000411934 NEBP20929 6669 aa3.06□□□□□ -1.92
RPE-204ENST00000411934 KRTAP25-1Q3LHN0 102 aa3.06□□□□□ -1.92
RPE-204ENST00000411934 MDN1Q9NU22 5596 aa3.06□□□□□ -1.92
RPE-204ENST00000411934 MT1EP04732 61 aa3.05□□□□□ -1.92
RPE-204ENST00000411934 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
RPE-204ENST00000411934 SPRR2DP22532 72 aa3.04□□□□□ -1.92
RPE-204ENST00000411934 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
RPE-204ENST00000411934 CDC42SE1Q9NRR8 79 aa3.03□□□□□ -1.92
RPE-204ENST00000411934 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
RPE-204ENST00000411934 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
RPE-204ENST00000411934 KRTAP19-3Q7Z4W3 81 aa3.02□□□□□ -1.93
RPE-204ENST00000411934 KRTAP23-1A1A580 65 aa3□□□□□ -1.93
RPE-204ENST00000411934 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
RPE-204ENST00000411934 MT1GP13640 62 aa2.97□□□□□ -1.93
RPE-204ENST00000411934 PP632Q6XCG6 107 aa2.97□□□□□ -1.93
RPE-204ENST00000411934 KRTAP2-2Q9BYT5 123 aa2.96□□□□□ -1.94
RPE-204ENST00000411934 KRTAP2-1Q9BYU5 128 aa2.96□□□□□ -1.94
RPE-204ENST00000411934 KRTAP12-3P60328 96 aa2.94□□□□□ -1.94
RPE-204ENST00000411934 MT1LQ93083 61 aa2.94□□□□□ -1.94
RPE-204ENST00000411934 ROMO1P60602 79 aa2.93□□□□□ -1.94
RPE-204ENST00000411934 MT1MQ8N339 61 aa2.89□□□□□ -1.95
RPE-204ENST00000411934 KRTAP4-3Q9BYR4 195 aa2.82□□□□□ -1.96
RPE-204ENST00000411934 A0A0A0MQY5 61 aa2.81□□□□□ -1.96
RPE-204ENST00000411934 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
RPE-204ENST00000411934 BRK1Q8WUW1 75 aa2.8□□□□□ -1.96
RPE-204ENST00000411934 DSTQ03001 7570 aaKnown RBP2.71□□□□□ -1.98
RPE-204ENST00000411934 LCE3CQ5T5A8 94 aa2.71□□□□□ -1.98
RPE-204ENST00000411934 KRTAP5-5Q701N2 237 aaPredicted RBP2.66□□□□□ -1.98
RPE-204ENST00000411934 KRTAP9-6A8MVA2 160 aa2.65□□□□□ -1.99
RPE-204ENST00000411934 PMAIP1Q13794 54 aa2.65□□□□□ -1.99
RPE-204ENST00000411934 PRO0628Q9UI54 55 aa2.61□□□□□ -1.99
RPE-204ENST00000411934 MT4P47944 62 aa2.6□□□□□ -1.99
RPE-204ENST00000411934 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
RPE-204ENST00000411934 KRTAP12-4P60329 112 aa2.56□□□□□ -2
RPE-204ENST00000411934 MT1AP04731 61 aa2.53□□□□□ -2
RPE-204ENST00000411934 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
RPE-204ENST00000411934 KRTAP20-2Q3LI61 65 aa2.52□□□□□ -2.01
RPE-204ENST00000411934 KTN1-AS1Q86SY8 53 aa2.47□□□□□ -2.01
RPE-204ENST00000411934 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
RPE-204ENST00000411934 PRAC1Q96KF2 57 aa2.46□□□□□ -2.02
RPE-204ENST00000411934 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
RPE-204ENST00000411934 SYNE1Q8NF91 8797 aaKnown RBP2.44□□□□□ -2.02
RPE-204ENST00000411934 KRTAP5-10Q6L8G5 202 aa2.41□□□□□ -2.02
RPE-204ENST00000411934 GPR98Q8WXG9 6306 aa2.4□□□□□ -2.03
RPE-204ENST00000411934 MT3P25713 68 aa2.39□□□□□ -2.03
RPE-204ENST00000411934 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
RPE-204ENST00000411934 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
RPE-204ENST00000411934 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
RPE-204ENST00000411934 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
RPE-204ENST00000411934 LUZP6Q538Z0 58 aa2.15□□□□□ -2.07
RPE-204ENST00000411934 NDUFAF8A1L188 74 aa2.07□□□□□ -2.08
RPE-204ENST00000411934 LCE1CQ5T751 118 aa2.04□□□□□ -2.08
RPE-204ENST00000411934 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
RPE-204ENST00000411934 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
RPE-204ENST00000411934 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
RPE-204ENST00000411934 LCE3EQ5T5B0 92 aa1.93□□□□□ -2.1
RPE-204ENST00000411934 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
RPE-204ENST00000411934 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
RPE-204ENST00000411934 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
RPE-204ENST00000411934 KRTAP21-2Q3LI59 83 aa1.63□□□□□ -2.15
RPE-204ENST00000411934 INE1O15225 51 aa1.55□□□□□ -2.16
RPE-204ENST00000411934 PHGR1C9JFL3 82 aa1.5□□□□□ -2.17
RPE-204ENST00000411934 PRM1P04553 51 aa1.47□□□□□ -2.17
RPE-204ENST00000411934 KRTAP21-1Q3LI58 79 aa1.08□□□□□ -2.24
RPE-204ENST00000411934 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 195 ms