RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 ATOX1O00244 68 aa0.77□□□□□ -2.29
RNU6-1140P-201ENST00000410517 MT1XP80297 61 aa0.77□□□□□ -2.29
RNU6-1140P-201ENST00000410517 TRAV22A0A0B4J277 110 aa0.76□□□□□ -2.29
RNU6-1140P-201ENST00000410517 A0A1B0GV72 72 aa0.76□□□□□ -2.29
RNU6-1140P-201ENST00000410517 LOC101927531A0A1B0GV80 90 aa0.76□□□□□ -2.29
RNU6-1140P-201ENST00000410517 COX8AP10176 69 aa0.76□□□□□ -2.29
RNU6-1140P-201ENST00000410517 MT1GP13640 62 aa0.76□□□□□ -2.29
RNU6-1140P-201ENST00000410517 ATXN8Q156A1 80 aa0.76□□□□□ -2.29
RNU6-1140P-201ENST00000410517 SPATA45Q537H7 98 aa0.76□□□□□ -2.29
RNU6-1140P-201ENST00000410517 KRTAP19-3Q7Z4W3 81 aa0.76□□□□□ -2.29
RNU6-1140P-201ENST00000410517 MUC5BQ9HC84 5762 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1140P-201ENST00000410517 M0QZ58 72 aa0.75□□□□□ -2.29
RNU6-1140P-201ENST00000410517 MT-ATP8P03928 68 aa0.75□□□□□ -2.29
RNU6-1140P-201ENST00000410517 S100A1P23297 94 aa0.75□□□□□ -2.29
RNU6-1140P-201ENST00000410517 SMIM20Q8N5G0 67 aa0.75□□□□□ -2.29
RNU6-1140P-201ENST00000410517 SPTSSBQ8NFR3 76 aa0.75□□□□□ -2.29
RNU6-1140P-201ENST00000410517 MT4P47944 62 aa0.74□□□□□ -2.29
RNU6-1140P-201ENST00000410517 UBL5Q9BZL1 73 aa0.74□□□□□ -2.29
RNU6-1140P-201ENST00000410517 MUC5ACP98088 5654 aa0.74□□□□□ -2.29
RNU6-1140P-201ENST00000410517 HSD52Q0P140 79 aa0.73□□□□□ -2.29
RNU6-1140P-201ENST00000410517 CYP4F30PQ9H0H9 118 aa0.73□□□□□ -2.29
RNU6-1140P-201ENST00000410517 A0A087WVE0 104 aa0.72□□□□□ -2.29
RNU6-1140P-201ENST00000410517 ATOH7Q8N100 152 aa0.72□□□□□ -2.29
RNU6-1140P-201ENST00000410517 MT1EP04732 61 aa0.71□□□□□ -2.3
RNU6-1140P-201ENST00000410517 SCGB1A1P11684 91 aa0.71□□□□□ -2.3
RNU6-1140P-201ENST00000410517 C10orf95Q9H7T3 257 aa0.71□□□□□ -2.3
RNU6-1140P-201ENST00000410517 M0R143 59 aa0.7□□□□□ -2.3
RNU6-1140P-201ENST00000410517 UQCRQO14949 82 aa0.7□□□□□ -2.3
RNU6-1140P-201ENST00000410517 MIR22HGQ0VDD5 57 aa0.69□□□□□ -2.3
RNU6-1140P-201ENST00000410517 KRTAP20-2Q3LI61 65 aa0.69□□□□□ -2.3
RNU6-1140P-201ENST00000410517 KRTAP19-7Q3SYF9 63 aa0.69□□□□□ -2.3
RNU6-1140P-201ENST00000410517 MT1MQ8N339 61 aa0.69□□□□□ -2.3
RNU6-1140P-201ENST00000410517 C14orf144Q96I85 54 aa0.69□□□□□ -2.3
RNU6-1140P-201ENST00000410517 K7ERJ3 54 aa0.68□□□□□ -2.3
RNU6-1140P-201ENST00000410517 ATP5EP2Q5VTU8 51 aa0.68□□□□□ -2.3
RNU6-1140P-201ENST00000410517 UQCR10Q9UDW1 63 aa0.68□□□□□ -2.3
RNU6-1140P-201ENST00000410517 A0A0D9SG42 100 aa0.67□□□□□ -2.3
RNU6-1140P-201ENST00000410517 ACYP2P14621 99 aa0.67□□□□□ -2.3
RNU6-1140P-201ENST00000410517 H0Y9P7 68 aa0.66□□□□□ -2.3
RNU6-1140P-201ENST00000410517 RPS28P62857 69 aaKnown RBP0.66□□□□□ -2.3
RNU6-1140P-201ENST00000410517 DMAC1Q96GE9 116 aa0.66□□□□□ -2.3
RNU6-1140P-201ENST00000410517 SYNE1Q8NF91 8797 aaKnown RBP0.66□□□□□ -2.3
RNU6-1140P-201ENST00000410517 CHKB-CPT1BH3BT56 60 aa0.65□□□□□ -2.31
RNU6-1140P-201ENST00000410517 K7EP34 96 aa0.65□□□□□ -2.31
RNU6-1140P-201ENST00000410517 TNP1P09430 55 aa0.65□□□□□ -2.31
RNU6-1140P-201ENST00000410517 MT1LQ93083 61 aa0.65□□□□□ -2.31
RNU6-1140P-201ENST00000410517 LINC00208Q96KT6 92 aa0.65□□□□□ -2.31
RNU6-1140P-201ENST00000410517 SPCS1Q9Y6A9 102 aa0.65□□□□□ -2.31
RNU6-1140P-201ENST00000410517 KRTAP19-5Q3LI72 72 aa0.64□□□□□ -2.31
RNU6-1140P-201ENST00000410517 SPATA8Q6RVD6 105 aa0.64□□□□□ -2.31
RNU6-1140P-201ENST00000410517 SERP1Q9Y6X1 66 aa0.64□□□□□ -2.31
RNU6-1140P-201ENST00000410517 PYY3Q5JQD4 70 aa0.61□□□□□ -2.31
RNU6-1140P-201ENST00000410517 GTF2H5Q6ZYL4 71 aa0.6□□□□□ -2.31
RNU6-1140P-201ENST00000410517 BRK1Q8WUW1 75 aa0.6□□□□□ -2.31
RNU6-1140P-201ENST00000410517 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.31
RNU6-1140P-201ENST00000410517 H7BZZ5 65 aa0.59□□□□□ -2.31
RNU6-1140P-201ENST00000410517 LINC00643Q86TS7 51 aa0.59□□□□□ -2.31
RNU6-1140P-201ENST00000410517 MT1AP04731 61 aa0.58□□□□□ -2.32
RNU6-1140P-201ENST00000410517 SERP2Q8N6R1 65 aa0.58□□□□□ -2.32
RNU6-1140P-201ENST00000410517 J3QR89 54 aa0.57□□□□□ -2.32
RNU6-1140P-201ENST00000410517 PRR15LQ9BU68 103 aa0.57□□□□□ -2.32
RNU6-1140P-201ENST00000410517 SMIM6P0DI80 62 aa0.56□□□□□ -2.32
RNU6-1140P-201ENST00000410517 COL5A1-AS1Q5SY13 56 aa0.56□□□□□ -2.32
RNU6-1140P-201ENST00000410517 CCDC179H3BU77 68 aa0.55□□□□□ -2.32
RNU6-1140P-201ENST00000410517 KRTAP6-2Q3LI66 62 aa0.55□□□□□ -2.32
RNU6-1140P-201ENST00000410517 ETDBQ3ZM63 59 aa0.54□□□□□ -2.32
RNU6-1140P-201ENST00000410517 A0A1B0GU69 56 aa0.53□□□□□ -2.32
RNU6-1140P-201ENST00000410517 KRTAP6-1Q3LI64 71 aa0.53□□□□□ -2.32
RNU6-1140P-201ENST00000410517 UQCR11O14957 56 aa0.5□□□□□ -2.33
RNU6-1140P-201ENST00000410517 PHGR1C9JFL3 82 aa0.48□□□□□ -2.33
RNU6-1140P-201ENST00000410517 K7ERU9 68 aa0.45□□□□□ -2.34
RNU6-1140P-201ENST00000410517 ATP5EP56381 51 aaPredicted RBP0.45□□□□□ -2.34
RNU6-1140P-201ENST00000410517 LINC01558Q9Y6Z2 57 aa0.43□□□□□ -2.34
RNU6-1140P-201ENST00000410517 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
RNU6-1140P-201ENST00000410517 A0A1B0GV90 55 aa0.38□□□□□ -2.35
RNU6-1140P-201ENST00000410517 LOC105371267A0A1B0GV96 52 aa0.35□□□□□ -2.35
RNU6-1140P-201ENST00000410517 PRM1P04553 51 aa0.15□□□□□ -2.39
Retrieved 77 of 20,778 RNA–protein pairs in 135.6 ms