RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 KRTAP2-3P0C7H8 128 aa8.83□□□□□ -1
UBE2E3-202ENST00000410062 KRTAP19-5Q3LI72 72 aa8.83□□□□□ -1
UBE2E3-202ENST00000410062 KRTAP2-4Q9BYR9 128 aa8.83□□□□□ -1
UBE2E3-202ENST00000410062 LCE3AQ5TA76 89 aa8.81□□□□□ -1
UBE2E3-202ENST00000410062 ROMO1P60602 79 aa8.73□□□□□ -1.01
UBE2E3-202ENST00000410062 KRTAP25-1Q3LHN0 102 aa8.72□□□□□ -1.01
UBE2E3-202ENST00000410062 KRTAP19-3Q7Z4W3 81 aa8.69□□□□□ -1.02
UBE2E3-202ENST00000410062 LCE5AQ5TCM9 118 aa8.66□□□□□ -1.02
UBE2E3-202ENST00000410062 LCE3BQ5TA77 95 aa8.59□□□□□ -1.03
UBE2E3-202ENST00000410062 KRTAP2-2Q9BYT5 123 aa8.58□□□□□ -1.04
UBE2E3-202ENST00000410062 KRTAP2-1Q9BYU5 128 aa8.58□□□□□ -1.04
UBE2E3-202ENST00000410062 MT1LQ93083 61 aa8.52□□□□□ -1.05
UBE2E3-202ENST00000410062 MT1GP13640 62 aa8.51□□□□□ -1.05
UBE2E3-202ENST00000410062 KRTAP12-3P60328 96 aa8.46□□□□□ -1.06
UBE2E3-202ENST00000410062 DSTQ03001 7570 aaKnown RBP8.46□□□□□ -1.06
UBE2E3-202ENST00000410062 PP632Q6XCG6 107 aa8.43□□□□□ -1.06
UBE2E3-202ENST00000410062 MT1MQ8N339 61 aa8.39□□□□□ -1.07
UBE2E3-202ENST00000410062 KRTAP23-1A1A580 65 aa8.28□□□□□ -1.08
UBE2E3-202ENST00000410062 KRTAP4-3Q9BYR4 195 aa8.23□□□□□ -1.09
UBE2E3-202ENST00000410062 KRTAP4-7Q9BYR0 210 aa8.16□□□□□ -1.1
UBE2E3-202ENST00000410062 A0A0A0MQY5 61 aa8.07□□□□□ -1.12
UBE2E3-202ENST00000410062 KRTAP15-1Q3LI76 137 aa8.05□□□□□ -1.12
UBE2E3-202ENST00000410062 NDUFAF8A1L188 74 aa8.02□□□□□ -1.13
UBE2E3-202ENST00000410062 KRTAP4-9Q9BYQ8 210 aa7.93□□□□□ -1.14
UBE2E3-202ENST00000410062 KRTAP19-4Q3LI73 84 aa7.92□□□□□ -1.14
UBE2E3-202ENST00000410062 LCE3CQ5T5A8 94 aa7.83□□□□□ -1.16
UBE2E3-202ENST00000410062 LCE4AQ5TA78 99 aa7.83□□□□□ -1.16
UBE2E3-202ENST00000410062 LUZP6Q538Z0 58 aa7.77□□□□□ -1.17
UBE2E3-202ENST00000410062 LCE1DQ5T752 114 aa7.76□□□□□ -1.17
UBE2E3-202ENST00000410062 KRTAP5-4Q6L8H1 288 aa7.76□□□□□ -1.17
UBE2E3-202ENST00000410062 MT4P47944 62 aa7.75□□□□□ -1.17
UBE2E3-202ENST00000410062 LOC100996750A0A140TA64 210 aa7.71□□□□□ -1.17
UBE2E3-202ENST00000410062 KRTAP5-5Q701N2 237 aaPredicted RBP7.65□□□□□ -1.18
UBE2E3-202ENST00000410062 HMCN1Q96RW7 5635 aa7.63□□□□□ -1.19
UBE2E3-202ENST00000410062 KRTAP4-6Q9BYQ5 205 aa7.57□□□□□ -1.2
UBE2E3-202ENST00000410062 GPR98Q8WXG9 6306 aa7.41□□□□□ -1.22
UBE2E3-202ENST00000410062 KRTAP9-6A8MVA2 160 aa7.41□□□□□ -1.22
UBE2E3-202ENST00000410062 KRTAP12-4P60329 112 aa7.35□□□□□ -1.23
UBE2E3-202ENST00000410062 KRTAP20-2Q3LI61 65 aa7.32□□□□□ -1.24
UBE2E3-202ENST00000410062 SYNE1Q8NF91 8797 aaKnown RBP7.31□□□□□ -1.24
UBE2E3-202ENST00000410062 SPRR5A0A1B0GTR4 108 aa7.29□□□□□ -1.24
UBE2E3-202ENST00000410062 MT1AP04731 61 aa7.24□□□□□ -1.25
UBE2E3-202ENST00000410062 KRTAP6-1Q3LI64 71 aa7.2□□□□□ -1.26
UBE2E3-202ENST00000410062 AHNAK2Q8IVF2 5795 aa7.17□□□□□ -1.26
UBE2E3-202ENST00000410062 KRTAP5-3Q6L8H2 238 aa7.08□□□□□ -1.28
UBE2E3-202ENST00000410062 KRTAP5-10Q6L8G5 202 aa7□□□□□ -1.29
UBE2E3-202ENST00000410062 KRTAP9-4Q9BYQ2 154 aa6.96□□□□□ -1.29
UBE2E3-202ENST00000410062 KRTAP5-2Q701N4 177 aa6.87□□□□□ -1.31
UBE2E3-202ENST00000410062 INE1O15225 51 aa6.86□□□□□ -1.31
UBE2E3-202ENST00000410062 KRTAP6-2Q3LI66 62 aa6.81□□□□□ -1.32
UBE2E3-202ENST00000410062 KRTAP5-7Q6L8G8 165 aa6.66□□□□□ -1.34
UBE2E3-202ENST00000410062 MT3P25713 68 aa6.6□□□□□ -1.35
UBE2E3-202ENST00000410062 KRTAP4-11Q9BYQ6 195 aa6.58□□□□□ -1.36
UBE2E3-202ENST00000410062 OBSCNQ5VST9 7968 aa6.48□□□□□ -1.37
UBE2E3-202ENST00000410062 KRTAP5-8O75690 187 aa6.36□□□□□ -1.39
UBE2E3-202ENST00000410062 KRTAP5-1Q6L8H4 278 aa6.1□□□□□ -1.43
UBE2E3-202ENST00000410062 LCE1EQ5T753 118 aa5.95□□□□□ -1.46
UBE2E3-202ENST00000410062 KRTAP9-9Q9BYP9 154 aa5.95□□□□□ -1.46
UBE2E3-202ENST00000410062 MUC5ACP98088 5654 aa5.94□□□□□ -1.46
UBE2E3-202ENST00000410062 MUC5BQ9HC84 5762 aaPredicted RBP5.86□□□□□ -1.47
UBE2E3-202ENST00000410062 AHNAKQ09666 5890 aaKnown RBP5.74□□□□□ -1.49
UBE2E3-202ENST00000410062 LCE3DQ9BYE3 92 aa5.72□□□□□ -1.49
UBE2E3-202ENST00000410062 LCE1BQ5T7P3 118 aa5.63□□□□□ -1.51
UBE2E3-202ENST00000410062 KRTAP4-2Q9BYR5 136 aa5.62□□□□□ -1.51
UBE2E3-202ENST00000410062 LCE1CQ5T751 118 aa5.53□□□□□ -1.52
UBE2E3-202ENST00000410062 LCE3EQ5T5B0 92 aa5.43□□□□□ -1.54
UBE2E3-202ENST00000410062 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.08□□□□□ -1.6
UBE2E3-202ENST00000410062 KRTAP4-12Q9BQ66 201 aa4.99□□□□□ -1.61
UBE2E3-202ENST00000410062 KRTAP5-11Q6L8G4 156 aa4.98□□□□□ -1.61
UBE2E3-202ENST00000410062 KRTAP21-2Q3LI59 83 aa4.73□□□□□ -1.65
UBE2E3-202ENST00000410062 LCE1FQ5T754 118 aa4.73□□□□□ -1.65
UBE2E3-202ENST00000410062 PRM1P04553 51 aa4.32□□□□□ -1.72
UBE2E3-202ENST00000410062 KRTAP4-4Q9BYR3 166 aa4.31□□□□□ -1.72
UBE2E3-202ENST00000410062 PHGR1C9JFL3 82 aa4.3□□□□□ -1.72
UBE2E3-202ENST00000410062 MUC19Q7Z5P9 8384 aa3.94□□□□□ -1.78
UBE2E3-202ENST00000410062 KRTAP21-1Q3LI58 79 aa3.05□□□□□ -1.92
UBE2E3-202ENST00000410062 MUC16Q8WXI7 14507 aa2.74□□□□□ -1.97
Retrieved 77 of 20,778 RNA–protein pairs in 14.5 ms