RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 LCE1FQ5T754 118 aa1.42□□□□□ -2.18
RGPD1-202ENST00000409776 KRTAP19-5Q3LI72 72 aa1.42□□□□□ -2.18
RGPD1-202ENST00000409776 HMCN2Q8NDA2 5059 aa1.41□□□□□ -2.18
RGPD1-202ENST00000409776 SPRR2FQ96RM1 72 aa1.38□□□□□ -2.19
RGPD1-202ENST00000409776 HMCN1Q96RW7 5635 aa1.38□□□□□ -2.19
RGPD1-202ENST00000409776 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.37□□□□□ -2.19
RGPD1-202ENST00000409776 SPRR5A0A1B0GTR4 108 aa1.36□□□□□ -2.19
RGPD1-202ENST00000409776 KRTAP2-2Q9BYT5 123 aa1.36□□□□□ -2.19
RGPD1-202ENST00000409776 SRRM2Q9UQ35 2752 aaKnown RBP1.34□□□□□ -2.19
RGPD1-202ENST00000409776 MUC2Q02817 5179 aa1.34□□□□□ -2.19
RGPD1-202ENST00000409776 MT1GP13640 62 aa1.33□□□□□ -2.2
RGPD1-202ENST00000409776 FAT4Q6V0I7 4981 aa1.3□□□□□ -2.2
RGPD1-202ENST00000409776 MT1HL1P0DM35 61 aa1.3□□□□□ -2.2
RGPD1-202ENST00000409776 SPRR2EP22531 72 aa1.3□□□□□ -2.2
RGPD1-202ENST00000409776 SPRR2BP35325 72 aa1.3□□□□□ -2.2
RGPD1-202ENST00000409776 SPRR2AP35326 72 aa1.3□□□□□ -2.2
RGPD1-202ENST00000409776 LCE1BQ5T7P3 118 aa1.3□□□□□ -2.2
RGPD1-202ENST00000409776 LRP2P98164 4655 aa1.27□□□□□ -2.21
RGPD1-202ENST00000409776 SPRR2DP22532 72 aa1.26□□□□□ -2.21
RGPD1-202ENST00000409776 KRTAP19-8Q3LI54 63 aa1.24□□□□□ -2.21
RGPD1-202ENST00000409776 LCE1CQ5T751 118 aa1.21□□□□□ -2.22
RGPD1-202ENST00000409776 LCE1EQ5T753 118 aa1.21□□□□□ -2.22
RGPD1-202ENST00000409776 KRTAP5-9P26371 169 aa1.2□□□□□ -2.22
RGPD1-202ENST00000409776 USH2AO75445 5202 aa1.17□□□□□ -2.22
RGPD1-202ENST00000409776 SSPOA2VEC9 5147 aa1.17□□□□□ -2.22
RGPD1-202ENST00000409776 AHNAK2Q8IVF2 5795 aa1.14□□□□□ -2.23
RGPD1-202ENST00000409776 KRTAP5-4Q6L8H1 288 aa1.14□□□□□ -2.23
RGPD1-202ENST00000409776 MT2AP02795 61 aa1.13□□□□□ -2.23
RGPD1-202ENST00000409776 KRTAP6-2Q3LI66 62 aa1.13□□□□□ -2.23
RGPD1-202ENST00000409776 KRTAP5-11Q6L8G4 156 aa1.12□□□□□ -2.23
RGPD1-202ENST00000409776 MT1LQ93083 61 aa1.12□□□□□ -2.23
RGPD1-202ENST00000409776 MT4P47944 62 aa1.12□□□□□ -2.23
RGPD1-202ENST00000409776 KRTAP2-3P0C7H8 128 aa1.11□□□□□ -2.23
RGPD1-202ENST00000409776 KRTAP2-4Q9BYR9 128 aa1.11□□□□□ -2.23
RGPD1-202ENST00000409776 KRTAP2-1Q9BYU5 128 aa1.11□□□□□ -2.23
RGPD1-202ENST00000409776 MT1HP80294 61 aa1.1□□□□□ -2.23
RGPD1-202ENST00000409776 KRTAP19-7Q3SYF9 63 aa1.08□□□□□ -2.24
RGPD1-202ENST00000409776 MT1FP04733 61 aa1.08□□□□□ -2.24
RGPD1-202ENST00000409776 KRTAP19-3Q7Z4W3 81 aa1.08□□□□□ -2.24
RGPD1-202ENST00000409776 MT1XP80297 61 aa1.05□□□□□ -2.24
RGPD1-202ENST00000409776 MT1EP04732 61 aa1.05□□□□□ -2.24
RGPD1-202ENST00000409776 KRTAP19-2Q3LHN2 52 aa1.04□□□□□ -2.24
RGPD1-202ENST00000409776 MDN1Q9NU22 5596 aa1.04□□□□□ -2.24
RGPD1-202ENST00000409776 KRTAP9-6A8MVA2 160 aa1.03□□□□□ -2.24
RGPD1-202ENST00000409776 FCGBPQ9Y6R7 5405 aaPredicted RBP1.03□□□□□ -2.24
RGPD1-202ENST00000409776 MT1AP04731 61 aa1.03□□□□□ -2.24
RGPD1-202ENST00000409776 KRTAP4-4Q9BYR3 166 aa1.03□□□□□ -2.25
RGPD1-202ENST00000409776 KRTAP19-6Q3LI70 58 aa1.01□□□□□ -2.25
RGPD1-202ENST00000409776 KRTAP20-2Q3LI61 65 aa1□□□□□ -2.25
RGPD1-202ENST00000409776 MUC5ACP98088 5654 aa1□□□□□ -2.25
RGPD1-202ENST00000409776 KRTAP4-1Q9BYQ7 146 aa1□□□□□ -2.25
RGPD1-202ENST00000409776 MUC12Q9UKN1 5478 aa0.99□□□□□ -2.25
RGPD1-202ENST00000409776 FSIP2Q5CZC0 6907 aa0.99□□□□□ -2.25
RGPD1-202ENST00000409776 KRTAP5-1Q6L8H4 278 aa0.99□□□□□ -2.25
RGPD1-202ENST00000409776 MT1MQ8N339 61 aa0.98□□□□□ -2.25
RGPD1-202ENST00000409776 KRTAP5-5Q701N2 237 aaPredicted RBP0.98□□□□□ -2.25
RGPD1-202ENST00000409776 KRTAP6-3Q3LI67 103 aa0.97□□□□□ -2.25
RGPD1-202ENST00000409776 KRTAP5-8O75690 187 aa0.97□□□□□ -2.25
RGPD1-202ENST00000409776 MT1BP07438 61 aa0.97□□□□□ -2.25
RGPD1-202ENST00000409776 OBSCNQ5VST9 7968 aa0.96□□□□□ -2.26
RGPD1-202ENST00000409776 KRTAP4-3Q9BYR4 195 aa0.92□□□□□ -2.26
RGPD1-202ENST00000409776 GPR98Q8WXG9 6306 aa0.9□□□□□ -2.26
RGPD1-202ENST00000409776 SYNE1Q8NF91 8797 aaKnown RBP0.9□□□□□ -2.27
RGPD1-202ENST00000409776 MACF1Q9UPN3 7388 aaKnown RBP0.9□□□□□ -2.27
RGPD1-202ENST00000409776 KRTAP6-1Q3LI64 71 aa0.86□□□□□ -2.27
RGPD1-202ENST00000409776 SYNE2Q8WXH0 6885 aaKnown RBP0.85□□□□□ -2.27
RGPD1-202ENST00000409776 NEBP20929 6669 aa0.84□□□□□ -2.28
RGPD1-202ENST00000409776 KRTAP20-1Q3LI63 56 aa0.81□□□□□ -2.28
RGPD1-202ENST00000409776 MUC19Q7Z5P9 8384 aa0.8□□□□□ -2.28
RGPD1-202ENST00000409776 DSTQ03001 7570 aaKnown RBP0.79□□□□□ -2.28
RGPD1-202ENST00000409776 AHNAKQ09666 5890 aaKnown RBP0.75□□□□□ -2.29
RGPD1-202ENST00000409776 KRTAP5-7Q6L8G8 165 aa0.74□□□□□ -2.29
RGPD1-202ENST00000409776 KRTAP5-10Q6L8G5 202 aa0.68□□□□□ -2.3
RGPD1-202ENST00000409776 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
RGPD1-202ENST00000409776 KRTAP21-2Q3LI59 83 aa0.57□□□□□ -2.32
RGPD1-202ENST00000409776 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
RGPD1-202ENST00000409776 MUC16Q8WXI7 14507 aa0.44□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 75.1 ms